| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is 221632941
Identifier: 221632941
GI number: 221632941
Start: 923034
End: 923447
Strand: Reverse
Name: 221632941
Synonym: trd_0947
Alternate gene names: NA
Gene position: 923447-923034 (Counterclockwise)
Preceding gene: 221632943
Following gene: 221632940
Centisome position: 46.1
GC content: 59.18
Gene sequence:
>414_bases ATGCGGATCCGTTATCACGATCTGGGCGTGAGTCAGGACAAGGTGAACCACATCGTCGAGCGGGAAATACGGGTCTTGGA GAAGAAGCTCGCTGACTTGGAGGACGACCTCAAGTTGCTCGATATCACGGTCGAGCATTTGCAGCGGAGCGATACCTACG TTGCCAAGTTGCATCTTCGGATCCCTGGGCCAGACATCGTGGCGAAGGGAGAGGGGCAAAATCCGGCACAGGCCCTGCGG GATGCTTTTGATGACCTGTACGATGAGCTGGATCGACAACTGGCGAAGTGGCGGAATGAGCCCTTCATCCGCCGCGCCCG TATCCACCCGGGCTTGGCACGGCCGCCGATCGCACCGGTCGAAGAGGAAAGTGCCAGTGAAGGGGAAGAATCGACGCCGG AGCGTGAGCGATGA
Upstream 100 bases:
>100_bases TGACGCGTGAAGATGGGCAAGTCGATACGGCGATCAGGTATGCTGTGTGGCACGATGCATGCCCCGTTTCTGGTGGGGAG TGACACGGGAGGGACAGACG
Downstream 100 bases:
>100_bases GTACGACAGGATGGATGGACACGGAACGACATCGATTGCTCGCTCGGCTGCGCGAGCATCTCGAGACCATCGCTCAGCAG GATCGTGGACTGGAAAGTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MRIRYHDLGVSQDKVNHIVEREIRVLEKKLADLEDDLKLLDITVEHLQRSDTYVAKLHLRIPGPDIVAKGEGQNPAQALR DAFDDLYDELDRQLAKWRNEPFIRRARIHPGLARPPIAPVEEESASEGEESTPERER
Sequences:
>Translated_137_residues MRIRYHDLGVSQDKVNHIVEREIRVLEKKLADLEDDLKLLDITVEHLQRSDTYVAKLHLRIPGPDIVAKGEGQNPAQALR DAFDDLYDELDRQLAKWRNEPFIRRARIHPGLARPPIAPVEEESASEGEESTPERER >Mature_137_residues MRIRYHDLGVSQDKVNHIVEREIRVLEKKLADLEDDLKLLDITVEHLQRSDTYVAKLHLRIPGPDIVAKGEGQNPAQALR DAFDDLYDELDRQLAKWRNEPFIRRARIHPGLARPPIAPVEEESASEGEESTPERER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15836; Mature: 15836
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIRYHDLGVSQDKVNHIVEREIRVLEKKLADLEDDLKLLDITVEHLQRSDTYVAKLHLR CCEECCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCEEEEEEEE IPGPDIVAKGEGQNPAQALRDAFDDLYDELDRQLAKWRNEPFIRRARIHPGLARPPIAPV CCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCC EEESASEGEESTPERER CCCCCCCCCCCCCCCCC >Mature Secondary Structure MRIRYHDLGVSQDKVNHIVEREIRVLEKKLADLEDDLKLLDITVEHLQRSDTYVAKLHLR CCEECCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCEEEEEEEE IPGPDIVAKGEGQNPAQALRDAFDDLYDELDRQLAKWRNEPFIRRARIHPGLARPPIAPV CCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCC EEESASEGEESTPERER CCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA