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The map label for this gene is ugpA [C]

Identifier: 221633121

GI number: 221633121

Start: 1122377

End: 1123321

Strand: Reverse

Name: ugpA [C]

Synonym: trd_1137

Alternate gene names: 221633121

Gene position: 1123321-1122377 (Counterclockwise)

Preceding gene: 221633122

Following gene: 221633120

Centisome position: 56.08

GC content: 58.41

Gene sequence:

>945_bases
ATGACGACTGCGCCAGCCAGGACCGCTGTCCAGGCTCTTCCGCTGACCTGGCGCGAGCGAGCCCGCCAGTGGCTCGACAG
CGAGCCGGTTCTCGCCTACCTGTTCATGTCGCCCGGCTGGCTGATCTTGCTCCTGTTCATGAGCTATCCGTTTTTCCTCG
GAATCTGGATCTCGCTGACCGATCGGATGGTCGGATTTCCGGGTGGTGAATTCGTCGGGCTTCGGAACTATCGAGAGCTT
CTGCACGATGGTGTCTTTCGACTGACGGTGATCAACACCTTCATCTATGGCTTCGTGACTGTTCCATTCAAGTTGTTGCT
TGGTCTTCTGCTGGCGCTCCTCTTGAACCAGGTGTTTCCGCTGCGGAATGTGCTGCGCGCGGCTCTCCTGCTTCCGTGGA
TCGTACCGACCGCGCTTTCCAGCCTGGCTTGGCTGATGCTCTACGATGCAGTGTTGAGTCCTTTTTCTTGGATGCTGAAG
AACTGGGGACTCATCGAATCGAACATCGCGTTCCTGGGTACGCGCACGAATGCCATCATTTCTCTCTGTATTGCCAATAT
TTGGCGTGGCACGCCGTTCTTCGCGGTGGCCATTCTGGCCGGCCTGCAGGCGGTGCCGCAGGAACTGCACGAGGCGGCAG
CGATCGAGGGGGCTAATAGCCTGCAGCGGTTCTTCGCGGTGACGCTGCCGGTGATCAAGGGGATCATCGTCATCACCACA
CTCTTCTCGATCATTTGGACGTTCGCGGATTTCCAGCTCGTCTATGTTCTGACGAAAGGTGGGCCAGCGAACTCGACGCA
CATTTTCGGTACCTTCGCCTGGCAAGAGGGGATCGGCGGCGCGGGTAAGCTCGGGATGGGTGCAGCGGTTTCTCTGTACA
TGTTCCCGGTTCTCGCTGTCCTCTCTGCTCTCTTGCTCCGCTACGTTCGTTCGCAGGAGGCCTGA

Upstream 100 bases:

>100_bases
GAAGATTTACAGTCGATGAGCGAGTCCGGGCTGGGGCAGTCGGTATACTGCCCCAGCCCGGCTGATGCACCGCAACGAGC
ATGACGATCGGAGTCACGCC

Downstream 100 bases:

>100_bases
AGTGGTCGGGAGCAATCGGCTGAGCAGTCGGCTCCTCTTTCTCTATCTGCCACTTGCTCTCTTCACGATTTTTCTCCTGT
TCCCCTTCTACTGGATGTTC

Product: putative sugar uptake ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 313

Protein sequence:

>314_residues
MTTAPARTAVQALPLTWRERARQWLDSEPVLAYLFMSPGWLILLLFMSYPFFLGIWISLTDRMVGFPGGEFVGLRNYREL
LHDGVFRLTVINTFIYGFVTVPFKLLLGLLLALLLNQVFPLRNVLRAALLLPWIVPTALSSLAWLMLYDAVLSPFSWMLK
NWGLIESNIAFLGTRTNAIISLCIANIWRGTPFFAVAILAGLQAVPQELHEAAAIEGANSLQRFFAVTLPVIKGIIVITT
LFSIIWTFADFQLVYVLTKGGPANSTHIFGTFAWQEGIGGAGKLGMGAAVSLYMFPVLAVLSALLLRYVRSQEA

Sequences:

>Translated_314_residues
MTTAPARTAVQALPLTWRERARQWLDSEPVLAYLFMSPGWLILLLFMSYPFFLGIWISLTDRMVGFPGGEFVGLRNYREL
LHDGVFRLTVINTFIYGFVTVPFKLLLGLLLALLLNQVFPLRNVLRAALLLPWIVPTALSSLAWLMLYDAVLSPFSWMLK
NWGLIESNIAFLGTRTNAIISLCIANIWRGTPFFAVAILAGLQAVPQELHEAAAIEGANSLQRFFAVTLPVIKGIIVITT
LFSIIWTFADFQLVYVLTKGGPANSTHIFGTFAWQEGIGGAGKLGMGAAVSLYMFPVLAVLSALLLRYVRSQEA
>Mature_313_residues
TTAPARTAVQALPLTWRERARQWLDSEPVLAYLFMSPGWLILLLFMSYPFFLGIWISLTDRMVGFPGGEFVGLRNYRELL
HDGVFRLTVINTFIYGFVTVPFKLLLGLLLALLLNQVFPLRNVLRAALLLPWIVPTALSSLAWLMLYDAVLSPFSWMLKN
WGLIESNIAFLGTRTNAIISLCIANIWRGTPFFAVAILAGLQAVPQELHEAAAIEGANSLQRFFAVTLPVIKGIIVITTL
FSIIWTFADFQLVYVLTKGGPANSTHIFGTFAWQEGIGGAGKLGMGAAVSLYMFPVLAVLSALLLRYVRSQEA

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=295, Percent_Identity=28.8135593220339, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1790465, Length=230, Percent_Identity=28.695652173913, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1787570, Length=231, Percent_Identity=28.1385281385281, Blast_Score=89, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34816; Mature: 34685

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTAPARTAVQALPLTWRERARQWLDSEPVLAYLFMSPGWLILLLFMSYPFFLGIWISLT
CCCCCHHHHHHHCCHHHHHHHHHHCCCCCCEEHHHHCCHHHHHHHHHHHHHHHHHHHHHH
DRMVGFPGGEFVGLRNYRELLHDGVFRLTVINTFIYGFVTVPFKLLLGLLLALLLNQVFP
HHHHCCCCCCEECHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRNVLRAALLLPWIVPTALSSLAWLMLYDAVLSPFSWMLKNWGLIESNIAFLGTRTNAII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEECHHHHHH
SLCIANIWRGTPFFAVAILAGLQAVPQELHEAAAIEGANSLQRFFAVTLPVIKGIIVITT
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
LFSIIWTFADFQLVYVLTKGGPANSTHIFGTFAWQEGIGGAGKLGMGAAVSLYMFPVLAV
HHHHHHHHHHHEEEEEEECCCCCCCCEEEEEEHHHHCCCCCCCCCHHHHHHHHHHHHHHH
LSALLLRYVRSQEA
HHHHHHHHHHHCCC
>Mature Secondary Structure 
TTAPARTAVQALPLTWRERARQWLDSEPVLAYLFMSPGWLILLLFMSYPFFLGIWISLT
CCCCHHHHHHHCCHHHHHHHHHHCCCCCCEEHHHHCCHHHHHHHHHHHHHHHHHHHHHH
DRMVGFPGGEFVGLRNYRELLHDGVFRLTVINTFIYGFVTVPFKLLLGLLLALLLNQVFP
HHHHCCCCCCEECHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRNVLRAALLLPWIVPTALSSLAWLMLYDAVLSPFSWMLKNWGLIESNIAFLGTRTNAII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEECHHHHHH
SLCIANIWRGTPFFAVAILAGLQAVPQELHEAAAIEGANSLQRFFAVTLPVIKGIIVITT
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
LFSIIWTFADFQLVYVLTKGGPANSTHIFGTFAWQEGIGGAGKLGMGAAVSLYMFPVLAV
HHHHHHHHHHHEEEEEEECCCCCCCCEEEEEEHHHHCCCCCCCCCHHHHHHHHHHHHHHH
LSALLLRYVRSQEA
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]