| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is ubiG [H]
Identifier: 221633822
GI number: 221633822
Start: 1861147
End: 1861947
Strand: Reverse
Name: ubiG [H]
Synonym: trd_1849
Alternate gene names: 221633822
Gene position: 1861947-1861147 (Counterclockwise)
Preceding gene: 221633824
Following gene: 221633821
Centisome position: 92.96
GC content: 64.67
Gene sequence:
>801_bases ATGATCCGGCGACCAACCACGGAACGTGTAACGCCGAAAAGTTGGGCTCTGCGCGTTACCTATTGGCAAAGCCTGGCAGC GTACCGCTGGGTGAGCCAGCTGGCCACTGGTGCGTCCGTGCTCGACATCGGTTGTGGAGAGGGATACGGGACAGCTGAAC TGGCCCGAACTGCTCGGCTGGTCATCGGCCTCGACCTCGATCTCCCCACGCTCGAGCACGCACGTCGCCGGTATCCGGCC GCGAACCTCACCTGGGTTCGTGCCTCGGCTGAACGCCTCCCGTTCCGTGCCGCCTCGTTCCAGCTCATCTGCTGTTTCCA GGTTCTCGAGCACCTGCCGGATCCGGAATGCCTCCTCCGCGAGGCACGTCGCGTCCTCGTTCCTGGGGGGCGCCTGATCC TCACGACTCCCAATCGGCCAGCCGTTTTCAGTGGGCTGAACCCCCACCACGCCCGGGAATACGACGAAGCGAGCCTGCGA GCGCTGGTCACCAGCATCTTTCCGCGAGTCGACCTCCTGGGGGTGTTCCCGAGCACGCGGGTCCTCGCCTACCGCACAGC CAATCGCCGACTCGTCGAGCGCATTCTTCGCCTCGATCGGTTCGGGTTGCACCGGCATCTACCGACCGAACTCCGCGCGT TCCTGCACGCAGTCGGTACGCTCGCCGTCCGCCATTGGCTCAACCAGCGCCAGCGCGAACTCGTCACCACCATCGGCATC GACGACTTCCGCATCGCAGCAGGTGATCTGGCACAAGCGATCGATCTCGTCGCGATCGCACGTGACGAGAGAGACGAGTG A
Upstream 100 bases:
>100_bases GGCAAAACGAAATCCGACACTGTTGACTCCTTTCGCTCCATGATGCCGCCGGCAAGGATAGCAGCCCGGTGACCTGGCTC ACGAGAGAGGACAATCCGCG
Downstream 100 bases:
>100_bases CCGTTCGGCAATCTCGACCTTCCCTCTTGACGAACGGGTACTTCAGGACTGACAATGAGACCGAGCGATTCGCACGACGC AGAACCGTCGGCAGAAGGGA
Product: glycosyl transferase
Products: NA
Alternate protein names: 3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase; DHHB methyltransferase [H]
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MIRRPTTERVTPKSWALRVTYWQSLAAYRWVSQLATGASVLDIGCGEGYGTAELARTARLVIGLDLDLPTLEHARRRYPA ANLTWVRASAERLPFRAASFQLICCFQVLEHLPDPECLLREARRVLVPGGRLILTTPNRPAVFSGLNPHHAREYDEASLR ALVTSIFPRVDLLGVFPSTRVLAYRTANRRLVERILRLDRFGLHRHLPTELRAFLHAVGTLAVRHWLNQRQRELVTTIGI DDFRIAAGDLAQAIDLVAIARDERDE
Sequences:
>Translated_266_residues MIRRPTTERVTPKSWALRVTYWQSLAAYRWVSQLATGASVLDIGCGEGYGTAELARTARLVIGLDLDLPTLEHARRRYPA ANLTWVRASAERLPFRAASFQLICCFQVLEHLPDPECLLREARRVLVPGGRLILTTPNRPAVFSGLNPHHAREYDEASLR ALVTSIFPRVDLLGVFPSTRVLAYRTANRRLVERILRLDRFGLHRHLPTELRAFLHAVGTLAVRHWLNQRQRELVTTIGI DDFRIAAGDLAQAIDLVAIARDERDE >Mature_266_residues MIRRPTTERVTPKSWALRVTYWQSLAAYRWVSQLATGASVLDIGCGEGYGTAELARTARLVIGLDLDLPTLEHARRRYPA ANLTWVRASAERLPFRAASFQLICCFQVLEHLPDPECLLREARRVLVPGGRLILTTPNRPAVFSGLNPHHAREYDEASLR ALVTSIFPRVDLLGVFPSTRVLAYRTANRRLVERILRLDRFGLHRHLPTELRAFLHAVGTLAVRHWLNQRQRELVTTIGI DDFRIAAGDLAQAIDLVAIARDERDE
Specific function: Ubiquinone biosynthesis. [C]
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. UbiG/COQ3 family [H]
Homologues:
Organism=Escherichia coli, GI1788564, Length=106, Percent_Identity=31.1320754716981, Blast_Score=68, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 - InterPro: IPR010233 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: =2.1.1.64 [H]
Molecular weight: Translated: 30139; Mature: 30139
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRRPTTERVTPKSWALRVTYWQSLAAYRWVSQLATGASVLDIGCGEGYGTAELARTARL CCCCCCCCCCCCCHHEEEHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHE VIGLDLDLPTLEHARRRYPAANLTWVRASAERLPFRAASFQLICCFQVLEHLPDPECLLR EEEECCCCCHHHHHHHHCCCCCEEEEECHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHH EARRVLVPGGRLILTTPNRPAVFSGLNPHHAREYDEASLRALVTSIFPRVDLLGVFPSTR HHHHEECCCCEEEEECCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHCCHHEEECCCCCE VLAYRTANRRLVERILRLDRFGLHRHLPTELRAFLHAVGTLAVRHWLNQRQRELVTTIGI EEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DDFRIAAGDLAQAIDLVAIARDERDE CCCEECHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MIRRPTTERVTPKSWALRVTYWQSLAAYRWVSQLATGASVLDIGCGEGYGTAELARTARL CCCCCCCCCCCCCHHEEEHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHE VIGLDLDLPTLEHARRRYPAANLTWVRASAERLPFRAASFQLICCFQVLEHLPDPECLLR EEEECCCCCHHHHHHHHCCCCCEEEEECHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHH EARRVLVPGGRLILTTPNRPAVFSGLNPHHAREYDEASLRALVTSIFPRVDLLGVFPSTR HHHHEECCCCEEEEECCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHCCHHEEECCCCCE VLAYRTANRRLVERILRLDRFGLHRHLPTELRAFLHAVGTLAVRHWLNQRQRELVTTIGI EEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DDFRIAAGDLAQAIDLVAIARDERDE CCCEECHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA