Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is 221633827

Identifier: 221633827

GI number: 221633827

Start: 1865350

End: 1866486

Strand: Reverse

Name: 221633827

Synonym: trd_1853

Alternate gene names: NA

Gene position: 1866486-1865350 (Counterclockwise)

Preceding gene: 221633828

Following gene: 221633825

Centisome position: 93.18

GC content: 67.28

Gene sequence:

>1137_bases
ATGTGGGAGTTGGACGAGGAGAAGCTGGAGGCCATCACCATCGGGGCAGGCATCTTAGGTACCGGCGGAGGCGGCAATCC
CTATTACGGCAAGCTCTATGTCCGGCGCTTGCTGCGGGAAGGACGACGCGTCACCATCGTTTCTCCCGAAGACGTTCCAG
ACGATGCCTTGGTCGTCTCGGTCGGGGGAATGGGTGCACCGACGATCGGCATCGAGCGGATCCATCGCGGCGACGAACCA
CTGGCAGCCTTGCGCGCGCTGGAGGCGCACCTCGGCCGGCGCGCGACCCATCTCGTTCCGGGGGAGATCGGGGGAGCGAA
CGCGCTCCGGCCGATGGCCGTCGCGGCCCTCGCTGATCTGCCAGTGGTGGACGGTGACGGGATGGGACGCGCCTTCCCGG
AACTCCAGATGGATACCTTCGCGATTTACGGAGTCCCCGCGACACCGGCGGCCTTGGCCGATATCTTTCACAACCTCGTC
GTCTTTCCCTGGCTGCAGGACGCCGTGACGCTGGAACGCTACGCTCGGGCCGTCACCGTTCAGATGGGCGGGGCAGCCGG
CTTCGCCTTTCCCGCCATGAGCGGGGCGGACCTGCGCCGGACCGTGATTCCCTACACGGTGACGTTGGCCCTTCGACTCG
GGGAGGCAGTGCTCCGAGCCCGCCGCGAGCACCATGACCCGATCGCCGCAGCGCTCGCGGTCACCGGTGGGTGCGTCCTC
TTCCGCGGCAAGGTGATCGACGTGGAGCGCCGGTTAGCCGCCGGGTTCGCCCGGGGGGTCGTTCGGCTCGAGGGGCTCGC
CGAGGACCGTGGGAGCGAACTCCGCATCGATTTCCAGAACGAGAACTTGATCGCTCGCCGCGACGGTGAAGTCCTCGCGG
TCGTCCCGGACCTCATCTGTCTCGTCGATCAGGAGACAGCCGAACCAGTCACGACCGAGGTGGTTCGCTACGGCCTGCGC
GTCGTGGTCCTCGGTATCCCAGCACCAACACTGCTGCGGACACCGGAGGCACTCGCGGTGGTCGGGCCACAGGCCTTCGG
CTATCGCGACGTCGTGTACCGTCCGTTACCGGGCCTCTACGGGGGAGACCGCATCGCGGCCGAGCGACGCGCTGATGCGC
TCAGGAAACCGCGTTGA

Upstream 100 bases:

>100_bases
AGCGTGGTGGAGGTCGAAGAAGTACCCATTGCGTATCTGCCCTCGAACGCCGTCCGGATCCGCATCAAAGCAGTTGGGGA
TCTCCGAGGAGGCTGAGGTG

Downstream 100 bases:

>100_bases
CGAGCATCATGCGCAAGAGATAGATCAGCAACAGGGCGACGAGCGGCGAGAAATCGATGAAGCCGGTGCGGGGCATGACG
CGGCGGATCGGTGCGATGAT

Product: putative hydantoinase

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MWELDEEKLEAITIGAGILGTGGGGNPYYGKLYVRRLLREGRRVTIVSPEDVPDDALVVSVGGMGAPTIGIERIHRGDEP
LAALRALEAHLGRRATHLVPGEIGGANALRPMAVAALADLPVVDGDGMGRAFPELQMDTFAIYGVPATPAALADIFHNLV
VFPWLQDAVTLERYARAVTVQMGGAAGFAFPAMSGADLRRTVIPYTVTLALRLGEAVLRARREHHDPIAAALAVTGGCVL
FRGKVIDVERRLAAGFARGVVRLEGLAEDRGSELRIDFQNENLIARRDGEVLAVVPDLICLVDQETAEPVTTEVVRYGLR
VVVLGIPAPTLLRTPEALAVVGPQAFGYRDVVYRPLPGLYGGDRIAAERRADALRKPR

Sequences:

>Translated_378_residues
MWELDEEKLEAITIGAGILGTGGGGNPYYGKLYVRRLLREGRRVTIVSPEDVPDDALVVSVGGMGAPTIGIERIHRGDEP
LAALRALEAHLGRRATHLVPGEIGGANALRPMAVAALADLPVVDGDGMGRAFPELQMDTFAIYGVPATPAALADIFHNLV
VFPWLQDAVTLERYARAVTVQMGGAAGFAFPAMSGADLRRTVIPYTVTLALRLGEAVLRARREHHDPIAAALAVTGGCVL
FRGKVIDVERRLAAGFARGVVRLEGLAEDRGSELRIDFQNENLIARRDGEVLAVVPDLICLVDQETAEPVTTEVVRYGLR
VVVLGIPAPTLLRTPEALAVVGPQAFGYRDVVYRPLPGLYGGDRIAAERRADALRKPR
>Mature_378_residues
MWELDEEKLEAITIGAGILGTGGGGNPYYGKLYVRRLLREGRRVTIVSPEDVPDDALVVSVGGMGAPTIGIERIHRGDEP
LAALRALEAHLGRRATHLVPGEIGGANALRPMAVAALADLPVVDGDGMGRAFPELQMDTFAIYGVPATPAALADIFHNLV
VFPWLQDAVTLERYARAVTVQMGGAAGFAFPAMSGADLRRTVIPYTVTLALRLGEAVLRARREHHDPIAAALAVTGGCVL
FRGKVIDVERRLAAGFARGVVRLEGLAEDRGSELRIDFQNENLIARRDGEVLAVVPDLICLVDQETAEPVTTEVVRYGLR
VVVLGIPAPTLLRTPEALAVVGPQAFGYRDVVYRPLPGLYGGDRIAAERRADALRKPR

Specific function: Unknown

COG id: COG3535

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40533; Mature: 40533

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWELDEEKLEAITIGAGILGTGGGGNPYYGKLYVRRLLREGRRVTIVSPEDVPDDALVVS
CCCCCCHHEEEEEECCCEEECCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEE
VGGMGAPTIGIERIHRGDEPLAALRALEAHLGRRATHLVPGEIGGANALRPMAVAALADL
ECCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHCC
PVVDGDGMGRAFPELQMDTFAIYGVPATPAALADIFHNLVVFPWLQDAVTLERYARAVTV
CEECCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHEEHHHHHHHHHHHHHHHEEEE
QMGGAAGFAFPAMSGADLRRTVIPYTVTLALRLGEAVLRARREHHDPIAAALAVTGGCVL
EECCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEE
FRGKVIDVERRLAAGFARGVVRLEGLAEDRGSELRIDFQNENLIARRDGEVLAVVPDLIC
EECEEEEHHHHHHHHHHHHHHHEECHHCCCCCEEEEEECCCCEEEECCCCEEEECCHHHE
LVDQETAEPVTTEVVRYGLRVVVLGIPAPTLLRTPEALAVVGPQAFGYRDVVYRPLPGLY
EECCCCCCHHHHHHHHCCEEEEEEECCCHHHHCCCCCEEEECCCCCCCHHHHCCCCCCCC
GGDRIAAERRADALRKPR
CCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MWELDEEKLEAITIGAGILGTGGGGNPYYGKLYVRRLLREGRRVTIVSPEDVPDDALVVS
CCCCCCHHEEEEEECCCEEECCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEE
VGGMGAPTIGIERIHRGDEPLAALRALEAHLGRRATHLVPGEIGGANALRPMAVAALADL
ECCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHCC
PVVDGDGMGRAFPELQMDTFAIYGVPATPAALADIFHNLVVFPWLQDAVTLERYARAVTV
CEECCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHEEHHHHHHHHHHHHHHHEEEE
QMGGAAGFAFPAMSGADLRRTVIPYTVTLALRLGEAVLRARREHHDPIAAALAVTGGCVL
EECCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEE
FRGKVIDVERRLAAGFARGVVRLEGLAEDRGSELRIDFQNENLIARRDGEVLAVVPDLIC
EECEEEEHHHHHHHHHHHHHHHEECHHCCCCCEEEEEECCCCEEEECCCCEEEECCHHHE
LVDQETAEPVTTEVVRYGLRVVVLGIPAPTLLRTPEALAVVGPQAFGYRDVVYRPLPGLY
EECCCCCCHHHHHHHHCCEEEEEEECCCHHHHCCCCCEEEECCCCCCCHHHHCCCCCCCC
GGDRIAAERRADALRKPR
CCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA