The gene/protein map for NC_011959 is currently unavailable.
Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

Click here to switch to the map view.

The map label for this gene is 221633112

Identifier: 221633112

GI number: 221633112

Start: 1113904

End: 1114767

Strand: Reverse

Name: 221633112

Synonym: trd_1128

Alternate gene names: NA

Gene position: 1114767-1113904 (Counterclockwise)

Preceding gene: 221633113

Following gene: 221633111

Centisome position: 55.65

GC content: 60.53

Gene sequence:

>864_bases
ATGGGGAATAAGGGACTCGCGCAGAACCGGCAAGCACTGCTCAAGGCGTTCCAGGCGAGTCTGAAGGCGCGGCCGGGTGT
AGAGTACATCAATTTGGTGATCTTCCGGCCGCTCGGATTCATCGTGGCCTGTGCCCTGTTGCCAACGCGAGTCAAACCAG
AGCAGGTCGTCATTGCTCATACCGGACTCGGTCTCCTGGCAGCTGGGTGCCTGGCTCGTGGCTGGGAGCGAGCGGCGGCA
GTACTCCTCCAGGTGGTAACCGTTCTCGACAATGCCGATGGTCAACTGGCTCGCTTGCGGCAGCAGGAGAGCGAACTGGG
CCGATATCTCGATACCGAACTCGATACGCTGGTCAATACAGCTCTTTTCGCAGCGATCGGATACCGTACACGAGGCTGGC
GAGCGTCATTGGCTGCACTATCGGCCTTTACTGGCCTTCTGAGCTGGGATTTCAATCTCGAGTACTTGTACCGGGTAGCG
AGGGGTGAAGTCTTGCGAGCCGCAGTGCGCGATCCGGATCGTCGGGCGGTCCAGCTCGCTCGCGCTGTCTACCGGCTCGT
CTTCGCACCCCAGGACGCGATGATTCGCTGGCTGGAAGAACTGGGCTTGTGGCTGTCCGTCGGACACCATGCCCGTGAAG
AGCGCGTCAGACGCTCCTGGTGGCATCCGATCGTGGTCACGGTGGCAGCGAACTTGGGTCGTTCGACGCAATATTTGTGG
CTCGGCATCTTCGCGTGGCGACGGCGTCTCGATTCTTACCCAACGTTCGTCCTGAGTCAGCTCTTGATTCCTCTTCTCCT
GACGATCTGGCGCTGGTCCGCCGTCCGGCGTCAGGTGAGCGGTAGACGCGAGGGGATTGTCTAA

Upstream 100 bases:

>100_bases
TTCCGATTCGTCACGGCCGGTAGCGATATCGGCTTCCTCGTGCAAGGAGCGCTGCGTGGCGTCGAACAGCTCGGTCTGAC
TGCACAGGTCGGACGAGGAT

Downstream 100 bases:

>100_bases
CAGGAGTGAGAACCTCAGCGGGCGCTTTCCGGGCAAGGGCTGTGGAGAGCCGGCAAGGTGCTGCGCTGACGGTCCGTTCT
TGCCCCGGGGCTGCGAGTGG

Product: CDP-alcohol phosphatidyltransferase family

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 287; Mature: 286

Protein sequence:

>287_residues
MGNKGLAQNRQALLKAFQASLKARPGVEYINLVIFRPLGFIVACALLPTRVKPEQVVIAHTGLGLLAAGCLARGWERAAA
VLLQVVTVLDNADGQLARLRQQESELGRYLDTELDTLVNTALFAAIGYRTRGWRASLAALSAFTGLLSWDFNLEYLYRVA
RGEVLRAAVRDPDRRAVQLARAVYRLVFAPQDAMIRWLEELGLWLSVGHHAREERVRRSWWHPIVVTVAANLGRSTQYLW
LGIFAWRRRLDSYPTFVLSQLLIPLLLTIWRWSAVRRQVSGRREGIV

Sequences:

>Translated_287_residues
MGNKGLAQNRQALLKAFQASLKARPGVEYINLVIFRPLGFIVACALLPTRVKPEQVVIAHTGLGLLAAGCLARGWERAAA
VLLQVVTVLDNADGQLARLRQQESELGRYLDTELDTLVNTALFAAIGYRTRGWRASLAALSAFTGLLSWDFNLEYLYRVA
RGEVLRAAVRDPDRRAVQLARAVYRLVFAPQDAMIRWLEELGLWLSVGHHAREERVRRSWWHPIVVTVAANLGRSTQYLW
LGIFAWRRRLDSYPTFVLSQLLIPLLLTIWRWSAVRRQVSGRREGIV
>Mature_286_residues
GNKGLAQNRQALLKAFQASLKARPGVEYINLVIFRPLGFIVACALLPTRVKPEQVVIAHTGLGLLAAGCLARGWERAAAV
LLQVVTVLDNADGQLARLRQQESELGRYLDTELDTLVNTALFAAIGYRTRGWRASLAALSAFTGLLSWDFNLEYLYRVAR
GEVLRAAVRDPDRRAVQLARAVYRLVFAPQDAMIRWLEELGLWLSVGHHAREERVRRSWWHPIVVTVAANLGRSTQYLWL
GIFAWRRRLDSYPTFVLSQLLIPLLLTIWRWSAVRRQVSGRREGIV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32462; Mature: 32331

Theoretical pI: Translated: 11.36; Mature: 11.36

Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNKGLAQNRQALLKAFQASLKARPGVEYINLVIFRPLGFIVACALLPTRVKPEQVVIAH
CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE
TGLGLLAAGCLARGWERAAAVLLQVVTVLDNADGQLARLRQQESELGRYLDTELDTLVNT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALFAAIGYRTRGWRASLAALSAFTGLLSWDFNLEYLYRVARGEVLRAAVRDPDRRAVQLA
HHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH
RAVYRLVFAPQDAMIRWLEELGLWLSVGHHAREERVRRSWWHPIVVTVAANLGRSTQYLW
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHH
LGIFAWRRRLDSYPTFVLSQLLIPLLLTIWRWSAVRRQVSGRREGIV
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
GNKGLAQNRQALLKAFQASLKARPGVEYINLVIFRPLGFIVACALLPTRVKPEQVVIAH
CCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE
TGLGLLAAGCLARGWERAAAVLLQVVTVLDNADGQLARLRQQESELGRYLDTELDTLVNT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALFAAIGYRTRGWRASLAALSAFTGLLSWDFNLEYLYRVARGEVLRAAVRDPDRRAVQLA
HHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH
RAVYRLVFAPQDAMIRWLEELGLWLSVGHHAREERVRRSWWHPIVVTVAANLGRSTQYLW
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHH
LGIFAWRRRLDSYPTFVLSQLLIPLLLTIWRWSAVRRQVSGRREGIV
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA