Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is 221633562

Identifier: 221633562

GI number: 221633562

Start: 1572335

End: 1573624

Strand: Reverse

Name: 221633562

Synonym: trd_1586

Alternate gene names: NA

Gene position: 1573624-1572335 (Counterclockwise)

Preceding gene: 221633564

Following gene: 221633561

Centisome position: 78.56

GC content: 75.66

Gene sequence:

>1290_bases
GTGAGCATCCCGCGGCTCGAGCCGAGCGCAGCCGACCGCGCCCGCTGGGCGCGCTACCGCGACTACCTGGCCTTTTGGGA
GGGGCGGCAGTGGACGGACCGCCCGCGCCCCGGCGAGACGCGCCTGACGCTCAACTACGCGCGCGCCCTGGTGCGCAAGG
TGACCAGCGTGCTGTTCTCCCGCCCGGTGCGCTACAGCGTGCCCGAGTCGGCGGCGGCCGAGCGGTACCTGGCGCGCCTG
GCACGCGAGGACGACTGGGCCGGGCTGGACGACGCGGCGGCGCTCGATGCCGCCGTGCTGGGGGATGCGGCCTTCAAGGT
GACCTGGGATGCCGCCCGGCGCCGGCCGCGCGTCACGCCGATCGATCCCGCGCAGCTGGTCGCGGCCACCCGGCCGGACG
ATGCGCGCGAGGTGGTGGCGGTGGCCCACGAGTACCCGCTCGAGCCCGCCGCGCTGGAGGCGGTCTTCGGGCTGCGCCTG
CCCCGGCTGGGGCCGGAGGGGTGGGTGACGGTGCGCGAGGAGTGGACGGCCGAACGCTACCGGCTGCTCGTCGCCGGGGA
GACGGTGCACGACGATGCCAACCCCTACGGCTGGATTCCCTACGTCCTCGTCCCCAACAGCCCGGCGCCCGGTGGCCCCT
GGGGGGAGAGCGACCTGGCTGACCTGCTCGACGTCTGCCGGGAGCTGAACCGGCGGCTGACGGTGCTCTCGCGCATCCTG
CAGGTCTCCGGCAACCCGATCGTCGTGCTGGAGAACGTGACGGCCAGCGAGGGGATCCGGGCGGAGGAGGGGGCAGTCTG
GGAGCTGCCGGAGGGGAGCCGGGCGTACCTCTTGGACATGCTCTCCGGTGGGGGCGTGGCGCTGCACCTGGAGTACGTGC
GGCTGCTCTTCCAGGTGCTGCACGACCTGGCCGAGGTGCCGCGGGCCGCCTTCGGCGACCACGGGCGCGACCTCTCCGGT
GCGGCGCTGGAGCTGGAGCTGCAGCCGCTGGTGCACAAGGTGGAGCGCAAGCGGCGGAGCTGGGAGCGGGCGCTCCGGCA
GCGCGCCCAGCGGGTGCTCGATTTGGCCGAGCGGCTGGGGGGCGAGTCGTTCGGCGGCGCGCGCGGGGTGGAGGTCGTCT
GGGGGCCGCTCCTGCCGGTGGACGAGGAGCGGGCGGTGCGGGTGCAGGTCGGGTTGGTGGCGGCGGGCATCCGCTCGCGC
CTGACGGCGGCACGCGAGCTGGGGTCGCTCGACCCCGAGGCGGAGCTGGCGCGGGTGGCGGCCGAGCGCGCCGCCGGGCT
GGGCGGGTGA

Upstream 100 bases:

>100_bases
CGAGTCCGGTGTCCGCTTTCGGTTCGCTCGCGCTGTGTCCCTTCATGGAGGGGTCGCGCGGCCGGGGGCCGGTCGCGCGC
CAGAGGAAGGGAGGGCGGCG

Downstream 100 bases:

>100_bases
GCCGGGCGATGGGCGGAGTGCGCGCGACACCGCCGACACGGCGGACGCGCCCGACCGCGGTGCGGGAACCCACGACCGGG
GATGCACCGCGCCACGTTGT

Product: phage domain-containing protein

Products: NA

Alternate protein names: Phage Portal; Phage Domain-Containing Protein

Number of amino acids: Translated: 429; Mature: 428

Protein sequence:

>429_residues
MSIPRLEPSAADRARWARYRDYLAFWEGRQWTDRPRPGETRLTLNYARALVRKVTSVLFSRPVRYSVPESAAAERYLARL
AREDDWAGLDDAAALDAAVLGDAAFKVTWDAARRRPRVTPIDPAQLVAATRPDDAREVVAVAHEYPLEPAALEAVFGLRL
PRLGPEGWVTVREEWTAERYRLLVAGETVHDDANPYGWIPYVLVPNSPAPGGPWGESDLADLLDVCRELNRRLTVLSRIL
QVSGNPIVVLENVTASEGIRAEEGAVWELPEGSRAYLLDMLSGGGVALHLEYVRLLFQVLHDLAEVPRAAFGDHGRDLSG
AALELELQPLVHKVERKRRSWERALRQRAQRVLDLAERLGGESFGGARGVEVVWGPLLPVDEERAVRVQVGLVAAGIRSR
LTAARELGSLDPEAELARVAAERAAGLGG

Sequences:

>Translated_429_residues
MSIPRLEPSAADRARWARYRDYLAFWEGRQWTDRPRPGETRLTLNYARALVRKVTSVLFSRPVRYSVPESAAAERYLARL
AREDDWAGLDDAAALDAAVLGDAAFKVTWDAARRRPRVTPIDPAQLVAATRPDDAREVVAVAHEYPLEPAALEAVFGLRL
PRLGPEGWVTVREEWTAERYRLLVAGETVHDDANPYGWIPYVLVPNSPAPGGPWGESDLADLLDVCRELNRRLTVLSRIL
QVSGNPIVVLENVTASEGIRAEEGAVWELPEGSRAYLLDMLSGGGVALHLEYVRLLFQVLHDLAEVPRAAFGDHGRDLSG
AALELELQPLVHKVERKRRSWERALRQRAQRVLDLAERLGGESFGGARGVEVVWGPLLPVDEERAVRVQVGLVAAGIRSR
LTAARELGSLDPEAELARVAAERAAGLGG
>Mature_428_residues
SIPRLEPSAADRARWARYRDYLAFWEGRQWTDRPRPGETRLTLNYARALVRKVTSVLFSRPVRYSVPESAAAERYLARLA
REDDWAGLDDAAALDAAVLGDAAFKVTWDAARRRPRVTPIDPAQLVAATRPDDAREVVAVAHEYPLEPAALEAVFGLRLP
RLGPEGWVTVREEWTAERYRLLVAGETVHDDANPYGWIPYVLVPNSPAPGGPWGESDLADLLDVCRELNRRLTVLSRILQ
VSGNPIVVLENVTASEGIRAEEGAVWELPEGSRAYLLDMLSGGGVALHLEYVRLLFQVLHDLAEVPRAAFGDHGRDLSGA
ALELELQPLVHKVERKRRSWERALRQRAQRVLDLAERLGGESFGGARGVEVVWGPLLPVDEERAVRVQVGLVAAGIRSRL
TAARELGSLDPEAELARVAAERAAGLGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47353; Mature: 47222

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.2 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIPRLEPSAADRARWARYRDYLAFWEGRQWTDRPRPGETRLTLNYARALVRKVTSVLFS
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHC
RPVRYSVPESAAAERYLARLAREDDWAGLDDAAALDAAVLGDAAFKVTWDAARRRPRVTP
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEEHHHHCCCCCCC
IDPAQLVAATRPDDAREVVAVAHEYPLEPAALEAVFGLRLPRLGPEGWVTVREEWTAERY
CCHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCEEEHHHHCCCCE
RLLVAGETVHDDANPYGWIPYVLVPNSPAPGGPWGESDLADLLDVCRELNRRLTVLSRIL
EEEEECCEECCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QVSGNPIVVLENVTASEGIRAEEGAVWELPEGSRAYLLDMLSGGGVALHLEYVRLLFQVL
HCCCCCEEEEECCCCCCCCCCCCCCEEECCCCCHHHHEEHHCCCCEEEEHHHHHHHHHHH
HDLAEVPRAAFGDHGRDLSGAALELELQPLVHKVERKRRSWERALRQRAQRVLDLAERLG
HHHHHCCHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GESFGGARGVEVVWGPLLPVDEERAVRVQVGLVAAGIRSRLTAARELGSLDPEAELARVA
CCCCCCCCCCEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
AERAAGLGG
HHHHCCCCC
>Mature Secondary Structure 
SIPRLEPSAADRARWARYRDYLAFWEGRQWTDRPRPGETRLTLNYARALVRKVTSVLFS
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHC
RPVRYSVPESAAAERYLARLAREDDWAGLDDAAALDAAVLGDAAFKVTWDAARRRPRVTP
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEEHHHHCCCCCCC
IDPAQLVAATRPDDAREVVAVAHEYPLEPAALEAVFGLRLPRLGPEGWVTVREEWTAERY
CCHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCEEEHHHHCCCCE
RLLVAGETVHDDANPYGWIPYVLVPNSPAPGGPWGESDLADLLDVCRELNRRLTVLSRIL
EEEEECCEECCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QVSGNPIVVLENVTASEGIRAEEGAVWELPEGSRAYLLDMLSGGGVALHLEYVRLLFQVL
HCCCCCEEEEECCCCCCCCCCCCCCEEECCCCCHHHHEEHHCCCCEEEEHHHHHHHHHHH
HDLAEVPRAAFGDHGRDLSGAALELELQPLVHKVERKRRSWERALRQRAQRVLDLAERLG
HHHHHCCHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GESFGGARGVEVVWGPLLPVDEERAVRVQVGLVAAGIRSRLTAARELGSLDPEAELARVA
CCCCCCCCCCEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
AERAAGLGG
HHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA