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The map label for this gene is ycjP [H]

Identifier: 221633120

GI number: 221633120

Start: 1121530

End: 1122375

Strand: Reverse

Name: ycjP [H]

Synonym: trd_1136

Alternate gene names: 221633120

Gene position: 1122375-1121530 (Counterclockwise)

Preceding gene: 221633121

Following gene: 221633119

Centisome position: 56.03

GC content: 56.62

Gene sequence:

>846_bases
GTGGTCGGGAGCAATCGGCTGAGCAGTCGGCTCCTCTTTCTCTATCTGCCACTTGCTCTCTTCACGATTTTTCTCCTGTT
CCCCTTCTACTGGATGTTCATTATCTCGCTCAAGCCGAATTCACTTTTGCTCAACATGAAGATCAATCCGCTCTTCTTGA
CACAGGCGACGCTCGACCATTACCGCTATCTTTTGACGAATACCGATTTTCCGCGTTGGGCGTGGAATACCGCAGTGGTG
ACATTCGGTTCGACGTTTCTCTCGCTGACGAGCAGCATCTTGATGGGTTACGCGCTCGGTCGCTTTCGCTTCCGGGGCGG
CAATCTGGCCGGTACTGCGATCTTCCTCGCCTACTTGATTCCGCCGACCCTCCTTTTCATCCCCTTGAGTCAGGTCGTCG
CCCGCTTCGGGCTTTACAACACGTACTGGGCATTGATCCTGACGTACCCGACGTTCCTCATTCCTTTCGCCTCCTGGCTC
TTGATGGGGTACTTCCGCACGATCCCGCGCGAGTTGGAAGAGTGCGCGATGATCGACGGGGCGAGCCGGTTCCAGGCTAT
GTGGCGGATCATCTTGCCGCTGGCTCTCCCCGGAGTGCTCTCTGCTGGTATCTTTTCCTTTACCTTGTCATGGAACGAGT
TCCTCTACGCCCTCGTCTTCATGGGTTCGGGCGAGATGAAGACGATTCCGGTCGGGACGGTGAGCGACCTCATCCGGGCC
GATGTCTTCCAGTGGGGTCCGCTCATGGCAGCCGCCATGCTCGGTTCCGTGCCGGTTGCCATCGCCTACATGTTCTTCGT
CGATCAGTACGTTTCTGGTCTGACGGCTGGTGCAGTGAAAGGATGA

Upstream 100 bases:

>100_bases
AAGCTCGGGATGGGTGCAGCGGTTTCTCTGTACATGTTCCCGGTTCTCGCTGTCCTCTCTGCTCTCTTGCTCCGCTACGT
TCGTTCGCAGGAGGCCTGAA

Downstream 100 bases:

>100_bases
GCAGCTGGATCGCGCACAGGCTTTCCGTATACTAATGGCGGGGCGATCTTCGGCGCGAGTGTGACCGGTTCTGCATGACG
GAGGGTGCAGATGGCCCAAG

Product: inner membrane ABC transporter permease YcjP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MVGSNRLSSRLLFLYLPLALFTIFLLFPFYWMFIISLKPNSLLLNMKINPLFLTQATLDHYRYLLTNTDFPRWAWNTAVV
TFGSTFLSLTSSILMGYALGRFRFRGGNLAGTAIFLAYLIPPTLLFIPLSQVVARFGLYNTYWALILTYPTFLIPFASWL
LMGYFRTIPRELEECAMIDGASRFQAMWRIILPLALPGVLSAGIFSFTLSWNEFLYALVFMGSGEMKTIPVGTVSDLIRA
DVFQWGPLMAAAMLGSVPVAIAYMFFVDQYVSGLTAGAVKG

Sequences:

>Translated_281_residues
MVGSNRLSSRLLFLYLPLALFTIFLLFPFYWMFIISLKPNSLLLNMKINPLFLTQATLDHYRYLLTNTDFPRWAWNTAVV
TFGSTFLSLTSSILMGYALGRFRFRGGNLAGTAIFLAYLIPPTLLFIPLSQVVARFGLYNTYWALILTYPTFLIPFASWL
LMGYFRTIPRELEECAMIDGASRFQAMWRIILPLALPGVLSAGIFSFTLSWNEFLYALVFMGSGEMKTIPVGTVSDLIRA
DVFQWGPLMAAAMLGSVPVAIAYMFFVDQYVSGLTAGAVKG
>Mature_281_residues
MVGSNRLSSRLLFLYLPLALFTIFLLFPFYWMFIISLKPNSLLLNMKINPLFLTQATLDHYRYLLTNTDFPRWAWNTAVV
TFGSTFLSLTSSILMGYALGRFRFRGGNLAGTAIFLAYLIPPTLLFIPLSQVVARFGLYNTYWALILTYPTFLIPFASWL
LMGYFRTIPRELEECAMIDGASRFQAMWRIILPLALPGVLSAGIFSFTLSWNEFLYALVFMGSGEMKTIPVGTVSDLIRA
DVFQWGPLMAAAMLGSVPVAIAYMFFVDQYVSGLTAGAVKG

Specific function: Probably part of the binding-protein-dependent transport system ycjNOP. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=284, Percent_Identity=37.6760563380282, Blast_Score=164, Evalue=9e-42,
Organism=Escherichia coli, GI1790464, Length=300, Percent_Identity=29.3333333333333, Blast_Score=98, Evalue=7e-22,
Organism=Escherichia coli, GI1789860, Length=200, Percent_Identity=27.5, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1787368, Length=154, Percent_Identity=30.5194805194805, Blast_Score=71, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31594; Mature: 31594

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGSNRLSSRLLFLYLPLALFTIFLLFPFYWMFIISLKPNSLLLNMKINPLFLTQATLDH
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEECCEEEEHHHHHHH
YRYLLTNTDFPRWAWNTAVVTFGSTFLSLTSSILMGYALGRFRFRGGNLAGTAIFLAYLI
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHH
PPTLLFIPLSQVVARFGLYNTYWALILTYPTFLIPFASWLLMGYFRTIPRELEECAMIDG
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ASRFQAMWRIILPLALPGVLSAGIFSFTLSWNEFLYALVFMGSGEMKTIPVGTVSDLIRA
HHHHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHCCCCCEEEECCCHHHHHHHH
DVFQWGPLMAAAMLGSVPVAIAYMFFVDQYVSGLTAGAVKG
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MVGSNRLSSRLLFLYLPLALFTIFLLFPFYWMFIISLKPNSLLLNMKINPLFLTQATLDH
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEECCEEEEHHHHHHH
YRYLLTNTDFPRWAWNTAVVTFGSTFLSLTSSILMGYALGRFRFRGGNLAGTAIFLAYLI
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHH
PPTLLFIPLSQVVARFGLYNTYWALILTYPTFLIPFASWLLMGYFRTIPRELEECAMIDG
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ASRFQAMWRIILPLALPGVLSAGIFSFTLSWNEFLYALVFMGSGEMKTIPVGTVSDLIRA
HHHHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHCCCCCEEEECCCHHHHHHHH
DVFQWGPLMAAAMLGSVPVAIAYMFFVDQYVSGLTAGAVKG
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]