| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is 221633551
Identifier: 221633551
GI number: 221633551
Start: 1559023
End: 1559232
Strand: Reverse
Name: 221633551
Synonym: trd_1575
Alternate gene names: NA
Gene position: 1559232-1559023 (Counterclockwise)
Preceding gene: 221633557
Following gene: 221633550
Centisome position: 77.84
GC content: 72.38
Gene sequence:
>210_bases ATGGGTTCTCTCGCGCCGCGACCGTTCGCCCACGGTGCGGTTCTCGGCTCGGTCGGCCTGGCCGGTGCGATCGGCGCGTG CCACCGCTGCTGGTGGCAGGTAGGCGGCTCTTCTCGCGCGCTGCCGCAGGAGGCAGTGCCGGCTAATGCATCCCTGGTCG CAGCGGGCGCCGTTTTGCCGCGTGCCGGTGCCTTCGGCGGACTCCGCTGA
Upstream 100 bases:
>100_bases AGGCGGTGCCTGACCCGCCGGTCTGGGAGGGCCGGCACGCGCGACCGTCTCGCCGCTTCCTCATCGCAGGCGTTGGATCG CCACGGTCTATTCTGCCACG
Downstream 100 bases:
>100_bases CGGAAAGCGCTCGTTCCGGTACAGTCGAGCGGTGGACGTCCTGGCGCGCGTCCGAGCGCGATCGGAAAGGGGCTGGTCAT GCGGATCGGCGTGGTTTTCC
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 69; Mature: 68
Protein sequence:
>69_residues MGSLAPRPFAHGAVLGSVGLAGAIGACHRCWWQVGGSSRALPQEAVPANASLVAAGAVLPRAGAFGGLR
Sequences:
>Translated_69_residues MGSLAPRPFAHGAVLGSVGLAGAIGACHRCWWQVGGSSRALPQEAVPANASLVAAGAVLPRAGAFGGLR >Mature_68_residues GSLAPRPFAHGAVLGSVGLAGAIGACHRCWWQVGGSSRALPQEAVPANASLVAAGAVLPRAGAFGGLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6749; Mature: 6618
Theoretical pI: Translated: 11.90; Mature: 11.90
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSLAPRPFAHGAVLGSVGLAGAIGACHRCWWQVGGSSRALPQEAVPANASLVAAGAVLP CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCC RAGAFGGLR CCCCCCCCC >Mature Secondary Structure GSLAPRPFAHGAVLGSVGLAGAIGACHRCWWQVGGSSRALPQEAVPANASLVAAGAVLP CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCC RAGAFGGLR CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA