Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is 221632862

Identifier: 221632862

GI number: 221632862

Start: 840247

End: 841182

Strand: Reverse

Name: 221632862

Synonym: trd_0859

Alternate gene names: NA

Gene position: 841182-840247 (Counterclockwise)

Preceding gene: 221632869

Following gene: 221632861

Centisome position: 42.0

GC content: 59.72

Gene sequence:

>936_bases
ATGGGAGGTGAGGCCATGCGTGTCGGATACGATCGGCCACTGTACATCCTGGCCTTCGATCACCGGAGTTCCTTCGAGGA
GCTCGCGGCGAAAGCCGGTGTGCCAGAGAGCGAGCGGGCAGCCAAGATCAGTGAAGCAAAGCGTGTCATTTTCGAGGGCT
TCATGGTAGCGGTTGACCGTGGGGCTCCACGTGATGCAGCAGGAATTCTCGTTGACGAGCAGTACGGGGCCGACGTCGCG
CGAGCCGCACGAGAACGCGGCTACATTCTCGCGATGCCGGTCGAAAAGAGCGGTCAGAAGGTGTTCGATTTCGAATATGG
CGAGCAATTCGGTGAGCACATCCTCGCGTTCGATCCGACCTTCAGTAAAGTTCTGGTCCGTTACAACCCCGATGACTCGC
CGGAAACGAAACGCATTCAGCTGGAGCGGCTCAAGCGACTCCACGATTGGCTACGTGAACGCGAACGCCGCTTCTTGCTC
GAGTTGCTGGTTCCAGCGACGAAAGAACAACTGGAGGCTGTCGGAGGTGACAGTGAACGATACGATCGCGAAGTGCGACC
AGAACTCACGCTGCAGGCGATCGACGAGTTTTATGCAGCGGATATCGTTCCGGACATTTGGAAGATCGAAGGGCTCGATC
GTCGAGAAGACTGCGAACGAATGGGTGCGAAGGTTCGAAGCGGTGGGCGCGATGCAGTGAGCTGCGTGGTGCTCGGTCGC
GGGGCTGATGCTGCGCGCGTCGACCATTGGTTGCGCATGGCAGCGGGGGTTCCCGGATACGTCGGTTTCGCGATCGGTCG
CACGCTCTGGTGGGACGGTGTCCAGGGGTACTTGAATGGCACGCTGACGCGCGAGGTTGCCGCAGAGAAGATCGCAGCGA
ATTATCTGCGAGCGATCGACCTCTACGTGTCAGCAGCGCGCGCTCCTGTGGCGTGA

Upstream 100 bases:

>100_bases
TCCCCAATGACTGTTGTGATTCTAGCTGACGCGCCACGATCGTGTCAAGGCTTGCACGGAGTGAGCCGGTGCGCTAGCGT
TGGATCGAGGTTCGATCAGG

Downstream 100 bases:

>100_bases
CCATTTCCCCGATGATCGAAAACGGACGAGAAAGAAGAGGGGCCTGACTGTTTCGAGAGGAGCGGGCCCCTCTGCTCGTT
CAATAGAAAAAGCCGGCTCA

Product: putative IolC myo-catabolism protein

Products: NA

Alternate protein names: Carbohydrate Kinase; PfkB Domain Protein; IolC Protein; Myo-Inositol Catabolism Protein; Sugar Kinase; Fructokinase; Myo-Inositol Catabolism IolC Protein; 5-Dehydro-2-Deoxygluconokinase IolC; Myo-Inositol Catabolism IolC; Ribokinase Family Sugar Kinase; Myo-Inositol Catabolism Protein IolC; IolC Myo-Catabolism Protein; Myoinositol Catabolism Protein Sugar Kinase; Transferase Kinase; 5-Dehydro-2-Deoxygluconokinase; 5-Keto-2-Deoxygluconokinase/ Domain-Containing Protein; Transferase Kinase Protein; Carbohydrate Kinase PfkB

Number of amino acids: Translated: 311; Mature: 310

Protein sequence:

>311_residues
MGGEAMRVGYDRPLYILAFDHRSSFEELAAKAGVPESERAAKISEAKRVIFEGFMVAVDRGAPRDAAGILVDEQYGADVA
RAARERGYILAMPVEKSGQKVFDFEYGEQFGEHILAFDPTFSKVLVRYNPDDSPETKRIQLERLKRLHDWLRERERRFLL
ELLVPATKEQLEAVGGDSERYDREVRPELTLQAIDEFYAADIVPDIWKIEGLDRREDCERMGAKVRSGGRDAVSCVVLGR
GADAARVDHWLRMAAGVPGYVGFAIGRTLWWDGVQGYLNGTLTREVAAEKIAANYLRAIDLYVSAARAPVA

Sequences:

>Translated_311_residues
MGGEAMRVGYDRPLYILAFDHRSSFEELAAKAGVPESERAAKISEAKRVIFEGFMVAVDRGAPRDAAGILVDEQYGADVA
RAARERGYILAMPVEKSGQKVFDFEYGEQFGEHILAFDPTFSKVLVRYNPDDSPETKRIQLERLKRLHDWLRERERRFLL
ELLVPATKEQLEAVGGDSERYDREVRPELTLQAIDEFYAADIVPDIWKIEGLDRREDCERMGAKVRSGGRDAVSCVVLGR
GADAARVDHWLRMAAGVPGYVGFAIGRTLWWDGVQGYLNGTLTREVAAEKIAANYLRAIDLYVSAARAPVA
>Mature_310_residues
GGEAMRVGYDRPLYILAFDHRSSFEELAAKAGVPESERAAKISEAKRVIFEGFMVAVDRGAPRDAAGILVDEQYGADVAR
AARERGYILAMPVEKSGQKVFDFEYGEQFGEHILAFDPTFSKVLVRYNPDDSPETKRIQLERLKRLHDWLRERERRFLLE
LLVPATKEQLEAVGGDSERYDREVRPELTLQAIDEFYAADIVPDIWKIEGLDRREDCERMGAKVRSGGRDAVSCVVLGRG
ADAARVDHWLRMAAGVPGYVGFAIGRTLWWDGVQGYLNGTLTREVAAEKIAANYLRAIDLYVSAARAPVA

Specific function: Unknown

COG id: COG3892

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34857; Mature: 34726

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGEAMRVGYDRPLYILAFDHRSSFEELAAKAGVPESERAAKISEAKRVIFEGFMVAVDR
CCCCCEEECCCCCEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEECC
GAPRDAAGILVDEQYGADVARAARERGYILAMPVEKSGQKVFDFEYGEQFGEHILAFDPT
CCCCCCCCEEEECCCCCHHHHHHHHCCCEEEECCCCCCCEEEEEHHHHHHCCEEEEECCC
FSKVLVRYNPDDSPETKRIQLERLKRLHDWLRERERRFLLELLVPATKEQLEAVGGDSER
HHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHH
YDREVRPELTLQAIDEFYAADIVPDIWKIEGLDRREDCERMGAKVRSGGRDAVSCVVLGR
HCCCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEC
GADAARVDHWLRMAAGVPGYVGFAIGRTLWWDGVQGYLNGTLTREVAAEKIAANYLRAID
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHH
LYVSAARAPVA
HHHHHHCCCCC
>Mature Secondary Structure 
GGEAMRVGYDRPLYILAFDHRSSFEELAAKAGVPESERAAKISEAKRVIFEGFMVAVDR
CCCCEEECCCCCEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEECC
GAPRDAAGILVDEQYGADVARAARERGYILAMPVEKSGQKVFDFEYGEQFGEHILAFDPT
CCCCCCCCEEEECCCCCHHHHHHHHCCCEEEECCCCCCCEEEEEHHHHHHCCEEEEECCC
FSKVLVRYNPDDSPETKRIQLERLKRLHDWLRERERRFLLELLVPATKEQLEAVGGDSER
HHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHH
YDREVRPELTLQAIDEFYAADIVPDIWKIEGLDRREDCERMGAKVRSGGRDAVSCVVLGR
HCCCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEC
GADAARVDHWLRMAAGVPGYVGFAIGRTLWWDGVQGYLNGTLTREVAAEKIAANYLRAID
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHH
LYVSAARAPVA
HHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA