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The map label for this gene is secY [H]

Identifier: 221632959

GI number: 221632959

Start: 935357

End: 936655

Strand: Reverse

Name: secY [H]

Synonym: trd_0965

Alternate gene names: 221632959

Gene position: 936655-935357 (Counterclockwise)

Preceding gene: 221632960

Following gene: 221632958

Centisome position: 46.76

GC content: 57.04

Gene sequence:

>1299_bases
ATGCTCGAAGCACTCGTCAGTGCCTTCAAGCTTCCTGATCTCCGGCGCAAATTGCTCTTCACGCTGGGAATTCTCATCAT
TTTTCGTTTTGTGGCGACTATTCCGGTTCCCGGCGTGGATCAGCAGGCTCTGAAACGGTTGCTGGAGACGAACCAGTTCC
TGGGCGTGCTCAATCTCTTTTCTGGTAGTACACTGACGAACTTTTCGATCGTCGCTCTCGGAGTGTACCCGTACATCACT
GCTTCGATCGTGATGCAGCTCCTGACACCGGTGATCCCGCGTTTGACCGAACTCTCCAAAGAGGGGGCGCTCGGTCGAGC
GAAGATCAACCAGTACACGCACTGGCTGACCGTGCCGTTGGCCCTGCTCCAGGCGTACGGGCATGCCGCACTGATGAGCA
GCGCGGGAGTGCTGCGCGATTTCGGACTCTTCGACAGTGCGACCTGGCTGCGGAGTTTGGCGCTTCTTCTCACGCTGACG
GCAGGAACGGTGTTTCTCGTCTGGCTCGGTGAGCTGATCACCGAAAACGGTATCGGCAATGGCGTCTCGATCATCATCTT
GGGTGGAATCGTTGCGCAACTCCCCAGCTCCGTGGCCCGCCTCGTAACCGGCGGCACACTGTCCGAAAACCTGATCGGCA
CGGTCGCCTTTTTGGCGATCGGTCTCCTGATCATCGTTGGGATCGTCCTGATCACGGAAGGGCAGCGACGCATCCCGGTG
CAGCATGCGCGACGGGTCCGGCGGGGGCGCGTCTACGGCGGAGGGATGACCTATATTCCACTCAAAGTCAACTCCGCTGG
CATGATTCCGCTGATTTTCGCCATCAGTATCTTGTTGTTGCCGGGCATGATCGCCAACTTCCTGGCAACCTCCGAGATCA
CCTGGTTACGTGATGTCGCGAACGGGATCGCGCGGGTGTTCGATCCCAACAGCCTGCCGTATCAGATCGCTTACTTCGTC
ATGGTCGTGGCGTTCACCTATTTTTACACGATGATCCTCTTTCAGCAGCAGAACATCGCCGAAACGCTTCAGCGCCAAGG
TGCTTTCATACCGGGAATTCGACCTGGACGCGCAACTGATGAATACTTGACCAAGGTGCTCATGCGCATCACGTTGATCG
GTGCGCTGTTTCTGGGAGTTGTGGCGGTCCTTCCGTACATCGTTGCAAAGATCACTGGGGTGACGGTGCTTTTTCTCAGT
TCCACGTCGCTCCTGATCGTCGTTGGTGTGGCGATCGATACGATGCGACAGTTGGAAGCGCAGCTCCTCATGCGCAATTA
CGAAGGGTTCATCCGGTAG

Upstream 100 bases:

>100_bases
GTGACGTGACGCGTCCGCTTCACGTCCAAGCCCATGCCTTCTCGGAGAGCGCTCGGCAGAAGATTCTTGCCGCTGGTGGT
ACGGTGGAGGTCATCAGCTG

Downstream 100 bases:

>100_bases
GGGGAACGGGTGGCTGGACGCTGTCACGTCATCGTGATCGGTCCCCAGGGGTCAGGGAAGGGCACGCAGGCAGCGCGTGT
CGCTCCGCTTTTGCGATTGG

Product: preprotein translocase, SecY subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 432; Mature: 432

Protein sequence:

>432_residues
MLEALVSAFKLPDLRRKLLFTLGILIIFRFVATIPVPGVDQQALKRLLETNQFLGVLNLFSGSTLTNFSIVALGVYPYIT
ASIVMQLLTPVIPRLTELSKEGALGRAKINQYTHWLTVPLALLQAYGHAALMSSAGVLRDFGLFDSATWLRSLALLLTLT
AGTVFLVWLGELITENGIGNGVSIIILGGIVAQLPSSVARLVTGGTLSENLIGTVAFLAIGLLIIVGIVLITEGQRRIPV
QHARRVRRGRVYGGGMTYIPLKVNSAGMIPLIFAISILLLPGMIANFLATSEITWLRDVANGIARVFDPNSLPYQIAYFV
MVVAFTYFYTMILFQQQNIAETLQRQGAFIPGIRPGRATDEYLTKVLMRITLIGALFLGVVAVLPYIVAKITGVTVLFLS
STSLLIVVGVAIDTMRQLEAQLLMRNYEGFIR

Sequences:

>Translated_432_residues
MLEALVSAFKLPDLRRKLLFTLGILIIFRFVATIPVPGVDQQALKRLLETNQFLGVLNLFSGSTLTNFSIVALGVYPYIT
ASIVMQLLTPVIPRLTELSKEGALGRAKINQYTHWLTVPLALLQAYGHAALMSSAGVLRDFGLFDSATWLRSLALLLTLT
AGTVFLVWLGELITENGIGNGVSIIILGGIVAQLPSSVARLVTGGTLSENLIGTVAFLAIGLLIIVGIVLITEGQRRIPV
QHARRVRRGRVYGGGMTYIPLKVNSAGMIPLIFAISILLLPGMIANFLATSEITWLRDVANGIARVFDPNSLPYQIAYFV
MVVAFTYFYTMILFQQQNIAETLQRQGAFIPGIRPGRATDEYLTKVLMRITLIGALFLGVVAVLPYIVAKITGVTVLFLS
STSLLIVVGVAIDTMRQLEAQLLMRNYEGFIR
>Mature_432_residues
MLEALVSAFKLPDLRRKLLFTLGILIIFRFVATIPVPGVDQQALKRLLETNQFLGVLNLFSGSTLTNFSIVALGVYPYIT
ASIVMQLLTPVIPRLTELSKEGALGRAKINQYTHWLTVPLALLQAYGHAALMSSAGVLRDFGLFDSATWLRSLALLLTLT
AGTVFLVWLGELITENGIGNGVSIIILGGIVAQLPSSVARLVTGGTLSENLIGTVAFLAIGLLIIVGIVLITEGQRRIPV
QHARRVRRGRVYGGGMTYIPLKVNSAGMIPLIFAISILLLPGMIANFLATSEITWLRDVANGIARVFDPNSLPYQIAYFV
MVVAFTYFYTMILFQQQNIAETLQRQGAFIPGIRPGRATDEYLTKVLMRITLIGALFLGVVAVLPYIVAKITGVTVLFLS
STSLLIVVGVAIDTMRQLEAQLLMRNYEGFIR

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=426, Percent_Identity=39.906103286385, Blast_Score=261, Evalue=8e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 47108; Mature: 47108

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: PS00755 SECY_1 ; PS00756 SECY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEALVSAFKLPDLRRKLLFTLGILIIFRFVATIPVPGVDQQALKRLLETNQFLGVLNLF
CHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
SGSTLTNFSIVALGVYPYITASIVMQLLTPVIPRLTELSKEGALGRAKINQYTHWLTVPL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
ALLQAYGHAALMSSAGVLRDFGLFDSATWLRSLALLLTLTAGTVFLVWLGELITENGIGN
HHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GVSIIILGGIVAQLPSSVARLVTGGTLSENLIGTVAFLAIGLLIIVGIVLITEGQRRIPV
CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
QHARRVRRGRVYGGGMTYIPLKVNSAGMIPLIFAISILLLPGMIANFLATSEITWLRDVA
HHHHHHHHCCEECCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NGIARVFDPNSLPYQIAYFVMVVAFTYFYTMILFQQQNIAETLQRQGAFIPGIRPGRATD
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCH
EYLTKVLMRITLIGALFLGVVAVLPYIVAKITGVTVLFLSSTSLLIVVGVAIDTMRQLEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHH
QLLMRNYEGFIR
HHHHHHHHHCCC
>Mature Secondary Structure
MLEALVSAFKLPDLRRKLLFTLGILIIFRFVATIPVPGVDQQALKRLLETNQFLGVLNLF
CHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
SGSTLTNFSIVALGVYPYITASIVMQLLTPVIPRLTELSKEGALGRAKINQYTHWLTVPL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
ALLQAYGHAALMSSAGVLRDFGLFDSATWLRSLALLLTLTAGTVFLVWLGELITENGIGN
HHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GVSIIILGGIVAQLPSSVARLVTGGTLSENLIGTVAFLAIGLLIIVGIVLITEGQRRIPV
CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
QHARRVRRGRVYGGGMTYIPLKVNSAGMIPLIFAISILLLPGMIANFLATSEITWLRDVA
HHHHHHHHCCEECCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NGIARVFDPNSLPYQIAYFVMVVAFTYFYTMILFQQQNIAETLQRQGAFIPGIRPGRATD
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCH
EYLTKVLMRITLIGALFLGVVAVLPYIVAKITGVTVLFLSSTSLLIVVGVAIDTMRQLEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHH
QLLMRNYEGFIR
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA