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The map label for this gene is sgcX [C]

Identifier: 221633824

GI number: 221633824

Start: 1862922

End: 1863983

Strand: Reverse

Name: sgcX [C]

Synonym: trd_1851

Alternate gene names: 221633824

Gene position: 1863983-1862922 (Counterclockwise)

Preceding gene: 221633825

Following gene: 221633822

Centisome position: 93.06

GC content: 66.01

Gene sequence:

>1062_bases
ATGCTGCGCGACGAGCAGAAATCGTTCTTGCTGCGGTTGCTGGAGGCCCCCAGCCCCTCCGGTTTCGAGGAAGCGGCAGC
GCGCATCTGGCGCGAGGAAGCCAGCTGCTTCGCCGATGACGTCTGGGTCGATCACAACGGCAACAGCTACGCCCGCTTGA
GGGCGGACACCCCGACCGTCCTCATCGAAGGCCATATCGACGAGATCGGACTCATGGTCACCCACATCGACGACCAGGGA
TTCCTCTGGTTCCGCGCCATCGGCGGCTGGGATGACCAGATCTTGACCGGGCAACGAGTCCGCATCCTCACCAGACAAGG
CCCGATCCTCGGCGTCATCGGGCGCAAACCAGCGCACCTGCTGTCGGAGGAAGAAAAGGGGCGTGCAAGCCGAATCAAGG
ATCTGTGGATCGATATCGGTGCGCGCGATGGCAACGAGGCACGAGAAGTCGTCCGGGTCGGTGACCCGATCGTCATCGAG
CAACCGCCCATCGAATTGCGGAACGGCCGGCTGGTGGCGCGTGGGCTGGACAACCGGATGGGTGCCTTCATCGCGCTGGA
GGCGCTGCGGGCGCTCGCCGCTGAGCGCCCGCCCCTGGATGTCGTTGCGCTCGCTGCGACGCAGGAAGAGATCAGCTTCC
TCGGTGCGCGGGCAGCCGCCTTTAGGCTGGAACCGATCGTGGCGATCGTCATCGACGTGACGCACGCGACCGATCATCCG
GATGCCGACAAGCGGGGCGGCGGCGACGTCCGTATCGGCGGGGGTCCCGTCCTGGACCGCGGCTCGATGGTTCATCCACT
CGTCTTCGAGCGCTTGTTGGCGGCAGCCGAAGCGGAAGGGATCACAGTCACGCTCTCCGCTGCTCCGACCCGGACCGGGA
CCGATGCGGATGCCATCGCGCCGGCGCGGGCCGGTATTCCTTGCGGGCTCGTCTCGGTTCCCAACCGCTACATGCACTCG
CCGAACGAGTTAGTGAGCCTGGACGACCTCGACGCCGCGATCCGCCTCATCGCTCGCTTCGTCCGGGACCTCGGATCGAG
CCCAGATTTCCGCCGGCAGTGA

Upstream 100 bases:

>100_bases
CTCTATCTCGCTTTGACGAACGTCTGCAACGTGTTGAACGGACGACCACCGCACCATCAGGTCAATACGGACGTTCGTAT
CGGCAACTGAGGAGGCAGGG

Downstream 100 bases:

>100_bases
GCGCACTCAGGCCGGCGTCCAGAGCTCGACTTCCAGATCGTCGTAGTCGCGCGTGCGGGCTCCCTCGCCGAGTGGACCTT
GCAAGCCACGCTCGATCGGG

Product: putative peptidase

Products: D-glucose; GDP

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MLRDEQKSFLLRLLEAPSPSGFEEAAARIWREEASCFADDVWVDHNGNSYARLRADTPTVLIEGHIDEIGLMVTHIDDQG
FLWFRAIGGWDDQILTGQRVRILTRQGPILGVIGRKPAHLLSEEEKGRASRIKDLWIDIGARDGNEAREVVRVGDPIVIE
QPPIELRNGRLVARGLDNRMGAFIALEALRALAAERPPLDVVALAATQEEISFLGARAAAFRLEPIVAIVIDVTHATDHP
DADKRGGGDVRIGGGPVLDRGSMVHPLVFERLLAAAEAEGITVTLSAAPTRTGTDADAIAPARAGIPCGLVSVPNRYMHS
PNELVSLDDLDAAIRLIARFVRDLGSSPDFRRQ

Sequences:

>Translated_353_residues
MLRDEQKSFLLRLLEAPSPSGFEEAAARIWREEASCFADDVWVDHNGNSYARLRADTPTVLIEGHIDEIGLMVTHIDDQG
FLWFRAIGGWDDQILTGQRVRILTRQGPILGVIGRKPAHLLSEEEKGRASRIKDLWIDIGARDGNEAREVVRVGDPIVIE
QPPIELRNGRLVARGLDNRMGAFIALEALRALAAERPPLDVVALAATQEEISFLGARAAAFRLEPIVAIVIDVTHATDHP
DADKRGGGDVRIGGGPVLDRGSMVHPLVFERLLAAAEAEGITVTLSAAPTRTGTDADAIAPARAGIPCGLVSVPNRYMHS
PNELVSLDDLDAAIRLIARFVRDLGSSPDFRRQ
>Mature_353_residues
MLRDEQKSFLLRLLEAPSPSGFEEAAARIWREEASCFADDVWVDHNGNSYARLRADTPTVLIEGHIDEIGLMVTHIDDQG
FLWFRAIGGWDDQILTGQRVRILTRQGPILGVIGRKPAHLLSEEEKGRASRIKDLWIDIGARDGNEAREVVRVGDPIVIE
QPPIELRNGRLVARGLDNRMGAFIALEALRALAAERPPLDVVALAATQEEISFLGARAAAFRLEPIVAIVIDVTHATDHP
DADKRGGGDVRIGGGPVLDRGSMVHPLVFERLLAAAEAEGITVTLSAAPTRTGTDADAIAPARAGIPCGLVSVPNRYMHS
PNELVSLDDLDAAIRLIARFVRDLGSSPDFRRQ

Specific function: Unknown

COG id: COG1363

COG function: function code G; Cellulase M and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M42 family [H]

Homologues:

Organism=Escherichia coli, GI87082417, Length=343, Percent_Identity=34.1107871720117, Blast_Score=169, Evalue=3e-43,
Organism=Escherichia coli, GI1790332, Length=341, Percent_Identity=30.4985337243402, Blast_Score=144, Evalue=1e-35,
Organism=Escherichia coli, GI1788727, Length=342, Percent_Identity=27.7777777777778, Blast_Score=96, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008007 [H]

Pfam domain/function: PF05343 Peptidase_M42 [H]

EC number: 3.2.1.4

Molecular weight: Translated: 38444; Mature: 38444

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRDEQKSFLLRLLEAPSPSGFEEAAARIWREEASCFADDVWVDHNGNSYARLRADTPTV
CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCEEEEECCCCEE
LIEGHIDEIGLMVTHIDDQGFLWFRAIGGWDDQILTGQRVRILTRQGPILGVIGRKPAHL
EEECCCCCEEEEEEEECCCCEEEEEEECCCCCCEECCCEEEEEEECCCEEEECCCCCHHH
LSEEEKGRASRIKDLWIDIGARDGNEAREVVRVGDPIVIEQPPIELRNGRLVARGLDNRM
HCCHHCCHHHHHEEEEEEECCCCCHHHHHHHHCCCCEEEECCCCEECCCEEEEECCCCHH
GAFIALEALRALAAERPPLDVVALAATQEEISFLGARAAAFRLEPIVAIVIDVTHATDHP
HHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHEECCCEEEEEEEEECCCCCC
DADKRGGGDVRIGGGPVLDRGSMVHPLVFERLLAAAEAEGITVTLSAAPTRTGTDADAIA
CCCCCCCCEEEECCCCEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHCC
PARAGIPCGLVSVPNRYMHSPNELVSLDDLDAAIRLIARFVRDLGSSPDFRRQ
CCCCCCCCCHHHCCHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MLRDEQKSFLLRLLEAPSPSGFEEAAARIWREEASCFADDVWVDHNGNSYARLRADTPTV
CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCEEEEECCCCEE
LIEGHIDEIGLMVTHIDDQGFLWFRAIGGWDDQILTGQRVRILTRQGPILGVIGRKPAHL
EEECCCCCEEEEEEEECCCCEEEEEEECCCCCCEECCCEEEEEEECCCEEEECCCCCHHH
LSEEEKGRASRIKDLWIDIGARDGNEAREVVRVGDPIVIEQPPIELRNGRLVARGLDNRM
HCCHHCCHHHHHEEEEEEECCCCCHHHHHHHHCCCCEEEECCCCEECCCEEEEECCCCHH
GAFIALEALRALAAERPPLDVVALAATQEEISFLGARAAAFRLEPIVAIVIDVTHATDHP
HHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHEECCCEEEEEEEEECCCCCC
DADKRGGGDVRIGGGPVLDRGSMVHPLVFERLLAAAEAEGITVTLSAAPTRTGTDADAIA
CCCCCCCCEEEECCCCEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHCC
PARAGIPCGLVSVPNRYMHSPNELVSLDDLDAAIRLIARFVRDLGSSPDFRRQ
CCCCCCCCCHHHCCHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GDPglucose; H2O

Specific reaction: GDP-glucose + H2O = D-glucose + GDP

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]