| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is 221633561
Identifier: 221633561
GI number: 221633561
Start: 1570872
End: 1571168
Strand: Reverse
Name: 221633561
Synonym: trd_1585
Alternate gene names: NA
Gene position: 1571168-1570872 (Counterclockwise)
Preceding gene: 221633562
Following gene: 221633560
Centisome position: 78.44
GC content: 76.09
Gene sequence:
>297_bases ATGGACGAACCGCTCTTCACCGAAACGCTCGCGGTGGCCGGGGTGCCGGCGGTGGTGCTGGTGCCGCTCCTGGTGGAGGC GGCCAAGCGCGCTGGACTCCCCACCCGCTACGCGCCGCTGGCGACCCTGGTCGCGGCCGGCCTCGTCGCGGCGCTGGCCG AGGCGGCGCCGGTGGTGCCGCAGCTCGCGCCCTTCGCCCGCTGGGCGGTGGCCACGCTGCTCTTGGCACTGGGAGCGAGC GGCGCCTACGAGACCGCCCGCTTCCTGCGGCGCGAGCTGGGCGCTGAACGGGGATGA
Upstream 100 bases:
>100_bases CGCCCAGCCGCGCCATCCAGTCCCCCACATGGGGCTCGCGGATTCAGTCCGGGGCGTTGCCCCGGGGCGCATCGTTCTCG TTCCCAGAAAGGAGGTATCG
Downstream 100 bases:
>100_bases CGGGCCGGGCGCTCCTGCGCCGGGTGCTGGCCGACCCGCTCGCCTGCTCGCGCCTGCTCCTGCCGGAGCGCGCGCTGCGC GGCTACCAAGCGGGGCCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 98; Mature: 98
Protein sequence:
>98_residues MDEPLFTETLAVAGVPAVVLVPLLVEAAKRAGLPTRYAPLATLVAAGLVAALAEAAPVVPQLAPFARWAVATLLLALGAS GAYETARFLRRELGAERG
Sequences:
>Translated_98_residues MDEPLFTETLAVAGVPAVVLVPLLVEAAKRAGLPTRYAPLATLVAAGLVAALAEAAPVVPQLAPFARWAVATLLLALGAS GAYETARFLRRELGAERG >Mature_98_residues MDEPLFTETLAVAGVPAVVLVPLLVEAAKRAGLPTRYAPLATLVAAGLVAALAEAAPVVPQLAPFARWAVATLLLALGAS GAYETARFLRRELGAERG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10062; Mature: 10062
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEPLFTETLAVAGVPAVVLVPLLVEAAKRAGLPTRYAPLATLVAAGLVAALAEAAPVVP CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHH QLAPFARWAVATLLLALGASGAYETARFLRRELGAERG HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure MDEPLFTETLAVAGVPAVVLVPLLVEAAKRAGLPTRYAPLATLVAAGLVAALAEAAPVVP CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHH QLAPFARWAVATLLLALGASGAYETARFLRRELGAERG HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA