Click here to switch to the map view.

The map label for this gene is 221632665

Identifier: 221632665

GI number: 221632665

Start: 640831

End: 642195

Strand: Reverse

Name: 221632665

Synonym: trd_0648

Alternate gene names: NA

Gene position: 642195-640831 (Counterclockwise)

Preceding gene: 221632666

Following gene: 221632664

Centisome position: 32.06

GC content: 60.73

Gene sequence:

>1365_bases
ATGCCGACTGCGCTTCGCATCGGGATCATCGGTGGCGGTATCGCAGGCTTGACCGCAGCCTACCGTCTCGCGCGCCAGGG
ACACCGGATCGTTCTCTGGGAACGACAGCGGCAGCTCGGTGGACAAGCGGCCGCTTTCCCCTTACTCGGGACAGCGCTGG
AATACTTCTATCATCACCTCTTCCTGAGCGACCGGGATATCGTCCGTTTGCTCGAAGAACTCGGTTTGGCTGATCGGCTC
GTTTGGCTACCCTCTCGGGTCGGCTTCTTCGCCCGCGGACGCATCTATCCGCTCTCGAGTGCGCTCGATGTTCTGCGACT
CGGGGTCGTTCCACTGCCCGATCGCCTGCGTATCGGCCTCGTGACTTTCTACCTCCAGCATGTCCGCGATTGGCAACGCT
TCGAGTACGTGACCGCGGAACAGTGGCTACGCCGCTGGGTCGGACACCGCGCTTTCGAGCGTGTCTGGGGCGCTCAGCTC
CACGCCAAATTCGGTCCGCGCGCCGGGGACGTCGCCATGGCCTGGTTCTGGAACAAAATCTATCTTCGAACGCAGTCTCG
GCGATCGCTTTTCGAGCGCGAGCGGCTCGGCTACATTCTCGGCAGTTTCAATGTCCTGATCGATAGTCTCGCCGCAGCGA
TCCAGGAAGCTGGCGGAGCGATCCACTCGGGAGTCGGGGTCGAGGCGATCGTACGGCATGAGAACAGCTGGCTCGTGCGC
GATTCGAGTGGCGCGACCACGCTGGTCGATGTCATCGTGGCCACCGTCCCCAGTCCGCTCGTCGCCAAACTCTTTCCGCA
ACTTCCTGAGACCTACCGGCACAAGCTGCTCGGTACCACGTACCAAGCAGCCGTCACTCTCCTCCTCCAGTCGCGCCACC
GACTCAGCGATATCTACTGGCTGAATATCGGCGATCCCGATCTCCCGTATACCGGCATCATCGAACACACGAACTTGATA
CCACCGTCCTATTACCAAGGACGTCATCTCATCTACGTGAGCAAATACGTCGAGCAGAGTCATCCTTATCTCGCACTGCG
GGATGAGGAGGTTCTCGCGGCTGCACTGCACCACTTGCCGAAAGTGAATCCATCGTTCTCACCCGAGTGGATCGAGGACT
ACTGGGTTTTTCGAGAGCACGCTGCCCAGCCGATCGTGACCTTGCGCTACAGTGAACAGATCCCGGAGCATCGGACACCG
CTACCCGGCGTCTACGTCGCCAATACCGCGCAGATCTATCCGGAGGATCGTGGCACCAACTACAGCGTGCGCCTCGGCAA
CGTCGTCGCTGCAATGATCGCGGATGACCTGCGTCAGGGCCGGATCGCACCATCCACCAGAGTCAGCGGTTCCTCCGATC
GCTAG

Upstream 100 bases:

>100_bases
TTCAATGCCAGTCAAATCGTCGTCGTCTGGGAAAACCGGGAACTCCATCGATTGTTCGCTCGCTTGCGTCGCCAACACGC
TCCTGCCTGAGGGACACTGC

Downstream 100 bases:

>100_bases
ACGAGAATCGCAATAACCTCCAGCCGTGGGAGCGATAAACCAGCGGTTGACAACGGGCCGGTTTCTCGAGTATGGTGCCC
GTTCGGGCTGGGCAGACCGC

Product: amine oxidase, flavin-containing protein

Products: NA

Alternate protein names: Protoporphyrinogen Oxidase; FAD Dependent Oxidoreductase; Amine Oxidase Flavin-Containing Superfamily; Protoporphyrinogen Oxidase Protein; Amine Oxidase Flavin-Containing Protein

Number of amino acids: Translated: 454; Mature: 453

Protein sequence:

>454_residues
MPTALRIGIIGGGIAGLTAAYRLARQGHRIVLWERQRQLGGQAAAFPLLGTALEYFYHHLFLSDRDIVRLLEELGLADRL
VWLPSRVGFFARGRIYPLSSALDVLRLGVVPLPDRLRIGLVTFYLQHVRDWQRFEYVTAEQWLRRWVGHRAFERVWGAQL
HAKFGPRAGDVAMAWFWNKIYLRTQSRRSLFERERLGYILGSFNVLIDSLAAAIQEAGGAIHSGVGVEAIVRHENSWLVR
DSSGATTLVDVIVATVPSPLVAKLFPQLPETYRHKLLGTTYQAAVTLLLQSRHRLSDIYWLNIGDPDLPYTGIIEHTNLI
PPSYYQGRHLIYVSKYVEQSHPYLALRDEEVLAAALHHLPKVNPSFSPEWIEDYWVFREHAAQPIVTLRYSEQIPEHRTP
LPGVYVANTAQIYPEDRGTNYSVRLGNVVAAMIADDLRQGRIAPSTRVSGSSDR

Sequences:

>Translated_454_residues
MPTALRIGIIGGGIAGLTAAYRLARQGHRIVLWERQRQLGGQAAAFPLLGTALEYFYHHLFLSDRDIVRLLEELGLADRL
VWLPSRVGFFARGRIYPLSSALDVLRLGVVPLPDRLRIGLVTFYLQHVRDWQRFEYVTAEQWLRRWVGHRAFERVWGAQL
HAKFGPRAGDVAMAWFWNKIYLRTQSRRSLFERERLGYILGSFNVLIDSLAAAIQEAGGAIHSGVGVEAIVRHENSWLVR
DSSGATTLVDVIVATVPSPLVAKLFPQLPETYRHKLLGTTYQAAVTLLLQSRHRLSDIYWLNIGDPDLPYTGIIEHTNLI
PPSYYQGRHLIYVSKYVEQSHPYLALRDEEVLAAALHHLPKVNPSFSPEWIEDYWVFREHAAQPIVTLRYSEQIPEHRTP
LPGVYVANTAQIYPEDRGTNYSVRLGNVVAAMIADDLRQGRIAPSTRVSGSSDR
>Mature_453_residues
PTALRIGIIGGGIAGLTAAYRLARQGHRIVLWERQRQLGGQAAAFPLLGTALEYFYHHLFLSDRDIVRLLEELGLADRLV
WLPSRVGFFARGRIYPLSSALDVLRLGVVPLPDRLRIGLVTFYLQHVRDWQRFEYVTAEQWLRRWVGHRAFERVWGAQLH
AKFGPRAGDVAMAWFWNKIYLRTQSRRSLFERERLGYILGSFNVLIDSLAAAIQEAGGAIHSGVGVEAIVRHENSWLVRD
SSGATTLVDVIVATVPSPLVAKLFPQLPETYRHKLLGTTYQAAVTLLLQSRHRLSDIYWLNIGDPDLPYTGIIEHTNLIP
PSYYQGRHLIYVSKYVEQSHPYLALRDEEVLAAALHHLPKVNPSFSPEWIEDYWVFREHAAQPIVTLRYSEQIPEHRTPL
PGVYVANTAQIYPEDRGTNYSVRLGNVVAAMIADDLRQGRIAPSTRVSGSSDR

Specific function: Unknown

COG id: COG1232

COG function: function code H; Protoporphyrinogen oxidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51479; Mature: 51348

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: PS00242 INTEGRIN_ALPHA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTALRIGIIGGGIAGLTAAYRLARQGHRIVLWERQRQLGGQAAAFPLLGTALEYFYHHL
CCCEEEEEEECCCHHHHHHHHHHHHCCCEEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHH
FLSDRDIVRLLEELGLADRLVWLPSRVGFFARGRIYPLSSALDVLRLGVVPLPDRLRIGL
HCCCHHHHHHHHHCCCHHHEECCHHHCCHHHCCCEEEHHHHHHHHHHCCCCCCCHHHHHH
VTFYLQHVRDWQRFEYVTAEQWLRRWVGHRAFERVWGAQLHAKFGPRAGDVAMAWFWNKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHH
YLRTQSRRSLFERERLGYILGSFNVLIDSLAAAIQEAGGAIHSGVGVEAIVRHENSWLVR
EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCEEEEEECCCEEEE
DSSGATTLVDVIVATVPSPLVAKLFPQLPETYRHKLLGTTYQAAVTLLLQSRHRLSDIYW
CCCCCHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEE
LNIGDPDLPYTGIIEHTNLIPPSYYQGRHLIYVSKYVEQSHPYLALRDEEVLAAALHHLP
EECCCCCCCCCCEECCCCCCCCCCCCCCEEEEEEHHHHCCCCEEEECCHHHHHHHHHHCC
KVNPSFSPEWIEDYWVFREHAAQPIVTLRYSEQIPEHRTPLPGVYVANTAQIYPEDRGTN
CCCCCCCHHHHHHHHHHHHHCCCCEEEEEEHHHCCCCCCCCCCEEEECCEEECCCCCCCE
YSVRLGNVVAAMIADDLRQGRIAPSTRVSGSSDR
EEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PTALRIGIIGGGIAGLTAAYRLARQGHRIVLWERQRQLGGQAAAFPLLGTALEYFYHHL
CCEEEEEEECCCHHHHHHHHHHHHCCCEEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHH
FLSDRDIVRLLEELGLADRLVWLPSRVGFFARGRIYPLSSALDVLRLGVVPLPDRLRIGL
HCCCHHHHHHHHHCCCHHHEECCHHHCCHHHCCCEEEHHHHHHHHHHCCCCCCCHHHHHH
VTFYLQHVRDWQRFEYVTAEQWLRRWVGHRAFERVWGAQLHAKFGPRAGDVAMAWFWNKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHH
YLRTQSRRSLFERERLGYILGSFNVLIDSLAAAIQEAGGAIHSGVGVEAIVRHENSWLVR
EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCEEEEEECCCEEEE
DSSGATTLVDVIVATVPSPLVAKLFPQLPETYRHKLLGTTYQAAVTLLLQSRHRLSDIYW
CCCCCHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEE
LNIGDPDLPYTGIIEHTNLIPPSYYQGRHLIYVSKYVEQSHPYLALRDEEVLAAALHHLP
EECCCCCCCCCCEECCCCCCCCCCCCCCEEEEEEHHHHCCCCEEEECCHHHHHHHHHHCC
KVNPSFSPEWIEDYWVFREHAAQPIVTLRYSEQIPEHRTPLPGVYVANTAQIYPEDRGTN
CCCCCCCHHHHHHHHHHHHHCCCCEEEEEEHHHCCCCCCCCCCEEEECCEEECCCCCCCE
YSVRLGNVVAAMIADDLRQGRIAPSTRVSGSSDR
EEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA