| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is 221633369
Identifier: 221633369
GI number: 221633369
Start: 1379781
End: 1379996
Strand: Reverse
Name: 221633369
Synonym: trd_1389
Alternate gene names: NA
Gene position: 1379996-1379781 (Counterclockwise)
Preceding gene: 221633370
Following gene: 221633368
Centisome position: 68.9
GC content: 61.57
Gene sequence:
>216_bases ATGCTGGTCCTGAAGGTGACGATGGTCGAAGGGCGCACGCCGGAACAGAAGGCCGAGTTGATTCGTCGACTTGCCGAAGC AGCTGGGCGTCACCTGGGTTTTCCGGTGGAGGAAATTCGGACCGTCATCTACGAAGTCGGGCGCGATGAGTGGGGCATCG GGACAATGACGATGGCGGAGCGAGACCGTGCTGCCTCGTCGCAGCCAGGAGACTGA
Upstream 100 bases:
>100_bases TTCGGGCAGTGCAGCCACTGGGTACAGATCGAGAAACGCGAGAGCTTCAACGAGTTGGTCCGTGCGTTTCTGCGCGGCAA GCTCTAAGAAGGAGAACACG
Downstream 100 bases:
>100_bases GGGGGAGTGTCGAGCGATGCTGAGCGAGCCGGAGAAAAAACTCCTGGAAGCGATCCGCGAGGCACGAGAGCGACGCCAGC CTCTCTCGCCGCTCGCGGAA
Product: putative tautomerase
Products: NA
Alternate protein names: Tautomerase
Number of amino acids: Translated: 71; Mature: 71
Protein sequence:
>71_residues MLVLKVTMVEGRTPEQKAELIRRLAEAAGRHLGFPVEEIRTVIYEVGRDEWGIGTMTMAERDRAASSQPGD
Sequences:
>Translated_71_residues MLVLKVTMVEGRTPEQKAELIRRLAEAAGRHLGFPVEEIRTVIYEVGRDEWGIGTMTMAERDRAASSQPGD >Mature_71_residues MLVLKVTMVEGRTPEQKAELIRRLAEAAGRHLGFPVEEIRTVIYEVGRDEWGIGTMTMAERDRAASSQPGD
Specific function: Unknown
COG id: COG1942
COG function: function code R; Uncharacterized protein, 4-oxalocrotonate tautomerase homolog
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7927; Mature: 7927
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVLKVTMVEGRTPEQKAELIRRLAEAAGRHLGFPVEEIRTVIYEVGRDEWGIGTMTMAE CEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHH RDRAASSQPGD HHHCCCCCCCC >Mature Secondary Structure MLVLKVTMVEGRTPEQKAELIRRLAEAAGRHLGFPVEEIRTVIYEVGRDEWGIGTMTMAE CEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHH RDRAASSQPGD HHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA