Definition Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence.
Accession NC_011961
Length 917,738

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The map label for this gene is 221635411

Identifier: 221635411

GI number: 221635411

Start: 5796

End: 5921

Strand: Reverse

Name: 221635411

Synonym: trd_A0005

Alternate gene names: NA

Gene position: 5921-5796 (Counterclockwise)

Preceding gene: 221635412

Following gene: 221635410

Centisome position: 0.65

GC content: 69.05

Gene sequence:

>126_bases
GTGCGGGACGATCGCCCCTGGCTTCCGATCCAGGCTGGAGGTGACATGGGTGCACCGCTCCCGCTCTGCGAGTCCTCTCG
GCATGCTGTCCGCGCTCGCAGTGCGACACGCGTCCTGCTGCGGTAG

Upstream 100 bases:

>100_bases
CTTTCCTTGCTCGCGCTGCTGGCCAGCGGTCTCCTGCCAGCGTCCCGTCGCCAGCCAGCGTGAACACCACTGCGGTACCC
CGTGCACCCGACCAGCACGG

Downstream 100 bases:

>100_bases
AATGCGCCTGTGGAACGTGCGATCCTCCCTCCGCTGGCAAGGCAGAGGGCTGGAACGGGGCGAGTCCGAACAGCATGCAC
GTGCTCGATCGTGTCCGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 41; Mature: 41

Protein sequence:

>41_residues
MRDDRPWLPIQAGGDMGAPLPLCESSRHAVRARSATRVLLR

Sequences:

>Translated_41_residues
MRDDRPWLPIQAGGDMGAPLPLCESSRHAVRARSATRVLLR
>Mature_41_residues
MRDDRPWLPIQAGGDMGAPLPLCESSRHAVRARSATRVLLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4557; Mature: 4557

Theoretical pI: Translated: 11.72; Mature: 11.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDDRPWLPIQAGGDMGAPLPLCESSRHAVRARSATRVLLR
CCCCCCCCEEECCCCCCCCCCCCCCCCCEEHHCCCEEEECC
>Mature Secondary Structure
MRDDRPWLPIQAGGDMGAPLPLCESSRHAVRARSATRVLLR
CCCCCCCCEEECCCCCCCCCCCCCCCCCEEHHCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA