| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is adk [H]
Identifier: 221632958
GI number: 221632958
Start: 934646
End: 935347
Strand: Reverse
Name: adk [H]
Synonym: trd_0964
Alternate gene names: 221632958
Gene position: 935347-934646 (Counterclockwise)
Preceding gene: 221632959
Following gene: 221632957
Centisome position: 46.7
GC content: 60.54
Gene sequence:
>702_bases GTGGCTGGACGCTGTCACGTCATCGTGATCGGTCCCCAGGGGTCAGGGAAGGGCACGCAGGCAGCGCGTGTCGCTCCGCT TTTGCGATTGGTGCATGTTGCAACTGGTGACCTCTTCCGGCAGTTGATGACGCGTGACGACGAACTGGCACGCGAGGTTC GCAGCTATTATGATCGTGGCGCGCTGGTTCCGGATGAATTGACGTTGCGCGTGTTGTTGGCTCGGCTCGATGAACTCGAA CGGGAGCAGGGCGATCAGTATCGCGGTGCGCTCCTCGATGGTTATCCACGGAATCTCGCACAGGCGGAAGCACTTGATCG CGTTCTGACGGAGCGAGGTGACGTCATCGCTGCGGTGGTGCACTTGGTGGTACCGCGCGAGGTGCTTATCGAGCGGCTGA GTGGTCGTCTGATCTGTCCAACGTGTGGAGCAACCTATCACGTGCGCTTCTCGCCACCACGAGTCGCCGGCATTTGCGAT CACTGTGGTGGAGCGCTCATGCAACGCAGCGACGATACGCCGGAAGCCATCGCGCGACGTCTCGAAACGTACGAGCAACA GACAGCACCGCTGCTGGACTATTACCGTGCTCGGGATTTGGTCATCGACATCGACGGGAATCGGCCGATCGATGTGGTGA CGCGCGATCTCCTCGTTGCGCTGGAATCACGACTCGCGCACAACCCATGCCGATCGTCCTGA
Upstream 100 bases:
>100_bases GCTCCTGATCGTCGTTGGTGTGGCGATCGATACGATGCGACAGTTGGAAGCGCAGCTCCTCATGCGCAATTACGAAGGGT TCATCCGGTAGGGGGAACGG
Downstream 100 bases:
>100_bases AGTCGCTGCGCGAAATCGACGCTATGCGACGTGCTGGGCAAATCGTCGCCCTTGTTCTCGAGGAACTGCGGGAGAACGTG CGACCGGGGGTGACGACGGG
Product: adenylate kinase
Products: NA
Alternate protein names: AK; ATP-AMP transphosphorylase [H]
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MAGRCHVIVIGPQGSGKGTQAARVAPLLRLVHVATGDLFRQLMTRDDELAREVRSYYDRGALVPDELTLRVLLARLDELE REQGDQYRGALLDGYPRNLAQAEALDRVLTERGDVIAAVVHLVVPREVLIERLSGRLICPTCGATYHVRFSPPRVAGICD HCGGALMQRSDDTPEAIARRLETYEQQTAPLLDYYRARDLVIDIDGNRPIDVVTRDLLVALESRLAHNPCRSS
Sequences:
>Translated_233_residues MAGRCHVIVIGPQGSGKGTQAARVAPLLRLVHVATGDLFRQLMTRDDELAREVRSYYDRGALVPDELTLRVLLARLDELE REQGDQYRGALLDGYPRNLAQAEALDRVLTERGDVIAAVVHLVVPREVLIERLSGRLICPTCGATYHVRFSPPRVAGICD HCGGALMQRSDDTPEAIARRLETYEQQTAPLLDYYRARDLVIDIDGNRPIDVVTRDLLVALESRLAHNPCRSS >Mature_232_residues AGRCHVIVIGPQGSGKGTQAARVAPLLRLVHVATGDLFRQLMTRDDELAREVRSYYDRGALVPDELTLRVLLARLDELER EQGDQYRGALLDGYPRNLAQAEALDRVLTERGDVIAAVVHLVVPREVLIERLSGRLICPTCGATYHVRFSPPRVAGICDH CGGALMQRSDDTPEAIARRLETYEQQTAPLLDYYRARDLVIDIDGNRPIDVVTRDLLVALESRLAHNPCRSS
Specific function: This small ubiquitous enzyme is essential for maintenance and cell growth [H]
COG id: COG0563
COG function: function code F; Adenylate kinase and related kinases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenylate kinase family [H]
Homologues:
Organism=Homo sapiens, GI19923437, Length=200, Percent_Identity=40.5, Blast_Score=159, Evalue=3e-39, Organism=Homo sapiens, GI7524346, Length=214, Percent_Identity=38.3177570093458, Blast_Score=158, Evalue=5e-39, Organism=Homo sapiens, GI4502013, Length=214, Percent_Identity=38.3177570093458, Blast_Score=157, Evalue=5e-39, Organism=Homo sapiens, GI310110345, Length=199, Percent_Identity=37.1859296482412, Blast_Score=141, Evalue=6e-34, Organism=Homo sapiens, GI53832003, Length=199, Percent_Identity=37.1859296482412, Blast_Score=141, Evalue=6e-34, Organism=Homo sapiens, GI8051579, Length=199, Percent_Identity=37.1859296482412, Blast_Score=141, Evalue=6e-34, Organism=Homo sapiens, GI53832001, Length=199, Percent_Identity=37.1859296482412, Blast_Score=141, Evalue=6e-34, Organism=Homo sapiens, GI22749187, Length=189, Percent_Identity=32.2751322751323, Blast_Score=93, Evalue=2e-19, Organism=Homo sapiens, GI7706497, Length=208, Percent_Identity=27.8846153846154, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI28144897, Length=227, Percent_Identity=29.9559471365639, Blast_Score=82, Evalue=3e-16, Organism=Homo sapiens, GI28144899, Length=227, Percent_Identity=29.9559471365639, Blast_Score=82, Evalue=3e-16, Organism=Escherichia coli, GI1786680, Length=216, Percent_Identity=35.1851851851852, Blast_Score=132, Evalue=2e-32, Organism=Caenorhabditis elegans, GI17552384, Length=203, Percent_Identity=37.9310344827586, Blast_Score=147, Evalue=6e-36, Organism=Caenorhabditis elegans, GI17537943, Length=223, Percent_Identity=33.6322869955157, Blast_Score=111, Evalue=3e-25, Organism=Caenorhabditis elegans, GI17533833, Length=212, Percent_Identity=29.7169811320755, Blast_Score=99, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17567503, Length=211, Percent_Identity=28.436018957346, Blast_Score=84, Evalue=5e-17, Organism=Saccharomyces cerevisiae, GI6320432, Length=215, Percent_Identity=37.2093023255814, Blast_Score=156, Evalue=3e-39, Organism=Saccharomyces cerevisiae, GI6321018, Length=207, Percent_Identity=35.7487922705314, Blast_Score=136, Evalue=4e-33, Organism=Saccharomyces cerevisiae, GI6322828, Length=220, Percent_Identity=24.0909090909091, Blast_Score=83, Evalue=3e-17, Organism=Drosophila melanogaster, GI22026816, Length=203, Percent_Identity=38.423645320197, Blast_Score=150, Evalue=1e-36, Organism=Drosophila melanogaster, GI17737899, Length=205, Percent_Identity=37.0731707317073, Blast_Score=145, Evalue=2e-35, Organism=Drosophila melanogaster, GI24645822, Length=205, Percent_Identity=37.0731707317073, Blast_Score=145, Evalue=2e-35,
Paralogues:
None
Copy number: 1640 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 847 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006259 - InterPro: IPR000850 - InterPro: IPR007862 [H]
Pfam domain/function: PF00406 ADK; PF05191 ADK_lid [H]
EC number: =2.7.4.3 [H]
Molecular weight: Translated: 25901; Mature: 25770
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00113 ADENYLATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGRCHVIVIGPQGSGKGTQAARVAPLLRLVHVATGDLFRQLMTRDDELAREVRSYYDRG CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC ALVPDELTLRVLLARLDELEREQGDQYRGALLDGYPRNLAQAEALDRVLTERGDVIAAVV CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHH HLVVPREVLIERLSGRLICPTCGATYHVRFSPPRVAGICDHCGGALMQRSDDTPEAIARR HHHCCHHHHHHHHCCCEEECCCCCEEEEEECCCHHHHHHHHHCHHHHHCCCCCHHHHHHH LETYEQQTAPLLDYYRARDLVIDIDGNRPIDVVTRDLLVALESRLAHNPCRSS HHHHHHHCCHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AGRCHVIVIGPQGSGKGTQAARVAPLLRLVHVATGDLFRQLMTRDDELAREVRSYYDRG CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC ALVPDELTLRVLLARLDELEREQGDQYRGALLDGYPRNLAQAEALDRVLTERGDVIAAVV CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHH HLVVPREVLIERLSGRLICPTCGATYHVRFSPPRVAGICDHCGGALMQRSDDTPEAIARR HHHCCHHHHHHHHCCCEEECCCCCEEEEEECCCHHHHHHHHHCHHHHHCCCCCHHHHHHH LETYEQQTAPLLDYYRARDLVIDIDGNRPIDVVTRDLLVALESRLAHNPCRSS HHHHHHHCCHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11997336 [H]