| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is 221632869
Identifier: 221632869
GI number: 221632869
Start: 847124
End: 847738
Strand: Reverse
Name: 221632869
Synonym: trd_0866
Alternate gene names: NA
Gene position: 847738-847124 (Counterclockwise)
Preceding gene: 221632870
Following gene: 221632862
Centisome position: 42.32
GC content: 59.51
Gene sequence:
>615_bases ATGCATGAGCGACGAATCGGCGAAGTCGTCGAGACTTCGACCGTGCAGTTCGTAGTCGAGTGCGATGAGTTGGATCGGCT TCCCGAATTGGGCTCGTTCGTGCGTGTCGGAGGAACGGATGTCGAGGCGATCTATGGTATCGTAGCTTATGCCGAAACGA CGGCGGTCGACCCTGGCCGACGAGTCGTTCGACGCGGTTCAGGAGAAATCCAGGATCGGGCGCTGTACGAGGCAAACCCA GAACTTCGTTTCGTTCTCCGTTCGCTCTTCGTGGCGGTCGCGATTGCTCACGAACGGAGCGGCCGCCTGTTCTTTCTGTT GCCCCCGTGCCCTCCACCATTGCATTACAGCGTCGAGCTAGTCCCCGCTGAGGAGGTCTGGCGACTGACCGATTCGTGTC GCTACTTTTCCTTCTTGCTTGCAGTGCATGGAGAGGTTCCGGCGGAGCAATTTTTGGCGGCCCATTTGAGTTACGTATTC CGTGCCCGTGGTAACGACGAGAGATGGCTCGAAGGGGCAGCGCAAGAGCTTGCGCGGCTGCTCAAGCGCGACTACGATCG CCTCCGTCAAGTGCTGGAGGCCGTCGAGCCGCTCATCGAACCCCGTCCGCATTAG
Upstream 100 bases:
>100_bases GAAGAGCGGCTGCAGCTCGCCGGCTTGATCGAGCAGTTCTTCGCCCGCAATGGTTTCCTGGAGCAACGCTCGGCGAAGGA GCGGAGCAAGCGGGTGCGGT
Downstream 100 bases:
>100_bases TGCCGGAAGTGACGCTCCCCGGTGAACACCATGGCGATCCCCGCCCGCTCCGCAGCTTCGACGACTTCGCGATCACGCTT GGAGCCTCCAGGCTGAACGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MHERRIGEVVETSTVQFVVECDELDRLPELGSFVRVGGTDVEAIYGIVAYAETTAVDPGRRVVRRGSGEIQDRALYEANP ELRFVLRSLFVAVAIAHERSGRLFFLLPPCPPPLHYSVELVPAEEVWRLTDSCRYFSFLLAVHGEVPAEQFLAAHLSYVF RARGNDERWLEGAAQELARLLKRDYDRLRQVLEAVEPLIEPRPH
Sequences:
>Translated_204_residues MHERRIGEVVETSTVQFVVECDELDRLPELGSFVRVGGTDVEAIYGIVAYAETTAVDPGRRVVRRGSGEIQDRALYEANP ELRFVLRSLFVAVAIAHERSGRLFFLLPPCPPPLHYSVELVPAEEVWRLTDSCRYFSFLLAVHGEVPAEQFLAAHLSYVF RARGNDERWLEGAAQELARLLKRDYDRLRQVLEAVEPLIEPRPH >Mature_204_residues MHERRIGEVVETSTVQFVVECDELDRLPELGSFVRVGGTDVEAIYGIVAYAETTAVDPGRRVVRRGSGEIQDRALYEANP ELRFVLRSLFVAVAIAHERSGRLFFLLPPCPPPLHYSVELVPAEEVWRLTDSCRYFSFLLAVHGEVPAEQFLAAHLSYVF RARGNDERWLEGAAQELARLLKRDYDRLRQVLEAVEPLIEPRPH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23226; Mature: 23226
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHERRIGEVVETSTVQFVVECDELDRLPELGSFVRVGGTDVEAIYGIVAYAETTAVDPGR CCCHHHHHHHHHHHHHEEEEHHHHHCCHHHCCEEEECCCCHHHHHHHHHHHHHHCCCHHH RVVRRGSGEIQDRALYEANPELRFVLRSLFVAVAIAHERSGRLFFLLPPCPPPLHYSVEL HHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEE VPAEEVWRLTDSCRYFSFLLAVHGEVPAEQFLAAHLSYVFRARGNDERWLEGAAQELARL ECHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH LKRDYDRLRQVLEAVEPLIEPRPH HHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MHERRIGEVVETSTVQFVVECDELDRLPELGSFVRVGGTDVEAIYGIVAYAETTAVDPGR CCCHHHHHHHHHHHHHEEEEHHHHHCCHHHCCEEEECCCCHHHHHHHHHHHHHHCCCHHH RVVRRGSGEIQDRALYEANPELRFVLRSLFVAVAIAHERSGRLFFLLPPCPPPLHYSVEL HHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEE VPAEEVWRLTDSCRYFSFLLAVHGEVPAEQFLAAHLSYVFRARGNDERWLEGAAQELARL ECHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH LKRDYDRLRQVLEAVEPLIEPRPH HHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA