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The map label for this gene is yhiD [H]

Identifier: 221633474

GI number: 221633474

Start: 1479225

End: 1479710

Strand: Reverse

Name: yhiD [H]

Synonym: trd_1496

Alternate gene names: 221633474

Gene position: 1479710-1479225 (Counterclockwise)

Preceding gene: 221633475

Following gene: 221633468

Centisome position: 73.87

GC content: 66.46

Gene sequence:

>486_bases
ATGTTGAGCGAAGCCGAGGCGATCGTGCGGCTCATCATCGCGCTCCTGCTCGGGGGGCTGCTGGGCTTCGAGCGCGAACT
CAGTGCCAAGCCGGCCGGGCTGCGCACGCACATGCTGGTCGCTGAAGGCGCGGCGCTCTTCATGGTCTGCTCGATGCTGC
TCATGGAGCAGTTTTCCCGTCCGGAGGTCGGTATCCTGATCGATCCCAGCCGGATCGGCTCGACGATCGTCACCGGCGTC
GGGTTTCTGGGTGGTGGCATGATCCTGCGGGCCCGGGACCGCGTCTTCGGGCTGACGACGGCGGCTGGGATCTGGGTTGC
AGCCGCGATCGGGATGCTGGTCGGGGCGGGATACTACGTGATCGCGATCGTCGGGACACTCCTGGCTGTTGCGACGATCG
TCTTCGTGCGCCGGATCGAGCGGTACCTGCGCCTTCCGGACCAGCTGCGCGAGCGACCACTGGACGAGCTTTCCGTCGAG
GAGTGA

Upstream 100 bases:

>100_bases
GGTTGGTTCACCCTCGGCAGAAGCGGTAGACTCGACGCGCGTCGGCCTTAATGGTATCCCGCGGCGGTACTATCGAACAG
CGCTGGACAGGGATGGTCCG

Downstream 100 bases:

>100_bases
TACCATGGCGATTCGTCTCAAGCGTGTCTACGAGCCACCGGATCCGGACGGCGGGGAGCGTTATTCGTTGGAGCGGCTCT
GGCCACGTGGAATCCGACAG

Product: mgtC family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MLSEAEAIVRLIIALLLGGLLGFERELSAKPAGLRTHMLVAEGAALFMVCSMLLMEQFSRPEVGILIDPSRIGSTIVTGV
GFLGGGMILRARDRVFGLTTAAGIWVAAAIGMLVGAGYYVIAIVGTLLAVATIVFVRRIERYLRLPDQLRERPLDELSVE
E

Sequences:

>Translated_161_residues
MLSEAEAIVRLIIALLLGGLLGFERELSAKPAGLRTHMLVAEGAALFMVCSMLLMEQFSRPEVGILIDPSRIGSTIVTGV
GFLGGGMILRARDRVFGLTTAAGIWVAAAIGMLVGAGYYVIAIVGTLLAVATIVFVRRIERYLRLPDQLRERPLDELSVE
E
>Mature_161_residues
MLSEAEAIVRLIIALLLGGLLGFERELSAKPAGLRTHMLVAEGAALFMVCSMLLMEQFSRPEVGILIDPSRIGSTIVTGV
GFLGGGMILRARDRVFGLTTAAGIWVAAAIGMLVGAGYYVIAIVGTLLAVATIVFVRRIERYLRLPDQLRERPLDELSVE
E

Specific function: Unknown

COG id: COG1285

COG function: function code S; Uncharacterized membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MgtC/SapB family [H]

Homologues:

Organism=Escherichia coli, GI1789924, Length=127, Percent_Identity=48.8188976377953, Blast_Score=115, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003416 [H]

Pfam domain/function: PF02308 MgtC [H]

EC number: NA

Molecular weight: Translated: 17326; Mature: 17326

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSEAEAIVRLIIALLLGGLLGFERELSAKPAGLRTHMLVAEGAALFMVCSMLLMEQFSR
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PEVGILIDPSRIGSTIVTGVGFLGGGMILRARDRVFGLTTAAGIWVAAAIGMLVGAGYYV
CCCEEEECHHHHHHHHHHHHHHHCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAIVGTLLAVATIVFVRRIERYLRLPDQLRERPLDELSVEE
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCC
>Mature Secondary Structure
MLSEAEAIVRLIIALLLGGLLGFERELSAKPAGLRTHMLVAEGAALFMVCSMLLMEQFSR
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PEVGILIDPSRIGSTIVTGVGFLGGGMILRARDRVFGLTTAAGIWVAAAIGMLVGAGYYV
CCCEEEECHHHHHHHHHHHHHHHCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAIVGTLLAVATIVFVRRIERYLRLPDQLRERPLDELSVEE
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]