The gene/protein map for NC_011959 is currently unavailable.
Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is 221633724

Identifier: 221633724

GI number: 221633724

Start: 1758300

End: 1758971

Strand: Reverse

Name: 221633724

Synonym: trd_1751

Alternate gene names: NA

Gene position: 1758971-1758300 (Counterclockwise)

Preceding gene: 221633725

Following gene: 221633723

Centisome position: 87.82

GC content: 66.37

Gene sequence:

>672_bases
ATGACCGATCGCAGCAGTCACTTGGACGAAGAGCGACTCGCGCTCCTGGCGAGCGAGGAGCCGGATGCGGAGGTATCGGC
GCATCTCGCCCAATGCGAGTTCTGTCGCCGCCGCTGGCAGGAGTATCGCGCGGTTCGCCAGGCGTTGCGCTCCTTGCCCG
CGCCGCCGCTCCCGCGCGACTTCGCGGCAGCGCTGAATCATGCCCCGCCCCTTCGACGGGCAACCTGGTGGTGGCGCTAT
CGCACAGTGCTTCGCGCCGGGACGCTCCTCGCTGCGACGCTCTTGGTCGTCCTTCTCTCTGCGGTCGTCGCCGCTCCTCG
TTTCCTGCCCAGCGAGGACCGGCAGACCACGCTCGGCCCCTCACCAGTGGCGGAACTCGCACCGGCGGCTCAACCAAACA
CCGAAGAAATGCGCTCAGCTGGGATCGCGTCGCAAACGCCTGCCATTCTCGCGAGCGAGACGCCGAGCAGTACGTTCGCC
GCCGCCACCGAAGCTACCGCCAAGGTACCGGCGACCTCGGAGCAGGAACCCGTTTCGGAAATGCCTCGTACCATTCGTCT
TCTCGCCTGGGTGGGTATCGTTGTCCTCGCTTTTCTCACGCTCGCTGGATTCTGGTTCGGGTTTCTCTTACCTGCCCGGC
GGGTCCGCCGGTTTCCGGTCGTGCGTCGCTGA

Upstream 100 bases:

>100_bases
CGATCCGCGAGCGAGGGAACTCTTGGGGCTGAGCGGTCGTCTCCCGGATAGGGAGGGTGAGTCGCCGGAACGCCTGATCG
AAGGTGAGTGACGGTTCTCG

Downstream 100 bases:

>100_bases
GCGGGAACCGAAACTGCCTCTCGCTCGTCATCTCTGCGGAGACATGGAGCGGAAAGGAGAAAGCGATGCAGAGAACCTGG
GTTCCTCTCGCTGTCGTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 222

Protein sequence:

>223_residues
MTDRSSHLDEERLALLASEEPDAEVSAHLAQCEFCRRRWQEYRAVRQALRSLPAPPLPRDFAAALNHAPPLRRATWWWRY
RTVLRAGTLLAATLLVVLLSAVVAAPRFLPSEDRQTTLGPSPVAELAPAAQPNTEEMRSAGIASQTPAILASETPSSTFA
AATEATAKVPATSEQEPVSEMPRTIRLLAWVGIVVLAFLTLAGFWFGFLLPARRVRRFPVVRR

Sequences:

>Translated_223_residues
MTDRSSHLDEERLALLASEEPDAEVSAHLAQCEFCRRRWQEYRAVRQALRSLPAPPLPRDFAAALNHAPPLRRATWWWRY
RTVLRAGTLLAATLLVVLLSAVVAAPRFLPSEDRQTTLGPSPVAELAPAAQPNTEEMRSAGIASQTPAILASETPSSTFA
AATEATAKVPATSEQEPVSEMPRTIRLLAWVGIVVLAFLTLAGFWFGFLLPARRVRRFPVVRR
>Mature_222_residues
TDRSSHLDEERLALLASEEPDAEVSAHLAQCEFCRRRWQEYRAVRQALRSLPAPPLPRDFAAALNHAPPLRRATWWWRYR
TVLRAGTLLAATLLVVLLSAVVAAPRFLPSEDRQTTLGPSPVAELAPAAQPNTEEMRSAGIASQTPAILASETPSSTFAA
ATEATAKVPATSEQEPVSEMPRTIRLLAWVGIVVLAFLTLAGFWFGFLLPARRVRRFPVVRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24643; Mature: 24511

Theoretical pI: Translated: 10.51; Mature: 10.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDRSSHLDEERLALLASEEPDAEVSAHLAQCEFCRRRWQEYRAVRQALRSLPAPPLPRD
CCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
FAAALNHAPPLRRATWWWRYRTVLRAGTLLAATLLVVLLSAVVAAPRFLPSEDRQTTLGP
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
SPVAELAPAAQPNTEEMRSAGIASQTPAILASETPSSTFAAATEATAKVPATSEQEPVSE
CCHHHHCCCCCCCHHHHHHCCCCCCCCCCEECCCCCHHHHHHHHHHHCCCCCCCCCHHHH
MPRTIRLLAWVGIVVLAFLTLAGFWFGFLLPARRVRRFPVVRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TDRSSHLDEERLALLASEEPDAEVSAHLAQCEFCRRRWQEYRAVRQALRSLPAPPLPRD
CCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
FAAALNHAPPLRRATWWWRYRTVLRAGTLLAATLLVVLLSAVVAAPRFLPSEDRQTTLGP
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
SPVAELAPAAQPNTEEMRSAGIASQTPAILASETPSSTFAAATEATAKVPATSEQEPVSE
CCHHHHCCCCCCCHHHHHHCCCCCCCCCCEECCCCCHHHHHHHHHHHCCCCCCCCCHHHH
MPRTIRLLAWVGIVVLAFLTLAGFWFGFLLPARRVRRFPVVRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA