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The map label for this gene is ycdM [C]

Identifier: 221633550

GI number: 221633550

Start: 1558066

End: 1558944

Strand: Reverse

Name: ycdM [C]

Synonym: trd_1574

Alternate gene names: 221633550

Gene position: 1558944-1558066 (Counterclockwise)

Preceding gene: 221633551

Following gene: 221633549

Centisome position: 77.83

GC content: 67.8

Gene sequence:

>879_bases
ATGCGGATCGGCGTGGTTTTCCCGCAGACCGAAATCGGCAGCGATCCGGCCGTGATCCGCGCGTATGCCGAAACTGTCGA
GGAGCTCGGGTACACGCATCTGTTGACCTACGAGCATGTCGTCGGCGTGGATCTCGCTCACTACCCCGGGTGGCGCGGTC
CGTACCATGCGAGGCATCAGTTCCACGAGCCGTTCGTCCTGTTCGGGTATCTCGCGGCAGTGACGCGTCACCTCGAGTTG
GTCACTGGCGTCGTCATCTTGCCGCAACGGCAGACCGTGCTGGTCGCCAAGCAGGCGGCGGAGGTGGATGTGCTCTCGGG
CGGGCGCCTGCGGCTCGGTGTGGGAGTCGGCTGGAACGAGGCGGAGTACATCGCGCTCGGCATGGACTTTCACACGCGTG
GCCGGCGGGAGGAAGAGCAGATCACCGTGCTGCGGTTGCTCTGGACACAGCCGATCGTCAGCTTCGAGGGACGCTGGCAC
CGGCTGCCGGCGGTCGGCCTGAACCCGTTGCCTGTCCAGCGGCCGATCCCGATCTGGCTGGGCGGGATGTCCGAGGCGGC
GCGCCGGCGGGCGGCGCGCCTGGCCGATGGCTGGATGCCGCAATGGCGTCCGACTGCCGAACTCCACGCCATGGTCGAGG
AGCTGCGGGAATGGCTCGTGGCAGCTGGCCGCGATCCCGCTCGCTTCGGGCTCGAAGGACGCCTGACACTCGCGCAGGTG
CCACGGGCAGCGTGGCTGGCCGAGATCGAGGCCTGGCGTCGTCTCGGGGCGACGCACCTCTGCATCAACACGATGGGGCT
CGGATTATCCTCCCCGCAGGCGCACCTGGACATCTTGCGCGAGCTCGCTCAGACACTGGGGCTGACGCCCATTCGGTAG

Upstream 100 bases:

>100_bases
TGCCTTCGGCGGACTCCGCTGACGGAAAGCGCTCGTTCCGGTACAGTCGAGCGGTGGACGTCCTGGCGCGCGTCCGAGCG
CGATCGGAAAGGGGCTGGTC

Downstream 100 bases:

>100_bases
CCGGTTGGGTGAGCCAGTGTCCTGGCATGGCGTGCAGCGGTTGGTCATCGGCCAGCGACCGCGCGACTGGGACTGACCTC
GGTGACGAGTGCCCTGTCGA

Product: putative monooxygenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MRIGVVFPQTEIGSDPAVIRAYAETVEELGYTHLLTYEHVVGVDLAHYPGWRGPYHARHQFHEPFVLFGYLAAVTRHLEL
VTGVVILPQRQTVLVAKQAAEVDVLSGGRLRLGVGVGWNEAEYIALGMDFHTRGRREEEQITVLRLLWTQPIVSFEGRWH
RLPAVGLNPLPVQRPIPIWLGGMSEAARRRAARLADGWMPQWRPTAELHAMVEELREWLVAAGRDPARFGLEGRLTLAQV
PRAAWLAEIEAWRRLGATHLCINTMGLGLSSPQAHLDILRELAQTLGLTPIR

Sequences:

>Translated_292_residues
MRIGVVFPQTEIGSDPAVIRAYAETVEELGYTHLLTYEHVVGVDLAHYPGWRGPYHARHQFHEPFVLFGYLAAVTRHLEL
VTGVVILPQRQTVLVAKQAAEVDVLSGGRLRLGVGVGWNEAEYIALGMDFHTRGRREEEQITVLRLLWTQPIVSFEGRWH
RLPAVGLNPLPVQRPIPIWLGGMSEAARRRAARLADGWMPQWRPTAELHAMVEELREWLVAAGRDPARFGLEGRLTLAQV
PRAAWLAEIEAWRRLGATHLCINTMGLGLSSPQAHLDILRELAQTLGLTPIR
>Mature_292_residues
MRIGVVFPQTEIGSDPAVIRAYAETVEELGYTHLLTYEHVVGVDLAHYPGWRGPYHARHQFHEPFVLFGYLAAVTRHLEL
VTGVVILPQRQTVLVAKQAAEVDVLSGGRLRLGVGVGWNEAEYIALGMDFHTRGRREEEQITVLRLLWTQPIVSFEGRWH
RLPAVGLNPLPVQRPIPIWLGGMSEAARRRAARLADGWMPQWRPTAELHAMVEELREWLVAAGRDPARFGLEGRLTLAQV
PRAAWLAEIEAWRRLGATHLCINTMGLGLSSPQAHLDILRELAQTLGLTPIR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019921
- InterPro:   IPR011251
- InterPro:   IPR016048 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: NA

Molecular weight: Translated: 32783; Mature: 32783

Theoretical pI: Translated: 7.93; Mature: 7.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIGVVFPQTEIGSDPAVIRAYAETVEELGYTHLLTYEHVVGVDLAHYPGWRGPYHARHQ
CEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEEHHHHHCCCHHCCCCCCCCCHHHHH
FHEPFVLFGYLAAVTRHLELVTGVVILPQRQTVLVAKQAAEVDVLSGGRLRLGVGVGWNE
CCCHHHHHHHHHHHHHHHHHHHCEEEECCCCEEEEEHHCCCEEEECCCEEEEEECCCCCC
AEYIALGMDFHTRGRREEEQITVLRLLWTQPIVSFEGRWHRLPAVGLNPLPVQRPIPIWL
CEEEEEECCCCCCCCCCHHHHHHHHHHHHCCHHHCCCCEEECCCCCCCCCCCCCCCCEEE
GGMSEAARRRAARLADGWMPQWRPTAELHAMVEELREWLVAAGRDPARFGLEGRLTLAQV
CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHC
PRAAWLAEIEAWRRLGATHLCINTMGLGLSSPQAHLDILRELAQTLGLTPIR
CHHHHHHHHHHHHHCCCHHEEHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MRIGVVFPQTEIGSDPAVIRAYAETVEELGYTHLLTYEHVVGVDLAHYPGWRGPYHARHQ
CEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEEHHHHHCCCHHCCCCCCCCCHHHHH
FHEPFVLFGYLAAVTRHLELVTGVVILPQRQTVLVAKQAAEVDVLSGGRLRLGVGVGWNE
CCCHHHHHHHHHHHHHHHHHHHCEEEECCCCEEEEEHHCCCEEEECCCEEEEEECCCCCC
AEYIALGMDFHTRGRREEEQITVLRLLWTQPIVSFEGRWHRLPAVGLNPLPVQRPIPIWL
CEEEEEECCCCCCCCCCHHHHHHHHHHHHCCHHHCCCCEEECCCCCCCCCCCCCCCCEEE
GGMSEAARRRAARLADGWMPQWRPTAELHAMVEELREWLVAAGRDPARFGLEGRLTLAQV
CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHC
PRAAWLAEIEAWRRLGATHLCINTMGLGLSSPQAHLDILRELAQTLGLTPIR
CHHHHHHHHHHHHHCCCHHEEHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]