| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is cutL [H]
Identifier: 221633821
GI number: 221633821
Start: 1858691
End: 1861150
Strand: Reverse
Name: cutL [H]
Synonym: trd_1848
Alternate gene names: 221633821
Gene position: 1861150-1858691 (Counterclockwise)
Preceding gene: 221633822
Following gene: 221633820
Centisome position: 92.92
GC content: 63.94
Gene sequence:
>2460_bases GTGACCGTTCGGCAATCTCGACCTTCCCTCTTGACGAACGGGTACTTCAGGACTGACAATGAGACCGAGCGATTCGCACG ACGCAGAACCGTCGGCAGAAGGGAACAGCAGTCGGGAAGGGGTTCGGTGATGGTACTCACTCGAATGGTCGGGGCACGTG TCCGTCGCAAGGAAGACCCGCGGCTCATCACCGGCTCGTCACAATACGTCGATGATCTTCAGCTCGGGGGGATGCTGTAC GCGGCGTTCGTCCGCAGTGCGTATCCGCACGCGATCATCAAGCGGATCGACCCTTCGCCCGCCTTGGCTCTGCCCGGCGT GGTCGCGGTGATCACGCACAAGGAACTGGAGCAGTGGCTGAAGGGAGCAGTCCAGTTGGGCGCGGGCGAGGGGGAAGCTG AAGCACCGGCCCAGCAAGAGGATCAGGCTGGTCCACCGCAGCACGAGCTCCTGGCGATCGACCGCGTGCGCTACGTCGGA CAGCCGATCGCCGTCGTGCTGGCAACCGAACGGTATCGCGCCTATGACGCGGCTGCTGCCGTCGAGATCGAGTACGAGCC ACTGCCCGCGGTCGTCGATCCTGAAGAAACGATGAAGGAAGGCGCGCCCCAACTCCACGCGACGGTGAAGAACAATATCG CAATGCACACCAGTCACCAGCATGGGGATATCGAGAAGGCGTTCGCCGAGGCCGACGTCATCGTCAAGCAGCGTTTTTAC CAGCAACGCCTCGTCTCGGTTCCGATGGAGCCACGCGCAGTGGTTGCTGCCCCTGATCCGCTGACACGCGGTGTCACCGT CTGGTCATCGACGCAAGCCCCACACAATAACCGGAACTCGCTCGCCCAAGCGCTCGGCTTGAGCCATGGGCAGGTGCGCG TCATCGCTCCAGAAGTCGGTGGGGGTTTCGGTGCCAAGATCGGTGCCTATCCGGAAGACATCATCCTGGCTGCGCTGGCC CTGCACCTGCACCGACCGGTCAAGTGGTACGAGACGCGCTCCGAGCATTTCATGGCGACAAATCAGGGACGAGGGCAGGT CGCCTACTACGAACTGGCCGCAACGAAGGAGGGGCGCATCCTCGGCTTGCGGGCCAAAGTGATCCAGGATCTCGGGGCCT ACCCCAAGCTCCTGCTCCTGGCAGGACTGACTGCCATGATGTCCGTCGGGGTCTACGATATTCCCAATCTCTCGATCGAG ACCTACAGCGTGCTCACCAACACCACACCGGTCGGTGCCTACCGCGGCGCTGGTCGACCCGAGGCGGCCTACTACATCGA ACGGATGATGGACCTCTTGGCCCGCAAGCTCGGCAAGGATCCCGCTGAGGTCCGGCGCCTGAACTACATCCCGCCCGAGA AGTTCCCTTGCCAAACGCCGGCGGGTGCACGCTACGATTCGGCCGAATACGAGAAGAACCTGAACAAGGCGCTGGAGATT TCCCGCTACCACGAGTGGCGACAGAAGCAACAGGAACTTTGCCAACAGGGCCGTTTCATCGGCATCGGATTGGTCACCTA TACCGAGATCTGTGGCTTCGGCCCCTACGAGAGTGCCTCGATCCGCGTCGAGCCGACCGGTGCAGTGATCGCCTACACCG GTACCTCGCCGCACGGTCAGGGGCTGGAGACAGCACTGGCCCAGATCATCGCCGACGAGATCGGTGCCGACTTCGACCAG ATCGTCGTTCTCCACGGCGATACGCAGAGTGTCCCCGAAGGCGTGGGAACGATGGGCAGCCGCAGCTTGGCGGTCGGCGG GGGGGCGATGCTTCTGGCCGCTCAGCGGATTCGCGAGAAGGCGCTCCGCATCGCGGCTCATCTCCTGGAGGCGGCTATCG AGGATGTCGAGTACGCGGATGGGAAGTACCGCGTCAAGGGTGCTCCCGACCGTGCCGTCACGCTGGCCGAGATCGCACGA GCAGCCTATAGCCCCGGTTTGCCACCGGATATCGAACCGGGCTTGGTCGCGACGGACTACTACGCGCCGTCGGGTGTGCT GTTCCCCTTCGGGACGCATGTGGCAGTGGTCGAAGTCTTCCCCGAGACAGGCGAGGTCGAGATCCTCGAGTACTACGCGG TCGATGACTGTGGCCCCCGCATCAACCCGCTCCTCGTCGAGGGCCAGGTGCACGGCGGCTTGGCCCAGGGGATCGCCCAG GCCCTCTGGGAAGAGGTCCGCTACGACGAGAACGGCCAGCTCCTCACCGGCACGCTCATGGACTACGCCATCCCCAAGGC GAGCATGCTGCCGAGTTTCGTGACCGACGAGACGGTGACACCGAGCCCGCTCAACCCGCTGGGTGCCAAGGGGATCGGCG AGGCAGCCACGATCGGCTCCACCCCGACCATCGCCAACGCGGTCATGGATGCCCTGGCCCCCTTCGGGATCGAGCACCTC GACATCCCGCTCACCCCGCAGAAGATCTGGCGGGCGATTCGAGAGGCGCAGCGAGCGTAG
Upstream 100 bases:
>100_bases AACTCGTCACCACCATCGGCATCGACGACTTCCGCATCGCAGCAGGTGATCTGGCACAAGCGATCGATCTCGTCGCGATC GCACGTGACGAGAGAGACGA
Downstream 100 bases:
>100_bases CACATCGTTCACGAGAAAGATGCCTTCGAGGGTCCCACGACACACGGGGCCCTCGATTTTTCCTTTTCCCCTTGACGACA GTGTCAAACACGTTCACGCT
Product: carbon monoxide dehydrogenase large chain
Products: NA
Alternate protein names: CO dehydrogenase subunit L; CO-DH L [H]
Number of amino acids: Translated: 819; Mature: 818
Protein sequence:
>819_residues MTVRQSRPSLLTNGYFRTDNETERFARRRTVGRREQQSGRGSVMVLTRMVGARVRRKEDPRLITGSSQYVDDLQLGGMLY AAFVRSAYPHAIIKRIDPSPALALPGVVAVITHKELEQWLKGAVQLGAGEGEAEAPAQQEDQAGPPQHELLAIDRVRYVG QPIAVVLATERYRAYDAAAAVEIEYEPLPAVVDPEETMKEGAPQLHATVKNNIAMHTSHQHGDIEKAFAEADVIVKQRFY QQRLVSVPMEPRAVVAAPDPLTRGVTVWSSTQAPHNNRNSLAQALGLSHGQVRVIAPEVGGGFGAKIGAYPEDIILAALA LHLHRPVKWYETRSEHFMATNQGRGQVAYYELAATKEGRILGLRAKVIQDLGAYPKLLLLAGLTAMMSVGVYDIPNLSIE TYSVLTNTTPVGAYRGAGRPEAAYYIERMMDLLARKLGKDPAEVRRLNYIPPEKFPCQTPAGARYDSAEYEKNLNKALEI SRYHEWRQKQQELCQQGRFIGIGLVTYTEICGFGPYESASIRVEPTGAVIAYTGTSPHGQGLETALAQIIADEIGADFDQ IVVLHGDTQSVPEGVGTMGSRSLAVGGGAMLLAAQRIREKALRIAAHLLEAAIEDVEYADGKYRVKGAPDRAVTLAEIAR AAYSPGLPPDIEPGLVATDYYAPSGVLFPFGTHVAVVEVFPETGEVEILEYYAVDDCGPRINPLLVEGQVHGGLAQGIAQ ALWEEVRYDENGQLLTGTLMDYAIPKASMLPSFVTDETVTPSPLNPLGAKGIGEAATIGSTPTIANAVMDALAPFGIEHL DIPLTPQKIWRAIREAQRA
Sequences:
>Translated_819_residues MTVRQSRPSLLTNGYFRTDNETERFARRRTVGRREQQSGRGSVMVLTRMVGARVRRKEDPRLITGSSQYVDDLQLGGMLY AAFVRSAYPHAIIKRIDPSPALALPGVVAVITHKELEQWLKGAVQLGAGEGEAEAPAQQEDQAGPPQHELLAIDRVRYVG QPIAVVLATERYRAYDAAAAVEIEYEPLPAVVDPEETMKEGAPQLHATVKNNIAMHTSHQHGDIEKAFAEADVIVKQRFY QQRLVSVPMEPRAVVAAPDPLTRGVTVWSSTQAPHNNRNSLAQALGLSHGQVRVIAPEVGGGFGAKIGAYPEDIILAALA LHLHRPVKWYETRSEHFMATNQGRGQVAYYELAATKEGRILGLRAKVIQDLGAYPKLLLLAGLTAMMSVGVYDIPNLSIE TYSVLTNTTPVGAYRGAGRPEAAYYIERMMDLLARKLGKDPAEVRRLNYIPPEKFPCQTPAGARYDSAEYEKNLNKALEI SRYHEWRQKQQELCQQGRFIGIGLVTYTEICGFGPYESASIRVEPTGAVIAYTGTSPHGQGLETALAQIIADEIGADFDQ IVVLHGDTQSVPEGVGTMGSRSLAVGGGAMLLAAQRIREKALRIAAHLLEAAIEDVEYADGKYRVKGAPDRAVTLAEIAR AAYSPGLPPDIEPGLVATDYYAPSGVLFPFGTHVAVVEVFPETGEVEILEYYAVDDCGPRINPLLVEGQVHGGLAQGIAQ ALWEEVRYDENGQLLTGTLMDYAIPKASMLPSFVTDETVTPSPLNPLGAKGIGEAATIGSTPTIANAVMDALAPFGIEHL DIPLTPQKIWRAIREAQRA >Mature_818_residues TVRQSRPSLLTNGYFRTDNETERFARRRTVGRREQQSGRGSVMVLTRMVGARVRRKEDPRLITGSSQYVDDLQLGGMLYA AFVRSAYPHAIIKRIDPSPALALPGVVAVITHKELEQWLKGAVQLGAGEGEAEAPAQQEDQAGPPQHELLAIDRVRYVGQ PIAVVLATERYRAYDAAAAVEIEYEPLPAVVDPEETMKEGAPQLHATVKNNIAMHTSHQHGDIEKAFAEADVIVKQRFYQ QRLVSVPMEPRAVVAAPDPLTRGVTVWSSTQAPHNNRNSLAQALGLSHGQVRVIAPEVGGGFGAKIGAYPEDIILAALAL HLHRPVKWYETRSEHFMATNQGRGQVAYYELAATKEGRILGLRAKVIQDLGAYPKLLLLAGLTAMMSVGVYDIPNLSIET YSVLTNTTPVGAYRGAGRPEAAYYIERMMDLLARKLGKDPAEVRRLNYIPPEKFPCQTPAGARYDSAEYEKNLNKALEIS RYHEWRQKQQELCQQGRFIGIGLVTYTEICGFGPYESASIRVEPTGAVIAYTGTSPHGQGLETALAQIIADEIGADFDQI VVLHGDTQSVPEGVGTMGSRSLAVGGGAMLLAAQRIREKALRIAAHLLEAAIEDVEYADGKYRVKGAPDRAVTLAEIARA AYSPGLPPDIEPGLVATDYYAPSGVLFPFGTHVAVVEVFPETGEVEILEYYAVDDCGPRINPLLVEGQVHGGLAQGIAQA LWEEVRYDENGQLLTGTLMDYAIPKASMLPSFVTDETVTPSPLNPLGAKGIGEAATIGSTPTIANAVMDALAPFGIEHLD IPLTPQKIWRAIREAQRA
Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]
COG id: COG1529
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI71773480, Length=773, Percent_Identity=25.8732212160414, Blast_Score=171, Evalue=3e-42, Organism=Homo sapiens, GI91823271, Length=781, Percent_Identity=25.6081946222791, Blast_Score=158, Evalue=2e-38, Organism=Escherichia coli, GI1789246, Length=821, Percent_Identity=27.2838002436054, Blast_Score=252, Evalue=7e-68, Organism=Escherichia coli, GI1789230, Length=769, Percent_Identity=28.0884265279584, Blast_Score=232, Evalue=7e-62, Organism=Escherichia coli, GI1786478, Length=780, Percent_Identity=25.8974358974359, Blast_Score=123, Evalue=5e-29, Organism=Caenorhabditis elegans, GI17540638, Length=803, Percent_Identity=24.2839352428394, Blast_Score=150, Evalue=2e-36, Organism=Caenorhabditis elegans, GI32566215, Length=576, Percent_Identity=23.7847222222222, Blast_Score=114, Evalue=3e-25, Organism=Drosophila melanogaster, GI17737937, Length=737, Percent_Identity=26.4586160108548, Blast_Score=174, Evalue=3e-43, Organism=Drosophila melanogaster, GI24647193, Length=811, Percent_Identity=25.0308261405672, Blast_Score=167, Evalue=3e-41, Organism=Drosophila melanogaster, GI24647199, Length=741, Percent_Identity=25.3711201079622, Blast_Score=149, Evalue=7e-36, Organism=Drosophila melanogaster, GI24647201, Length=783, Percent_Identity=24.3933588761175, Blast_Score=138, Evalue=2e-32, Organism=Drosophila melanogaster, GI24647195, Length=820, Percent_Identity=24.5121951219512, Blast_Score=125, Evalue=9e-29, Organism=Drosophila melanogaster, GI24647197, Length=778, Percent_Identity=24.5501285347044, Blast_Score=124, Evalue=2e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000674 - InterPro: IPR008274 - InterPro: IPR012780 [H]
Pfam domain/function: PF01315 Ald_Xan_dh_C; PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.2.99.2 [H]
Molecular weight: Translated: 89035; Mature: 88903
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: PS00107 PROTEIN_KINASE_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVRQSRPSLLTNGYFRTDNETERFARRRTVGRREQQSGRGSVMVLTRMVGARVRRKEDP CCCCCCCCCHHHCCEEECCCHHHHHHHHHHHCCHHHHCCCCCEEHHHHHHHHHHHCCCCC RLITGSSQYVDDLQLGGMLYAAFVRSAYPHAIIKRIDPSPALALPGVVAVITHKELEQWL CEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHCCCHHHHHHHHHHHHHH KGAVQLGAGEGEAEAPAQQEDQAGPPQHELLAIDRVRYVGQPIAVVLATERYRAYDAAAA HHHHEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECHHHHHHCCEEE VEIEYEPLPAVVDPEETMKEGAPQLHATVKNNIAMHTSHQHGDIEKAFAEADVIVKQRFY EEEEECCCCCCCCCHHHHHCCCCCEEHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHH QQRLVSVPMEPRAVVAAPDPLTRGVTVWSSTQAPHNNRNSLAQALGLSHGQVRVIAPEVG HHHHHCCCCCCCEEEECCCCCCCCEEEEECCCCCCCCHHHHHHHHCCCCCEEEEEECCCC GGFGAKIGAYPEDIILAALALHLHRPVKWYETRSEHFMATNQGRGQVAYYELAATKEGRI CCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCEEEECCCCCEEEEEEEEECCCCCE LGLRAKVIQDLGAYPKLLLLAGLTAMMSVGVYDIPNLSIETYSVLTNTTPVGAYRGAGRP EEHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEECCCCCEEEEEEEECCCCCCCCCCCCCC EAAYYIERMMDLLARKLGKDPAEVRRLNYIPPEKFPCQTPAGARYDSAEYEKNLNKALEI HHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH SRYHEWRQKQQELCQQGRFIGIGLVTYTEICGFGPYESASIRVEPTGAVIAYTGTSPHGQ HHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHCCCCCCCCEEEEECCCEEEEEECCCCCCC GLETALAQIIADEIGADFDQIVVLHGDTQSVPEGVGTMGSRSLAVGGGAMLLAAQRIREK CHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHCCCCCCEEEECCHHHHHHHHHHHHH ALRIAAHLLEAAIEDVEYADGKYRVKGAPDRAVTLAEIARAAYSPGLPPDIEPGLVATDY HHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECC YAPSGVLFPFGTHVAVVEVFPETGEVEILEYYAVDDCGPRINPLLVEGQVHGGLAQGIAQ CCCCCCEEECCCCEEEEEEECCCCCEEEEEEEEECCCCCCCCCEEEECCCCCHHHHHHHH ALWEEVRYDENGQLLTGTLMDYAIPKASMLPSFVTDETVTPSPLNPLGAKGIGEAATIGS HHHHHHCCCCCCCEEEEHHHHHHCCCHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCC TPTIANAVMDALAPFGIEHLDIPLTPQKIWRAIREAQRA CCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure TVRQSRPSLLTNGYFRTDNETERFARRRTVGRREQQSGRGSVMVLTRMVGARVRRKEDP CCCCCCCCHHHCCEEECCCHHHHHHHHHHHCCHHHHCCCCCEEHHHHHHHHHHHCCCCC RLITGSSQYVDDLQLGGMLYAAFVRSAYPHAIIKRIDPSPALALPGVVAVITHKELEQWL CEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHCCCHHHHHHHHHHHHHH KGAVQLGAGEGEAEAPAQQEDQAGPPQHELLAIDRVRYVGQPIAVVLATERYRAYDAAAA HHHHEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECHHHHHHCCEEE VEIEYEPLPAVVDPEETMKEGAPQLHATVKNNIAMHTSHQHGDIEKAFAEADVIVKQRFY EEEEECCCCCCCCCHHHHHCCCCCEEHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHH QQRLVSVPMEPRAVVAAPDPLTRGVTVWSSTQAPHNNRNSLAQALGLSHGQVRVIAPEVG HHHHHCCCCCCCEEEECCCCCCCCEEEEECCCCCCCCHHHHHHHHCCCCCEEEEEECCCC GGFGAKIGAYPEDIILAALALHLHRPVKWYETRSEHFMATNQGRGQVAYYELAATKEGRI CCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCEEEECCCCCEEEEEEEEECCCCCE LGLRAKVIQDLGAYPKLLLLAGLTAMMSVGVYDIPNLSIETYSVLTNTTPVGAYRGAGRP EEHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEECCCCCEEEEEEEECCCCCCCCCCCCCC EAAYYIERMMDLLARKLGKDPAEVRRLNYIPPEKFPCQTPAGARYDSAEYEKNLNKALEI HHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH SRYHEWRQKQQELCQQGRFIGIGLVTYTEICGFGPYESASIRVEPTGAVIAYTGTSPHGQ HHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHCCCCCCCCEEEEECCCEEEEEECCCCCCC GLETALAQIIADEIGADFDQIVVLHGDTQSVPEGVGTMGSRSLAVGGGAMLLAAQRIREK CHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHCCCCCCEEEECCHHHHHHHHHHHHH ALRIAAHLLEAAIEDVEYADGKYRVKGAPDRAVTLAEIARAAYSPGLPPDIEPGLVATDY HHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECC YAPSGVLFPFGTHVAVVEVFPETGEVEILEYYAVDDCGPRINPLLVEGQVHGGLAQGIAQ CCCCCCEEECCCCEEEEEEECCCCCEEEEEEEEECCCCCCCCCEEEECCCCCHHHHHHHH ALWEEVRYDENGQLLTGTLMDYAIPKASMLPSFVTDETVTPSPLNPLGAKGIGEAATIGS HHHHHHCCCCCCCEEEEHHHHHHCCCHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCC TPTIANAVMDALAPFGIEHLDIPLTPQKIWRAIREAQRA CCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10482497; 2818128; 10966817; 11076018 [H]