| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is folE [H]
Identifier: 221633111
GI number: 221633111
Start: 1112634
End: 1113257
Strand: Reverse
Name: folE [H]
Synonym: trd_1127
Alternate gene names: 221633111
Gene position: 1113257-1112634 (Counterclockwise)
Preceding gene: 221633112
Following gene: 221633109
Centisome position: 55.58
GC content: 59.62
Gene sequence:
>624_bases ATGCACCATCATGAAGAACTCGTCCACCTCGAGGATACGGGCCTCGAGTTCACGACGACCTGCGATCTGGAGCGTCTGCG CTCGTTGGTTGCCCAGTGGTTGGAAATCATCGGCGAGGATCCGCACCGGGAGGGATTGGTGCGGACACCGCAGCGCGTCG CGGAGGCATGGGCATTCCTGACCCGGGGCTACCGCCAGAATCTCCACGAGATCGTCAATGGCGCGATCTTTCATGTGGAG CAGGATACCATGGTCGTCGTCAAGGGGATCGAGTTTTACTCGATGTGCGAGCACCATCTCCTCCCGTTCTTCGGTCATGT TCACATCGGGTATCTGCCACGCGGCCGCATTCTCGGGTTGAGTAAGTTCGCCCGCATCGTCGATCTCTATGCGCGTCGCT TACAAGTCCAGGAACGTTTGACAAACCAAATCGCGGAAGCGATTGCCGAGCTGCTCGATCCCCAAGGTGTCGCGGTCGTG GCCGATGGCATTCATCTCTGCATGATGATGCGCGGTGTCGAGAAGCAGCACGCGCGCACCACGACCAGCGCCATGCTCGG AGTCTTCCGAGAATCGGCAGCGGCCCGCGAGGAGTTTTACCGTCTCCTCTCCACGAGTTCCTGA
Upstream 100 bases:
>100_bases CGTGCGGTATCCTCTATCGCGCGCTGCTCCGGGCAGAAGATGTATTCGAGCATGAACGGAACGGCGTTGGATGAGCAATG ATTTGGTAAGCGAGGCGGCA
Downstream 100 bases:
>100_bases GTCCAACCACGATTCAATGGCGCCGTGCCGGATCTTGGGCGAGCCAGGCGGCGAGTTCCTGTTGCATCAGGGCAAAGCCA TCGGTACTCGGTGACTGGAA
Product: GTP cyclohydrolase I
Products: NA
Alternate protein names: GTP cyclohydrolase I; GTP-CH-I [H]
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MHHHEELVHLEDTGLEFTTTCDLERLRSLVAQWLEIIGEDPHREGLVRTPQRVAEAWAFLTRGYRQNLHEIVNGAIFHVE QDTMVVVKGIEFYSMCEHHLLPFFGHVHIGYLPRGRILGLSKFARIVDLYARRLQVQERLTNQIAEAIAELLDPQGVAVV ADGIHLCMMMRGVEKQHARTTTSAMLGVFRESAAAREEFYRLLSTSS
Sequences:
>Translated_207_residues MHHHEELVHLEDTGLEFTTTCDLERLRSLVAQWLEIIGEDPHREGLVRTPQRVAEAWAFLTRGYRQNLHEIVNGAIFHVE QDTMVVVKGIEFYSMCEHHLLPFFGHVHIGYLPRGRILGLSKFARIVDLYARRLQVQERLTNQIAEAIAELLDPQGVAVV ADGIHLCMMMRGVEKQHARTTTSAMLGVFRESAAAREEFYRLLSTSS >Mature_207_residues MHHHEELVHLEDTGLEFTTTCDLERLRSLVAQWLEIIGEDPHREGLVRTPQRVAEAWAFLTRGYRQNLHEIVNGAIFHVE QDTMVVVKGIEFYSMCEHHLLPFFGHVHIGYLPRGRILGLSKFARIVDLYARRLQVQERLTNQIAEAIAELLDPQGVAVV ADGIHLCMMMRGVEKQHARTTTSAMLGVFRESAAAREEFYRLLSTSS
Specific function: Tetrahydrofolate biosynthesis; first step. [C]
COG id: COG0302
COG function: function code H; GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family [H]
Homologues:
Organism=Homo sapiens, GI66932968, Length=184, Percent_Identity=54.3478260869565, Blast_Score=220, Evalue=8e-58, Organism=Homo sapiens, GI4503949, Length=184, Percent_Identity=54.3478260869565, Blast_Score=220, Evalue=8e-58, Organism=Homo sapiens, GI66932970, Length=152, Percent_Identity=51.3157894736842, Blast_Score=169, Evalue=2e-42, Organism=Homo sapiens, GI66932972, Length=142, Percent_Identity=54.2253521126761, Blast_Score=167, Evalue=4e-42, Organism=Escherichia coli, GI1788476, Length=195, Percent_Identity=33.8461538461538, Blast_Score=107, Evalue=5e-25, Organism=Caenorhabditis elegans, GI17560486, Length=184, Percent_Identity=53.2608695652174, Blast_Score=215, Evalue=1e-56, Organism=Saccharomyces cerevisiae, GI6321706, Length=186, Percent_Identity=50.5376344086022, Blast_Score=199, Evalue=2e-52, Organism=Drosophila melanogaster, GI24656782, Length=169, Percent_Identity=57.396449704142, Blast_Score=209, Evalue=9e-55, Organism=Drosophila melanogaster, GI24656791, Length=169, Percent_Identity=57.396449704142, Blast_Score=209, Evalue=1e-54, Organism=Drosophila melanogaster, GI24656796, Length=169, Percent_Identity=57.396449704142, Blast_Score=209, Evalue=1e-54,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001474 - InterPro: IPR020602 - InterPro: IPR018234 [H]
Pfam domain/function: PF01227 GTP_cyclohydroI [H]
EC number: =3.5.4.16 [H]
Molecular weight: Translated: 23670; Mature: 23670
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: PS00860 GTP_CYCLOHYDROL_1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHHHEELVHLEDTGLEFTTTCDLERLRSLVAQWLEIIGEDPHREGLVRTPQRVAEAWAFL CCCHHHHHEECCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH TRGYRQNLHEIVNGAIFHVEQDTMVVVKGIEFYSMCEHHLLPFFGHVHIGYLPRGRILGL HHHHHHHHHHHHCCHHEEECCCCEEEEECHHHHHHHHHHHHHHHCCEEECCCCCCCCHHH SKFARIVDLYARRLQVQERLTNQIAEAIAELLDPQGVAVVADGIHLCMMMRGVEKQHART HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHH TTSAMLGVFRESAAAREEFYRLLSTSS HHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MHHHEELVHLEDTGLEFTTTCDLERLRSLVAQWLEIIGEDPHREGLVRTPQRVAEAWAFL CCCHHHHHEECCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH TRGYRQNLHEIVNGAIFHVEQDTMVVVKGIEFYSMCEHHLLPFFGHVHIGYLPRGRILGL HHHHHHHHHHHHCCHHEEECCCCEEEEECHHHHHHHHHHHHHHHCCEEECCCCCCCCHHH SKFARIVDLYARRLQVQERLTNQIAEAIAELLDPQGVAVVADGIHLCMMMRGVEKQHART HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHH TTSAMLGVFRESAAAREEFYRLLSTSS HHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10567266 [H]