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The map label for this gene is hspC2 [H]

Identifier: 221633244

GI number: 221633244

Start: 1247505

End: 1247936

Strand: Reverse

Name: hspC2 [H]

Synonym: trd_1262

Alternate gene names: 221633244

Gene position: 1247936-1247505 (Counterclockwise)

Preceding gene: 221633245

Following gene: 221633241

Centisome position: 62.3

GC content: 63.19

Gene sequence:

>432_bases
GTGGCGGGCAGACGATCTTTCGACCCCTGGGCGGAGGGTTTTCCGTGGCGCGAACTCTTGGAACAGGCCTATGGGCTACG
GGGTGAGCGATCCGGGCCGATGGTGGCCGGTGTGGGTGTACCGGTGGACATTGCCGAGCTCGAGGACGCATACGTCATCT
ATGCGGTGATACCAGGGGTGGAGCCAGCCGCGATGGACCTCGTCGTCGAGGACGATCGCGTCGTTCTCCGCGGTGAGGTG
CGGGAACCCTCGGTGGATGGGCAATGGGTCAGTCGCGAGCGTCGCTTCGGTCGGTTTCAACGCACGATCGAGTTGCCGAG
TCCAGTCGATCCGGAACGAGCCGAAGCCCGGTACGAGAATGGCATACTCGTCATTCGTCTCCCCAAGGCAGCTCCCGGAA
GAGTGCGCCGTATTCCAGTCAAGGCGAGTTGA

Upstream 100 bases:

>100_bases
ACGTGCAAGCGTCGCGTCGCCCGGCCGGGCGCTGGCTCACGGTCGTGCGGGCGCTCGGGTTCCTGGGGCGGTGACGGATC
CTGAGCAGGAGGAACGGAGC

Downstream 100 bases:

>100_bases
GTCGGGCGAGCACTGGCCAACGCTCGGGCACAGTCTGGGTTCGCTCAACTGCCTTCCTCGCGCCACACCCCGATGGCGCG
AAAGCGCGCCCATCGGAAGC

Product: putative HspC2 heat shock protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MAGRRSFDPWAEGFPWRELLEQAYGLRGERSGPMVAGVGVPVDIAELEDAYVIYAVIPGVEPAAMDLVVEDDRVVLRGEV
REPSVDGQWVSRERRFGRFQRTIELPSPVDPERAEARYENGILVIRLPKAAPGRVRRIPVKAS

Sequences:

>Translated_143_residues
MAGRRSFDPWAEGFPWRELLEQAYGLRGERSGPMVAGVGVPVDIAELEDAYVIYAVIPGVEPAAMDLVVEDDRVVLRGEV
REPSVDGQWVSRERRFGRFQRTIELPSPVDPERAEARYENGILVIRLPKAAPGRVRRIPVKAS
>Mature_142_residues
AGRRSFDPWAEGFPWRELLEQAYGLRGERSGPMVAGVGVPVDIAELEDAYVIYAVIPGVEPAAMDLVVEDDRVVLRGEVR
EPSVDGQWVSRERRFGRFQRTIELPSPVDPERAEARYENGILVIRLPKAAPGRVRRIPVKAS

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 16009; Mature: 15878

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGRRSFDPWAEGFPWRELLEQAYGLRGERSGPMVAGVGVPVDIAELEDAYVIYAVIPGV
CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCEEHHHCCCCEEEEEEECCC
EPAAMDLVVEDDRVVLRGEVREPSVDGQWVSRERRFGRFQRTIELPSPVDPERAEARYEN
CCCCEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHCC
GILVIRLPKAAPGRVRRIPVKAS
CEEEEECCCCCCCCEEEECCCCC
>Mature Secondary Structure 
AGRRSFDPWAEGFPWRELLEQAYGLRGERSGPMVAGVGVPVDIAELEDAYVIYAVIPGV
CCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCEEHHHCCCCEEEEEEECCC
EPAAMDLVVEDDRVVLRGEVREPSVDGQWVSRERRFGRFQRTIELPSPVDPERAEARYEN
CCCCEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHCC
GILVIRLPKAAPGRVRRIPVKAS
CEEEEECCCCCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA