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The map label for this gene is bp26 [H]

Identifier: 221633723

GI number: 221633723

Start: 1757503

End: 1758234

Strand: Reverse

Name: bp26 [H]

Synonym: trd_1750

Alternate gene names: 221633723

Gene position: 1758234-1757503 (Counterclockwise)

Preceding gene: 221633724

Following gene: 221633722

Centisome position: 87.78

GC content: 65.44

Gene sequence:

>732_bases
ATGCAGAGAACCTGGGTTCCTCTCGCTGTCGTGCTCGGCCTTCTGGTGATGGTGGGAGCGGTGCTGAGCGGTACGGCGAG
CATGCGCCTGCCGCAGGCTGCGGCGCAGGACACCGGGACAGTCCAGCGTTCGATCAGCGTTTCTGGTGAAGGGCGCGTTT
CGCTGCCACCTGATACTGCCACGCTCACCCTGGGAGCTGAGGTCTTCGATCCCGATGCGGCGGCGGCTCAGCGTGAAGTC
CAACGACGTATGGAGGCGATCCTGTCGGTCTTTCGCCAGGCTGGCATACCGGAGAGCAAGGTCAAGACCGTGGTGTACAG
CATGTCGGTCGAGCGGGACTGGAACCAACCGACGACGCCGGTGATCGGTTACCGCGTGACGCATCTCGTCGAGGTGCAAC
TGCAACCGGTCGAGCGGACCGGTGACCTCCTCGACCGCGCCGTCCAAGCTGGTGCCAATGCGGTGACCAATATCAGCTTT
TCGGTTTCCAACCCTGCCGCGGCGCTGCGGCAAGCACGCGAGCTCGCGGTTCGCGATGCCCGCGAGAAGGCAGCCCAACT
CGCCCAGCTGAGTGGTGTCGCCCTCGGCGCGCCGCTGCGCATCGTCGAGTCGACGAGTTCGCCACCGGTTCCGGTGCCGG
CGGTCGGCGCGGGTGGTCCGGAAGCCAAGGCCGTTCCGGCCGGGGAAGCAACGATCGTCGTGACTGTCTCGATCGATTAC
GCGATCCAGTAA

Upstream 100 bases:

>100_bases
GGCGGGTCCGCCGGTTTCCGGTCGTGCGTCGCTGAGCGGGAACCGAAACTGCCTCTCGCTCGTCATCTCTGCGGAGACAT
GGAGCGGAAAGGAGAAAGCG

Downstream 100 bases:

>100_bases
AGCCTCGGTATGATCGAGACTGGCAAGGAGGAGGCATCTCCCCTTGCCGGTCTCGTGCATGGGCGCGAGACCGGCTCGCG
GAGCGATGGCGGCGCGGAGC

Product: putative periplasmic immunogenic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MQRTWVPLAVVLGLLVMVGAVLSGTASMRLPQAAAQDTGTVQRSISVSGEGRVSLPPDTATLTLGAEVFDPDAAAAQREV
QRRMEAILSVFRQAGIPESKVKTVVYSMSVERDWNQPTTPVIGYRVTHLVEVQLQPVERTGDLLDRAVQAGANAVTNISF
SVSNPAAALRQARELAVRDAREKAAQLAQLSGVALGAPLRIVESTSSPPVPVPAVGAGGPEAKAVPAGEATIVVTVSIDY
AIQ

Sequences:

>Translated_243_residues
MQRTWVPLAVVLGLLVMVGAVLSGTASMRLPQAAAQDTGTVQRSISVSGEGRVSLPPDTATLTLGAEVFDPDAAAAQREV
QRRMEAILSVFRQAGIPESKVKTVVYSMSVERDWNQPTTPVIGYRVTHLVEVQLQPVERTGDLLDRAVQAGANAVTNISF
SVSNPAAALRQARELAVRDAREKAAQLAQLSGVALGAPLRIVESTSSPPVPVPAVGAGGPEAKAVPAGEATIVVTVSIDY
AIQ
>Mature_243_residues
MQRTWVPLAVVLGLLVMVGAVLSGTASMRLPQAAAQDTGTVQRSISVSGEGRVSLPPDTATLTLGAEVFDPDAAAAQREV
QRRMEAILSVFRQAGIPESKVKTVVYSMSVERDWNQPTTPVIGYRVTHLVEVQLQPVERTGDLLDRAVQAGANAVTNISF
SVSNPAAALRQARELAVRDAREKAAQLAQLSGVALGAPLRIVESTSSPPVPVPAVGAGGPEAKAVPAGEATIVVTVSIDY
AIQ

Specific function: Unknown

COG id: COG2968

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789289, Length=196, Percent_Identity=28.5714285714286, Blast_Score=61, Evalue=6e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007497 [H]

Pfam domain/function: PF04402 DUF541 [H]

EC number: NA

Molecular weight: Translated: 25392; Mature: 25392

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRTWVPLAVVLGLLVMVGAVLSGTASMRLPQAAAQDTGTVQRSISVSGEGRVSLPPDTA
CCCCCHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHCCCCHHEEEEEECCCCEEECCCCCE
TLTLGAEVFDPDAAAAQREVQRRMEAILSVFRQAGIPESKVKTVVYSMSVERDWNQPTTP
EEEECCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEEEEECCCCCCCCCC
VIGYRVTHLVEVQLQPVERTGDLLDRAVQAGANAVTNISFSVSNPAAALRQARELAVRDA
CHHHEEEEEEEEEEECCHHHHHHHHHHHHHCCCEEEEEEEEECCHHHHHHHHHHHHHHHH
REKAAQLAQLSGVALGAPLRIVESTSSPPVPVPAVGAGGPEAKAVPAGEATIVVTVSIDY
HHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEE
AIQ
EEC
>Mature Secondary Structure
MQRTWVPLAVVLGLLVMVGAVLSGTASMRLPQAAAQDTGTVQRSISVSGEGRVSLPPDTA
CCCCCHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHCCCCHHEEEEEECCCCEEECCCCCE
TLTLGAEVFDPDAAAAQREVQRRMEAILSVFRQAGIPESKVKTVVYSMSVERDWNQPTTP
EEEECCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEEEEECCCCCCCCCC
VIGYRVTHLVEVQLQPVERTGDLLDRAVQAGANAVTNISFSVSNPAAALRQARELAVRDA
CHHHEEEEEEEEEEECCHHHHHHHHHHHHHCCCEEEEEEEEECCHHHHHHHHHHHHHHHH
REKAAQLAQLSGVALGAPLRIVESTSSPPVPVPAVGAGGPEAKAVPAGEATIVVTVSIDY
HHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEE
AIQ
EEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8748294 [H]