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The map label for this gene is glgC

Identifier: 221633241

GI number: 221633241

Start: 1244377

End: 1245663

Strand: Reverse

Name: glgC

Synonym: trd_1259

Alternate gene names: 221633241

Gene position: 1245663-1244377 (Counterclockwise)

Preceding gene: 221633244

Following gene: 221633240

Centisome position: 62.19

GC content: 61.93

Gene sequence:

>1287_bases
ATGAGCGACGTCGCGGTGATGATCCTCGCGGGAGGGCAGGGAGAGCGGTTGAGCATTCTCTCGCGCCAGCGCGCGAAGCC
AGCGGTGCCGTTCGGTGGGAAATACCGTATCATCGACTTCGCCCTCTCCAACTGTGTGAACTCGGGCTTGTACGATGTGG
CTGTCTTGACGCAATACCGGCCACACTCGCTGAACGAGCATATCGGTCACGGCCGTCCCTGGGACCTCGATCGCGAGCGC
AATGGTGGGGTGGTGATCCTCCAGCCGTATCTTGGGCGCTCCACGTCCGGCTGGTATCGGGGCACAGCCGACGCTGTGTA
TCACAACCTCTTTTACATTACGCGGCGTCCCTACCGCGATGTGCTGATCTTAGCGGGTGATCATGTCTACGCGATGGACT
ACCGACCGATGATCGCCCAGCATCGCGAGCGCTGCGCCGATGTAACGATCGCGGTGCAACCAGTGGATTGGCGCGAAGCC
TCGCGCTTCGGCGTGGTGATCGTCGCTGAGGATGGTTGGGTGGTCGATTTCGAGGAGAAGCCGGAACGACCGCGCTCCAA
TCTCGCGTCCATGGGAATTTACCTGTTTCGGCGCAATCTCCTGCTGGACCTTTTCACGCGCGACCACCCGGATGCGCCGG
AGTTCATCGATTTCGGCCGCGACGTGATCCCCTATCTCATTCGGACAGCTCGGGTGGCAACGTATCGCTTCGATGGCTAC
TGGCAGGATGTCGGAACCGTGCAGTCGTACTGGGAAGCAAACATGGCACTCCTGGAGGACGAGCCGAAGCTCAATCTCTA
CGACCCCAACTGGCGGATTCATACCCGCAGCGAGGAGCGGCCACCGGCCAAGATTCTCGAAGGAGCGACGGTGATCCGGA
GCTTGCTTTCCAATGGGTGCATCGTGGAAGGCGCGACCGTCATCCGGTCGATCCTCTCGCCCGGCGTGATCGTGAAGGCA
GGAGCGGTGGTGCGCGATTCGATCGTGATGACCGATTCGGTGATCGGGCCAGGAGCGGTCGTCGATCGCTGCATCATCGA
CAAGCACGTGACGATCGGCGCCAATGCGTACCTCGGCTGGGGGGACGACAACTCCCCGAACTGGTTGGAGCCCAGTCGGC
TGAATACCGGAATCACCCTAGTGGGGCGCAATGCGGTCGTGCCGCCCGGGGTACGGATCGGACGCAACGTGTTGATCGGG
CCCGAGGTCAAGGAAAGCGACTTCCCCGGTGCGGTCGTGCCCAGCGGGGAAACGGTGAACCCGATCGCGACCGTGGTATG
GTCGTGA

Upstream 100 bases:

>100_bases
GCGTCTCCGCAAGAATGGTCGCACCGGTACCCCTCTCGGTGTGCCTGCCTGTCGGGCTATGATACACGCGGGAACGGTCA
AGCTGGGGCGGGAGGGCGCG

Downstream 100 bases:

>100_bases
GTGGGAACGAGGCGGGCGCATGATGCTGTGCAACGACCGAGCCAAACGAGCGAGTCTTCCAGTCGTTCTCTATCTGAGCG
CTGAGGTCGCGCCATTCTCC

Product: glucose-1-phosphate adenylyltransferase

Products: NA

Alternate protein names: ADP-glucose pyrophosphorylase; ADPGlc PPase; ADP-glucose synthase

Number of amino acids: Translated: 428; Mature: 427

Protein sequence:

>428_residues
MSDVAVMILAGGQGERLSILSRQRAKPAVPFGGKYRIIDFALSNCVNSGLYDVAVLTQYRPHSLNEHIGHGRPWDLDRER
NGGVVILQPYLGRSTSGWYRGTADAVYHNLFYITRRPYRDVLILAGDHVYAMDYRPMIAQHRERCADVTIAVQPVDWREA
SRFGVVIVAEDGWVVDFEEKPERPRSNLASMGIYLFRRNLLLDLFTRDHPDAPEFIDFGRDVIPYLIRTARVATYRFDGY
WQDVGTVQSYWEANMALLEDEPKLNLYDPNWRIHTRSEERPPAKILEGATVIRSLLSNGCIVEGATVIRSILSPGVIVKA
GAVVRDSIVMTDSVIGPGAVVDRCIIDKHVTIGANAYLGWGDDNSPNWLEPSRLNTGITLVGRNAVVPPGVRIGRNVLIG
PEVKESDFPGAVVPSGETVNPIATVVWS

Sequences:

>Translated_428_residues
MSDVAVMILAGGQGERLSILSRQRAKPAVPFGGKYRIIDFALSNCVNSGLYDVAVLTQYRPHSLNEHIGHGRPWDLDRER
NGGVVILQPYLGRSTSGWYRGTADAVYHNLFYITRRPYRDVLILAGDHVYAMDYRPMIAQHRERCADVTIAVQPVDWREA
SRFGVVIVAEDGWVVDFEEKPERPRSNLASMGIYLFRRNLLLDLFTRDHPDAPEFIDFGRDVIPYLIRTARVATYRFDGY
WQDVGTVQSYWEANMALLEDEPKLNLYDPNWRIHTRSEERPPAKILEGATVIRSLLSNGCIVEGATVIRSILSPGVIVKA
GAVVRDSIVMTDSVIGPGAVVDRCIIDKHVTIGANAYLGWGDDNSPNWLEPSRLNTGITLVGRNAVVPPGVRIGRNVLIG
PEVKESDFPGAVVPSGETVNPIATVVWS
>Mature_427_residues
SDVAVMILAGGQGERLSILSRQRAKPAVPFGGKYRIIDFALSNCVNSGLYDVAVLTQYRPHSLNEHIGHGRPWDLDRERN
GGVVILQPYLGRSTSGWYRGTADAVYHNLFYITRRPYRDVLILAGDHVYAMDYRPMIAQHRERCADVTIAVQPVDWREAS
RFGVVIVAEDGWVVDFEEKPERPRSNLASMGIYLFRRNLLLDLFTRDHPDAPEFIDFGRDVIPYLIRTARVATYRFDGYW
QDVGTVQSYWEANMALLEDEPKLNLYDPNWRIHTRSEERPPAKILEGATVIRSLLSNGCIVEGATVIRSILSPGVIVKAG
AVVRDSIVMTDSVIGPGAVVDRCIIDKHVTIGANAYLGWGDDNSPNWLEPSRLNTGITLVGRNAVVPPGVRIGRNVLIGP
EVKESDFPGAVVPSGETVNPIATVVWS

Specific function: Glycogen biosynthesis; first step. [C]

COG id: COG0448

COG function: function code G; ADP-glucose pyrophosphorylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family

Homologues:

Organism=Homo sapiens, GI11761619, Length=356, Percent_Identity=22.4719101123595, Blast_Score=70, Evalue=4e-12,
Organism=Homo sapiens, GI11761621, Length=353, Percent_Identity=22.3796033994334, Blast_Score=70, Evalue=5e-12,
Organism=Escherichia coli, GI1789837, Length=413, Percent_Identity=38.9830508474576, Blast_Score=276, Evalue=2e-75,
Organism=Caenorhabditis elegans, GI133931050, Length=350, Percent_Identity=24.8571428571429, Blast_Score=79, Evalue=3e-15,
Organism=Saccharomyces cerevisiae, GI6320148, Length=352, Percent_Identity=21.875, Blast_Score=77, Evalue=4e-15,
Organism=Drosophila melanogaster, GI21355443, Length=352, Percent_Identity=22.7272727272727, Blast_Score=83, Evalue=4e-16,
Organism=Drosophila melanogaster, GI24644084, Length=352, Percent_Identity=22.7272727272727, Blast_Score=83, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GLGC_THERP (B9L1J9)

Other databases:

- EMBL:   CP001275
- RefSeq:   YP_002522466.1
- ProteinModelPortal:   B9L1J9
- GeneID:   7356440
- GenomeReviews:   CP001275_GR
- KEGG:   tro:trd_1259
- OMA:   GTVDAYW
- ProtClustDB:   CLSK974915
- HAMAP:   MF_00624
- InterPro:   IPR005836
- InterPro:   IPR011831
- InterPro:   IPR023049
- InterPro:   IPR005835
- InterPro:   IPR011004
- TIGRFAMs:   TIGR02091

Pfam domain/function: PF00483 NTP_transferase; SSF51161 Trimer_LpxA_like

EC number: =2.7.7.27

Molecular weight: Translated: 47647; Mature: 47516

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: PS00808 ADP_GLC_PYROPHOSPH_1; PS00809 ADP_GLC_PYROPHOSPH_2; PS00810 ADP_GLC_PYROPHOSPH_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDVAVMILAGGQGERLSILSRQRAKPAVPFGGKYRIIDFALSNCVNSGLYDVAVLTQYR
CCCEEEEEEECCCCCEEHHHHHHCCCCCCCCCCCEEEHHHHHHHHHCCCCEEEEEEECCC
PHSLNEHIGHGRPWDLDRERNGGVVILQPYLGRSTSGWYRGTADAVYHNLFYITRRPYRD
CCCCHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHEEEEEECCCCCE
VLILAGDHVYAMDYRPMIAQHRERCADVTIAVQPVDWREASRFGVVIVAEDGWVVDFEEK
EEEEECCEEEEECCCHHHHHHHHHHCCEEEEEECCCCCCCCCEEEEEEECCCEEEECCCC
PERPRSNLASMGIYLFRRNLLLDLFTRDHPDAPEFIDFGRDVIPYLIRTARVATYRFDGY
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHEEEEEECCE
WQDVGTVQSYWEANMALLEDEPKLNLYDPNWRIHTRSEERPPAKILEGATVIRSLLSNGC
EHHHHHHHHHHHCCEEEECCCCCEEEECCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCC
IVEGATVIRSILSPGVIVKAGAVVRDSIVMTDSVIGPGAVVDRCIIDKHVTIGANAYLGW
EEECHHHHHHHHCCCEEEECCCCCCCCEEEECCCCCCHHHHHHHHHCCCEEECCCEEEEC
GDDNSPNWLEPSRLNTGITLVGRNAVVPPGVRIGRNVLIGPEVKESDFPGAVVPSGETVN
CCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHCCEEEECCCCCCCCCCCCCCCCCCCCC
PIATVVWS
CCEEEEEC
>Mature Secondary Structure 
SDVAVMILAGGQGERLSILSRQRAKPAVPFGGKYRIIDFALSNCVNSGLYDVAVLTQYR
CCEEEEEEECCCCCEEHHHHHHCCCCCCCCCCCEEEHHHHHHHHHCCCCEEEEEEECCC
PHSLNEHIGHGRPWDLDRERNGGVVILQPYLGRSTSGWYRGTADAVYHNLFYITRRPYRD
CCCCHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHEEEEEECCCCCE
VLILAGDHVYAMDYRPMIAQHRERCADVTIAVQPVDWREASRFGVVIVAEDGWVVDFEEK
EEEEECCEEEEECCCHHHHHHHHHHCCEEEEEECCCCCCCCCEEEEEEECCCEEEECCCC
PERPRSNLASMGIYLFRRNLLLDLFTRDHPDAPEFIDFGRDVIPYLIRTARVATYRFDGY
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHEEEEEECCE
WQDVGTVQSYWEANMALLEDEPKLNLYDPNWRIHTRSEERPPAKILEGATVIRSLLSNGC
EHHHHHHHHHHHCCEEEECCCCCEEEECCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCC
IVEGATVIRSILSPGVIVKAGAVVRDSIVMTDSVIGPGAVVDRCIIDKHVTIGANAYLGW
EEECHHHHHHHHCCCEEEECCCCCCCCEEEECCCCCCHHHHHHHHHCCCEEECCCEEEEC
GDDNSPNWLEPSRLNTGITLVGRNAVVPPGVRIGRNVLIGPEVKESDFPGAVVPSGETVN
CCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHCCEEEECCCCCCCCCCCCCCCCCCCCC
PIATVVWS
CCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA