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The map label for this gene is yvmA [H]

Identifier: 221633466

GI number: 221633466

Start: 1471073

End: 1472356

Strand: Reverse

Name: yvmA [H]

Synonym: trd_1487

Alternate gene names: 221633466

Gene position: 1472356-1471073 (Counterclockwise)

Preceding gene: 221633468

Following gene: 221633459

Centisome position: 73.51

GC content: 65.42

Gene sequence:

>1284_bases
ATGCGACTGGCCCGGGTGCTCGAGCCAGGACCAGGCGCGCTGCGTTCATGGTACCGGATCAACCGCGTACTGGTCTGGAT
TTCCGCGATCGTCGGCATCAACCAGCTCGGTTTCGGGAGCATCGTGCCGGTCGTTCCGCTCTATGCGCAAGCCTACGGTG
TCTCCGAAGCGCTGATCGGCCTGGCGATCGCGGTCTATGGTCTCGCCCGCTTCACGTCATCGGCTCCGGCTGGCTGGATC
GCCGATCGAGCGGGGCGTCGGTGGTCGTTATTCGCCGGTGGCCTGGCGACGGTTTTGGGCAATATTCTCTGTGCGCTCGC
CCCCTCCTATCCGATTTTTCTCGTCGGTCGATTCGTCGCGGGAAGCGGCGCATCGATGGTGCTCACCAGTGGGCAAATCG
TGCTGGCCGATATCACCGAACCAGCGACACGCGGTCGGACGATGGCGATCTACCAGGCTGTCTTCCTGTTCGCTGTCGGC
TTCGGGCCGATCCCTGGTGGCTTTTTGGCACAGTATGGAGGCCTGAGTGCTCCCTTCTGGGTCTACGGTTTCGTCGGCGC
GATCGTCGCGGTGCTGGCGCTCTGGCGCCTGCCCGAGACGCGACCAGCTGGTGCTCGTGAACCTGCCCAGGGCAACGAGT
TCGTCTTCAGGCGCCAGTTGGTGAGCGTGCTGCGGCATCGACCGCTAGTGCTCATCGGACTCGTCACCTTCGGGAATTTC
TTCGCCCGAACGGGCGCACTCTTCACGCTCGTCCCGCTGCGAGCGGAGCGCGAGATCGGGCTCAGCCCCTCGCAGATCGG
CTTCGGTCTGGCGGCAGTGAGCGTCGTGTCGCTGGTCATGGCGTATCCGGCTGGCGTCCTGCTCGATACGTTCGGGCGCA
AGGTCGTCATCGCGCCGGCAACGTTGTTCAGCGGGCTCGGCCTCGTCGGATTCGCCTTCGCCTCGTCGTATCCATGGTTT
CTCCTAGCATGCGTCACGTGGGCTCTGGCCAGCGGGATCGGGGGAGGGGCACCAGCCGCCTACGCGGCGGATGTCTCCCC
GCCAGGCATGACAGCGGCGGCGATGAGCGCCTATCGGATGCTCTCCGAACTCGGGTACGTGGTAGGACCGACCGTGCTGG
GGCTCGCGGCGGAAACGATCGGCATTCGCGCGACACTCGTGGCGACAGCTGTCCTGATCGTCGGACTGGGCGGGCTGTTC
TGGCTGGCGGCTCCAGAAACGTGGCCAGGGCGGCGGATGGTGAGCGATCGAGATGCCGACGGCGCGTCAGCGAACAGTCG
GTGA

Upstream 100 bases:

>100_bases
GGCTGTGGGGTGTTCCAGCGCGTGACGCGGATCGTCTCCTGCATGGTGACCTCCCCTGCTGTCGGTTGTCTTGCTCGATC
AGGTGCGGAAGGAACTGCTG

Downstream 100 bases:

>100_bases
GGCGAGAAGGTCGAGTGGGAATCGCTCGCCACGATCGAAGACGAACTCGCGCTCGGTAGTCAGCAGCGTCACCGCGCCGC
TACCGAGAACCCGACCGGAG

Product: transporter, major facilitator family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 427; Mature: 427

Protein sequence:

>427_residues
MRLARVLEPGPGALRSWYRINRVLVWISAIVGINQLGFGSIVPVVPLYAQAYGVSEALIGLAIAVYGLARFTSSAPAGWI
ADRAGRRWSLFAGGLATVLGNILCALAPSYPIFLVGRFVAGSGASMVLTSGQIVLADITEPATRGRTMAIYQAVFLFAVG
FGPIPGGFLAQYGGLSAPFWVYGFVGAIVAVLALWRLPETRPAGAREPAQGNEFVFRRQLVSVLRHRPLVLIGLVTFGNF
FARTGALFTLVPLRAEREIGLSPSQIGFGLAAVSVVSLVMAYPAGVLLDTFGRKVVIAPATLFSGLGLVGFAFASSYPWF
LLACVTWALASGIGGGAPAAYAADVSPPGMTAAAMSAYRMLSELGYVVGPTVLGLAAETIGIRATLVATAVLIVGLGGLF
WLAAPETWPGRRMVSDRDADGASANSR

Sequences:

>Translated_427_residues
MRLARVLEPGPGALRSWYRINRVLVWISAIVGINQLGFGSIVPVVPLYAQAYGVSEALIGLAIAVYGLARFTSSAPAGWI
ADRAGRRWSLFAGGLATVLGNILCALAPSYPIFLVGRFVAGSGASMVLTSGQIVLADITEPATRGRTMAIYQAVFLFAVG
FGPIPGGFLAQYGGLSAPFWVYGFVGAIVAVLALWRLPETRPAGAREPAQGNEFVFRRQLVSVLRHRPLVLIGLVTFGNF
FARTGALFTLVPLRAEREIGLSPSQIGFGLAAVSVVSLVMAYPAGVLLDTFGRKVVIAPATLFSGLGLVGFAFASSYPWF
LLACVTWALASGIGGGAPAAYAADVSPPGMTAAAMSAYRMLSELGYVVGPTVLGLAAETIGIRATLVATAVLIVGLGGLF
WLAAPETWPGRRMVSDRDADGASANSR
>Mature_427_residues
MRLARVLEPGPGALRSWYRINRVLVWISAIVGINQLGFGSIVPVVPLYAQAYGVSEALIGLAIAVYGLARFTSSAPAGWI
ADRAGRRWSLFAGGLATVLGNILCALAPSYPIFLVGRFVAGSGASMVLTSGQIVLADITEPATRGRTMAIYQAVFLFAVG
FGPIPGGFLAQYGGLSAPFWVYGFVGAIVAVLALWRLPETRPAGAREPAQGNEFVFRRQLVSVLRHRPLVLIGLVTFGNF
FARTGALFTLVPLRAEREIGLSPSQIGFGLAAVSVVSLVMAYPAGVLLDTFGRKVVIAPATLFSGLGLVGFAFASSYPWF
LLACVTWALASGIGGGAPAAYAADVSPPGMTAAAMSAYRMLSELGYVVGPTVLGLAAETIGIRATLVATAVLIVGLGGLF
WLAAPETWPGRRMVSDRDADGASANSR

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]

Homologues:

Organism=Escherichia coli, GI87081738, Length=173, Percent_Identity=31.7919075144509, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1790146, Length=223, Percent_Identity=25.5605381165919, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR001411 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 44598; Mature: 44598

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLARVLEPGPGALRSWYRINRVLVWISAIVGINQLGFGSIVPVVPLYAQAYGVSEALIG
CCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
LAIAVYGLARFTSSAPAGWIADRAGRRWSLFAGGLATVLGNILCALAPSYPIFLVGRFVA
HHHHHHHHHHHHCCCCCCHHHHHCCCEEEEHHCHHHHHHHHHHHHHCCCCCCEEEEHHHC
GSGASMVLTSGQIVLADITEPATRGRTMAIYQAVFLFAVGFGPIPGGFLAQYGGLSAPFW
CCCCEEEEECCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHH
VYGFVGAIVAVLALWRLPETRPAGAREPAQGNEFVFRRQLVSVLRHRPLVLIGLVTFGNF
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEHHHHHHHH
FARTGALFTLVPLRAEREIGLSPSQIGFGLAAVSVVSLVMAYPAGVLLDTFGRKVVIAPA
HHHHCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEEEHH
TLFSGLGLVGFAFASSYPWFLLACVTWALASGIGGGAPAAYAADVSPPGMTAAAMSAYRM
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCHHHHHHHHHHH
LSELGYVVGPTVLGLAAETIGIRATLVATAVLIVGLGGLFWLAAPETWPGRRMVSDRDAD
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCC
GASANSR
CCCCCCC
>Mature Secondary Structure
MRLARVLEPGPGALRSWYRINRVLVWISAIVGINQLGFGSIVPVVPLYAQAYGVSEALIG
CCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
LAIAVYGLARFTSSAPAGWIADRAGRRWSLFAGGLATVLGNILCALAPSYPIFLVGRFVA
HHHHHHHHHHHHCCCCCCHHHHHCCCEEEEHHCHHHHHHHHHHHHHCCCCCCEEEEHHHC
GSGASMVLTSGQIVLADITEPATRGRTMAIYQAVFLFAVGFGPIPGGFLAQYGGLSAPFW
CCCCEEEEECCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHH
VYGFVGAIVAVLALWRLPETRPAGAREPAQGNEFVFRRQLVSVLRHRPLVLIGLVTFGNF
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEHHHHHHHH
FARTGALFTLVPLRAEREIGLSPSQIGFGLAAVSVVSLVMAYPAGVLLDTFGRKVVIAPA
HHHHCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEEEHH
TLFSGLGLVGFAFASSYPWFLLACVTWALASGIGGGAPAAYAADVSPPGMTAAAMSAYRM
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCHHHHHHHHHHH
LSELGYVVGPTVLGLAAETIGIRATLVATAVLIVGLGGLFWLAAPETWPGRRMVSDRDAD
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCC
GASANSR
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]