| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is hyuA [H]
Identifier: 221633828
GI number: 221633828
Start: 1866491
End: 1868035
Strand: Reverse
Name: hyuA [H]
Synonym: trd_1855
Alternate gene names: 221633828
Gene position: 1868035-1866491 (Counterclockwise)
Preceding gene: 221633829
Following gene: 221633827
Centisome position: 93.26
GC content: 66.8
Gene sequence:
>1545_bases GTGGCGCGATTGGGCATCGACGTCGGTGGCACGAATACCGACGCGGTCCTTTTGGACCGCAGTGAGGTCCTCGCCTGGGC CAAGGAACCGACGACACCGGACGTGAGCACCGGCATCTTGCGCGTGGTACGCGATGTCCTGGCGCAGGCTCGGATCGCCC CGGACGAGATCCGCGCCGTGATGCTCGGGACAACCCACTTCACCAATGCCGTCGTGCAGCGGCAGGAACTCGCCCGCATC GCCGTGCTCCGCCTCGGTCTTCCAGCGACCGCATCCATCCCACCACTCGAGGATTGGCCCGATGATCTCCGCGATGCCGT CGCGGGATTCATCGCGCTCCTTCCCGGCGGACACCAGTTCGATGGCCGCGAGATCAGTCCGCTGGATCACTCGGCACTGA ACCAGGTCTGCGAACGGATCGCCGAACTGGGAATCAGTTCCGCGGCGGTCACCGCCGTCTTCTCGCCAGCAACATCTGCC CACGAGGATGCGGTGGCCGACTTGCTCGCCAGCCGAGTGCCAGGACTCCGCATCACCCGCTCCCGCGAGATCGGGCGCCT CGGACTTCTCGAACGCGAGAATGCCGCTGCCCTCAATGCCTGCCTGGTGCCACTCGCCGAGCGGACGATCCGGGCGTTCC AGGACGCACTCGCCGAACTCGGGCTGACGGCACCGCTCTACCTCAGCCAGAACGATGGCACGCTCATGACAGCCGATTTC GCCACACGCTATCCTGTCCTCACCTTCGCGTCGGGACCGACCAACTCGATGCGCGGCGCGGCTGTCCTCAGCGGTCTGCG CGATGCCATCGTTCTGGACGTCGGCGGGACGACGACCGATGGTGGTGCCCTGGTCAACGGCTTCCCTCGCGAGGCATCAT TCGCGGTCACGATCGGTGGCGTCCGCACCAACTTTCGCATGCCGGACGTCGTGTCGATCGGGCTGGGCGGGGGTAGTCTT GTCGCGCCGGACGGGCGGAGCGTCGGTCCGCGCAGCGTCGGCTTCCGGCTGATGCAGGAAGCCCGCATCTTCGGTGGCAA CACGCTCACCGCCAGCGATATCGCGGTCGCTGCCGGACGAGCGCGCTTCGGTGATCCGACGCGCGTGGCCGATCTCTCTC CTGTGGTCGTCCAACGAGCTCTCACGATCATCGACCAGCGCCTCGCCGAACTTGTCGATAGCCTCAAGACCTCGGCCGGG CCGGTTCCCGTCATCGTCGTCGGTGGTGGAAGCGTCCTCGTACCGGGCCAACTCGAAGGAGCGAGCGAGGTGATCCGGCC ACCCTACGCGGCAGTCGCCAACGCGATCGGGGCAGCGATCGCCCAGGTGAGCGGCGAAGTCGACCGGATCGTCTCGCTGG AGGGGCAGACGCGGGAGAGCGCATTGGCCGCAGCACGAGCGGACGCCTGCCGAGCAGCCATCGCCGCTGGTGCCGATCCA GCTACCGTGAGCGTGGTGGAGGTCGAAGAAGTACCCATTGCGTATCTGCCCTCGAACGCCGTCCGGATCCGCATCAAAGC AGTTGGGGATCTCCGAGGAGGCTGA
Upstream 100 bases:
>100_bases ACGCTCATCAATGCCGGTATGCTCGGCGTGATCGCTCTCCTGGCCGAAGTGATGGCCATGACCTGGTTCGCACCGGTTCG AGAAACGGGGGCACGACACA
Downstream 100 bases:
>100_bases GGTGATGTGGGAGTTGGACGAGGAGAAGCTGGAGGCCATCACCATCGGGGCAGGCATCTTAGGTACCGGCGGAGGCGGCA ATCCCTATTACGGCAAGCTC
Product: hydantoinase
Products: NA
Alternate protein names: ORF2 [H]
Number of amino acids: Translated: 514; Mature: 513
Protein sequence:
>514_residues MARLGIDVGGTNTDAVLLDRSEVLAWAKEPTTPDVSTGILRVVRDVLAQARIAPDEIRAVMLGTTHFTNAVVQRQELARI AVLRLGLPATASIPPLEDWPDDLRDAVAGFIALLPGGHQFDGREISPLDHSALNQVCERIAELGISSAAVTAVFSPATSA HEDAVADLLASRVPGLRITRSREIGRLGLLERENAAALNACLVPLAERTIRAFQDALAELGLTAPLYLSQNDGTLMTADF ATRYPVLTFASGPTNSMRGAAVLSGLRDAIVLDVGGTTTDGGALVNGFPREASFAVTIGGVRTNFRMPDVVSIGLGGGSL VAPDGRSVGPRSVGFRLMQEARIFGGNTLTASDIAVAAGRARFGDPTRVADLSPVVVQRALTIIDQRLAELVDSLKTSAG PVPVIVVGGGSVLVPGQLEGASEVIRPPYAAVANAIGAAIAQVSGEVDRIVSLEGQTRESALAAARADACRAAIAAGADP ATVSVVEVEEVPIAYLPSNAVRIRIKAVGDLRGG
Sequences:
>Translated_514_residues MARLGIDVGGTNTDAVLLDRSEVLAWAKEPTTPDVSTGILRVVRDVLAQARIAPDEIRAVMLGTTHFTNAVVQRQELARI AVLRLGLPATASIPPLEDWPDDLRDAVAGFIALLPGGHQFDGREISPLDHSALNQVCERIAELGISSAAVTAVFSPATSA HEDAVADLLASRVPGLRITRSREIGRLGLLERENAAALNACLVPLAERTIRAFQDALAELGLTAPLYLSQNDGTLMTADF ATRYPVLTFASGPTNSMRGAAVLSGLRDAIVLDVGGTTTDGGALVNGFPREASFAVTIGGVRTNFRMPDVVSIGLGGGSL VAPDGRSVGPRSVGFRLMQEARIFGGNTLTASDIAVAAGRARFGDPTRVADLSPVVVQRALTIIDQRLAELVDSLKTSAG PVPVIVVGGGSVLVPGQLEGASEVIRPPYAAVANAIGAAIAQVSGEVDRIVSLEGQTRESALAAARADACRAAIAAGADP ATVSVVEVEEVPIAYLPSNAVRIRIKAVGDLRGG >Mature_513_residues ARLGIDVGGTNTDAVLLDRSEVLAWAKEPTTPDVSTGILRVVRDVLAQARIAPDEIRAVMLGTTHFTNAVVQRQELARIA VLRLGLPATASIPPLEDWPDDLRDAVAGFIALLPGGHQFDGREISPLDHSALNQVCERIAELGISSAAVTAVFSPATSAH EDAVADLLASRVPGLRITRSREIGRLGLLERENAAALNACLVPLAERTIRAFQDALAELGLTAPLYLSQNDGTLMTADFA TRYPVLTFASGPTNSMRGAAVLSGLRDAIVLDVGGTTTDGGALVNGFPREASFAVTIGGVRTNFRMPDVVSIGLGGGSLV APDGRSVGPRSVGFRLMQEARIFGGNTLTASDIAVAAGRARFGDPTRVADLSPVVVQRALTIIDQRLAELVDSLKTSAGP VPVIVVGGGSVLVPGQLEGASEVIRPPYAAVANAIGAAIAQVSGEVDRIVSLEGQTRESALAAARADACRAAIAAGADPA TVSVVEVEEVPIAYLPSNAVRIRIKAVGDLRGG
Specific function: HyuA and hyuB convert D- and L-substituted hydantoins to corresponding N-carbamyl-amino acids [H]
COG id: COG0145
COG function: function code EQ; N-methylhydantoinase A/acetone carboxylase, beta subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oxoprolinase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008040 - InterPro: IPR002821 [H]
Pfam domain/function: PF05378 Hydant_A_N; PF01968 Hydantoinase_A [H]
EC number: NA
Molecular weight: Translated: 53212; Mature: 53081
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARLGIDVGGTNTDAVLLDRSEVLAWAKEPTTPDVSTGILRVVRDVLAQARIAPDEIRAV CCEEEEEECCCCCCEEEEEHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHEEE MLGTTHFTNAVVQRQELARIAVLRLGLPATASIPPLEDWPDDLRDAVAGFIALLPGGHQF EECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC DGREISPLDHSALNQVCERIAELGISSAAVTAVFSPATSAHEDAVADLLASRVPGLRITR CCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHEEECCCCCCHHHHHHHHHHHCCCCCEEEC SREIGRLGLLERENAAALNACLVPLAERTIRAFQDALAELGLTAPLYLSQNDGTLMTADF CCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEECC ATRYPVLTFASGPTNSMRGAAVLSGLRDAIVLDVGGTTTDGGALVNGFPREASFAVTIGG CCCCCEEEECCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCEECCCCCCCEEEEEECC VRTNFRMPDVVSIGLGGGSLVAPDGRSVGPRSVGFRLMQEARIFGGNTLTASDIAVAAGR EEECCCCCCEEEEECCCCCEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHCCCC ARFGDPTRVADLSPVVVQRALTIIDQRLAELVDSLKTSAGPVPVIVVGGGSVLVPGQLEG CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEECCCCCC ASEVIRPPYAAVANAIGAAIAQVSGEVDRIVSLEGQTRESALAAARADACRAAIAAGADP CHHHHCCCHHHHHHHHHHHHHHHCCCHHHEEECCCCCHHHHHHHHHHHHHHHHHHCCCCC ATVSVVEVEEVPIAYLPSNAVRIRIKAVGDLRGG CEEEEEEECCCCEEEECCCEEEEEEEEECCCCCC >Mature Secondary Structure ARLGIDVGGTNTDAVLLDRSEVLAWAKEPTTPDVSTGILRVVRDVLAQARIAPDEIRAV CEEEEEECCCCCCEEEEEHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHEEE MLGTTHFTNAVVQRQELARIAVLRLGLPATASIPPLEDWPDDLRDAVAGFIALLPGGHQF EECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC DGREISPLDHSALNQVCERIAELGISSAAVTAVFSPATSAHEDAVADLLASRVPGLRITR CCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHEEECCCCCCHHHHHHHHHHHCCCCCEEEC SREIGRLGLLERENAAALNACLVPLAERTIRAFQDALAELGLTAPLYLSQNDGTLMTADF CCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEECC ATRYPVLTFASGPTNSMRGAAVLSGLRDAIVLDVGGTTTDGGALVNGFPREASFAVTIGG CCCCCEEEECCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCEECCCCCCCEEEEEECC VRTNFRMPDVVSIGLGGGSLVAPDGRSVGPRSVGFRLMQEARIFGGNTLTASDIAVAAGR EEECCCCCCEEEEECCCCCEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHCCCC ARFGDPTRVADLSPVVVQRALTIIDQRLAELVDSLKTSAGPVPVIVVGGGSVLVPGQLEG CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEECCCCCC ASEVIRPPYAAVANAIGAAIAQVSGEVDRIVSLEGQTRESALAAARADACRAAIAAGADP CHHHHCCCHHHHHHHHHHHHHHHCCCHHHEEECCCCCHHHHHHHHHHHHHHHHHHCCCCC ATVSVVEVEEVPIAYLPSNAVRIRIKAVGDLRGG CEEEEEEECCCCEEEECCCEEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1732229 [H]