| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is 221633475
Identifier: 221633475
GI number: 221633475
Start: 1479971
End: 1480345
Strand: Reverse
Name: 221633475
Synonym: trd_1497
Alternate gene names: NA
Gene position: 1480345-1479971 (Counterclockwise)
Preceding gene: 221633476
Following gene: 221633474
Centisome position: 73.91
GC content: 64.0
Gene sequence:
>375_bases ATGCGGCGCGGCTGGTTGTGGGTGATCGTCGGTGGCTTGCTCGCGATCTTCGTCGTGCTGTTCGTCGTCTTGTATCTGTT GGGCGGGCCGGAGCAGTCGGCACTGGAGCGGGTCCGCGATATTGCGATCATCTTCCTCGCCCTTTCGACTGTTCTCGTCG TGCTCCTGCTCGGTGCCCTGGTCGGGATCGGGATCTGGCTGGGGCTCCTGATCCGGGATCATTTGATTCCCCTGCTCGCG GCAGCGACCGAGACGATGTCGCGCGCGAAGGGAACGGTCGAATTCGTGGGGGAGACGATCGCCCGGCCCATCATTCGGAC CTATGGACGGGTGGCAGGTCTTCGTGCGCTGATCCGCACCCTCACGCAGCGGTGA
Upstream 100 bases:
>100_bases CCTCTGGCTCGTGACGACGCCAGCTGAAGCGGCCCGCTCTCGTCGAGCGAGGCAGCGCGTCCGACGGAACGGCGATCGAT CGTCGGGGGAGGGATAGGGG
Downstream 100 bases:
>100_bases GGGTACGCCGCACTGGAGACAGCGAGCGGGCAGCGAGCAGCGCTGCCCGCGTTGTGCGTTGATGTGCCTGCTTTCTGGTG TCAGCACCCGGCTGATGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MRRGWLWVIVGGLLAIFVVLFVVLYLLGGPEQSALERVRDIAIIFLALSTVLVVLLLGALVGIGIWLGLLIRDHLIPLLA AATETMSRAKGTVEFVGETIARPIIRTYGRVAGLRALIRTLTQR
Sequences:
>Translated_124_residues MRRGWLWVIVGGLLAIFVVLFVVLYLLGGPEQSALERVRDIAIIFLALSTVLVVLLLGALVGIGIWLGLLIRDHLIPLLA AATETMSRAKGTVEFVGETIARPIIRTYGRVAGLRALIRTLTQR >Mature_124_residues MRRGWLWVIVGGLLAIFVVLFVVLYLLGGPEQSALERVRDIAIIFLALSTVLVVLLLGALVGIGIWLGLLIRDHLIPLLA AATETMSRAKGTVEFVGETIARPIIRTYGRVAGLRALIRTLTQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13557; Mature: 13557
Theoretical pI: Translated: 11.83; Mature: 11.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRGWLWVIVGGLLAIFVVLFVVLYLLGGPEQSALERVRDIAIIFLALSTVLVVLLLGAL CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGIGIWLGLLIRDHLIPLLAAATETMSRAKGTVEFVGETIARPIIRTYGRVAGLRALIRT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTQR HHCC >Mature Secondary Structure MRRGWLWVIVGGLLAIFVVLFVVLYLLGGPEQSALERVRDIAIIFLALSTVLVVLLLGAL CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGIGIWLGLLIRDHLIPLLAAATETMSRAKGTVEFVGETIARPIIRTYGRVAGLRALIRT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTQR HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA