| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is 221633774
Identifier: 221633774
GI number: 221633774
Start: 1806581
End: 1806739
Strand: Reverse
Name: 221633774
Synonym: trd_1800
Alternate gene names: NA
Gene position: 1806739-1806581 (Counterclockwise)
Preceding gene: 221633775
Following gene: 221633770
Centisome position: 90.2
GC content: 63.52
Gene sequence:
>159_bases TTGCCTGATCGCCTGGACAAAACAGCGATCGGTTGCGCTCTACCGCCACATCGACGCGGGAGCGAGAAGATCACCACGGA GAGCGTACCCGCACGCGTTGCGGTCGGGCACCCACTCGCCACAGGCACAGCGAAGGCATCATGGCTCGTCAGCTGGTGA
Upstream 100 bases:
>100_bases GCTGTCGCGAGCCTCCGCCGATCCTATGGCGTCAAGGCACGAGGGTAAGCCGTTCGCGTGTCAACTCGCCGGGCACGCTC CGGGCTGGTAGGCAGAAAGC
Downstream 100 bases:
>100_bases GGACAGCGAGGCGGCAGCAGTCCGCGCGACGCGAATCCGGCTCAACCGGTGCAGCAGCGGGAAGAGAGTCAGCAGGAGCA CACCCGCAGCCACACCAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 52; Mature: 51
Protein sequence:
>52_residues MPDRLDKTAIGCALPPHRRGSEKITTESVPARVAVGHPLATGTAKASWLVSW
Sequences:
>Translated_52_residues MPDRLDKTAIGCALPPHRRGSEKITTESVPARVAVGHPLATGTAKASWLVSW >Mature_51_residues PDRLDKTAIGCALPPHRRGSEKITTESVPARVAVGHPLATGTAKASWLVSW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5537; Mature: 5406
Theoretical pI: Translated: 10.49; Mature: 10.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDRLDKTAIGCALPPHRRGSEKITTESVPARVAVGHPLATGTAKASWLVSW CCCCCCCCEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEC >Mature Secondary Structure PDRLDKTAIGCALPPHRRGSEKITTESVPARVAVGHPLATGTAKASWLVSW CCCCCCCEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA