The gene/protein map for NC_011959 is currently unavailable.
Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

Click here to switch to the map view.

The map label for this gene is 221633551

Identifier: 221633551

GI number: 221633551

Start: 1559023

End: 1559232

Strand: Reverse

Name: 221633551

Synonym: trd_1575

Alternate gene names: NA

Gene position: 1559232-1559023 (Counterclockwise)

Preceding gene: 221633557

Following gene: 221633550

Centisome position: 77.84

GC content: 72.38

Gene sequence:

>210_bases
ATGGGTTCTCTCGCGCCGCGACCGTTCGCCCACGGTGCGGTTCTCGGCTCGGTCGGCCTGGCCGGTGCGATCGGCGCGTG
CCACCGCTGCTGGTGGCAGGTAGGCGGCTCTTCTCGCGCGCTGCCGCAGGAGGCAGTGCCGGCTAATGCATCCCTGGTCG
CAGCGGGCGCCGTTTTGCCGCGTGCCGGTGCCTTCGGCGGACTCCGCTGA

Upstream 100 bases:

>100_bases
AGGCGGTGCCTGACCCGCCGGTCTGGGAGGGCCGGCACGCGCGACCGTCTCGCCGCTTCCTCATCGCAGGCGTTGGATCG
CCACGGTCTATTCTGCCACG

Downstream 100 bases:

>100_bases
CGGAAAGCGCTCGTTCCGGTACAGTCGAGCGGTGGACGTCCTGGCGCGCGTCCGAGCGCGATCGGAAAGGGGCTGGTCAT
GCGGATCGGCGTGGTTTTCC

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 69; Mature: 68

Protein sequence:

>69_residues
MGSLAPRPFAHGAVLGSVGLAGAIGACHRCWWQVGGSSRALPQEAVPANASLVAAGAVLPRAGAFGGLR

Sequences:

>Translated_69_residues
MGSLAPRPFAHGAVLGSVGLAGAIGACHRCWWQVGGSSRALPQEAVPANASLVAAGAVLPRAGAFGGLR
>Mature_68_residues
GSLAPRPFAHGAVLGSVGLAGAIGACHRCWWQVGGSSRALPQEAVPANASLVAAGAVLPRAGAFGGLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6749; Mature: 6618

Theoretical pI: Translated: 11.90; Mature: 11.90

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSLAPRPFAHGAVLGSVGLAGAIGACHRCWWQVGGSSRALPQEAVPANASLVAAGAVLP
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCC
RAGAFGGLR
CCCCCCCCC
>Mature Secondary Structure 
GSLAPRPFAHGAVLGSVGLAGAIGACHRCWWQVGGSSRALPQEAVPANASLVAAGAVLP
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCC
RAGAFGGLR
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA