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The map label for this gene is secF [H]

Identifier: 221632666

GI number: 221632666

Start: 642206

End: 643129

Strand: Reverse

Name: secF [H]

Synonym: trd_0649

Alternate gene names: 221632666

Gene position: 643129-642206 (Counterclockwise)

Preceding gene: 221632667

Following gene: 221632665

Centisome position: 32.11

GC content: 57.58

Gene sequence:

>924_bases
ATGCTCGATCTGGTCGGTAAGCGGTACTACTGGTTTCTCCTCTCGTTGATCGTCATCATTCCCGGCCTCGTCTCGCTCGC
CGTGCACGGTCTGCGCTTGAGCATCGATTTCACCGGCGGAACACTCTGGGAAATTCAGCTGAGTCGGCCCGTCCAGCCCG
GTGATGTGCGACAGGTTCTCGCCCAAAACGGCATCGATGACGCGATCGTTCAGACAGCCGATAACAATGTCGTTTTGATC
CGTATGCGAGAACTCAAAGAGGGTTCCCCGGAAAAGGAGAAGCTGACTCAGGCTCTCCGCGCCTCGTTCGGCGACATCAC
AGAGCTTCGTCTGGAATCGGTCGGACCGACTCTAGGTACAGCGATCCGGAACCGCGCAATCACCGCCGTTGCGCTGACGA
CGGTCGGTATCTTGCTCTACATAGCCTGGGCTTTCCGGAACACCAACAATCCTTTCCTCTACGGAATCGCTGCCATCATC
GCGATGCTGCACGATGTGGCTGTCGTGCTCGGCGTCTTCTCCATTCTCGGCTGGTTGCGCGGCGTCGAAGTCGATGCTTT
GTTCGTCACAGCCTTACTCACGGTGATCGGCTTTTCGGTTCACGATACGATCGTCGTCTTCGACCGGATCCGCGAAAATC
TCGCCCGTCGGGCAGCTCCGACTTTCGAGCAGATCGTGAACTACAGCCTGGTGCAGACACTCGTCCGCTCGATCAACACC
TCGCTCACGGTCGTGCTGACGCTGCTCGCGCTCTATCTGCTCGGAGGCGAAACGATCCGGACATTCGTGCTCGCCTTGCT
GATCGGTATCGTCAGCGGAACGTACTCATCCATTTTCAATGCCAGTCAAATCGTCGTCGTCTGGGAAAACCGGGAACTCC
ATCGATTGTTCGCTCGCTTGCGTCGCCAACACGCTCCTGCCTGA

Upstream 100 bases:

>100_bases
CTTGTTGACGCGCCATCTGTTCCGCGATGTCCGCTGGTTCGGGATTTCGCCGTCACAGGTCGCGATGGCACCAGCACGCG
GTGACTGAGAGGAAACCTCG

Downstream 100 bases:

>100_bases
GGGACACTGCATGCCGACTGCGCTTCGCATCGGGATCATCGGTGGCGGTATCGCAGGCTTGACCGCAGCCTACCGTCTCG
CGCGCCAGGGACACCGGATC

Product: protein-export membrane protein SecF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MLDLVGKRYYWFLLSLIVIIPGLVSLAVHGLRLSIDFTGGTLWEIQLSRPVQPGDVRQVLAQNGIDDAIVQTADNNVVLI
RMRELKEGSPEKEKLTQALRASFGDITELRLESVGPTLGTAIRNRAITAVALTTVGILLYIAWAFRNTNNPFLYGIAAII
AMLHDVAVVLGVFSILGWLRGVEVDALFVTALLTVIGFSVHDTIVVFDRIRENLARRAAPTFEQIVNYSLVQTLVRSINT
SLTVVLTLLALYLLGGETIRTFVLALLIGIVSGTYSSIFNASQIVVVWENRELHRLFARLRRQHAPA

Sequences:

>Translated_307_residues
MLDLVGKRYYWFLLSLIVIIPGLVSLAVHGLRLSIDFTGGTLWEIQLSRPVQPGDVRQVLAQNGIDDAIVQTADNNVVLI
RMRELKEGSPEKEKLTQALRASFGDITELRLESVGPTLGTAIRNRAITAVALTTVGILLYIAWAFRNTNNPFLYGIAAII
AMLHDVAVVLGVFSILGWLRGVEVDALFVTALLTVIGFSVHDTIVVFDRIRENLARRAAPTFEQIVNYSLVQTLVRSINT
SLTVVLTLLALYLLGGETIRTFVLALLIGIVSGTYSSIFNASQIVVVWENRELHRLFARLRRQHAPA
>Mature_307_residues
MLDLVGKRYYWFLLSLIVIIPGLVSLAVHGLRLSIDFTGGTLWEIQLSRPVQPGDVRQVLAQNGIDDAIVQTADNNVVLI
RMRELKEGSPEKEKLTQALRASFGDITELRLESVGPTLGTAIRNRAITAVALTTVGILLYIAWAFRNTNNPFLYGIAAII
AMLHDVAVVLGVFSILGWLRGVEVDALFVTALLTVIGFSVHDTIVVFDRIRENLARRAAPTFEQIVNYSLVQTLVRSINT
SLTVVLTLLALYLLGGETIRTFVLALLIGIVSGTYSSIFNASQIVVVWENRELHRLFARLRRQHAPA

Specific function: Involved in protein export [H]

COG id: COG0341

COG function: function code U; Preprotein translocase subunit SecF

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secD/secF family. SecF subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786610, Length=309, Percent_Identity=32.0388349514563, Blast_Score=148, Evalue=4e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022813
- InterPro:   IPR022646
- InterPro:   IPR022645
- InterPro:   IPR005665 [H]

Pfam domain/function: PF07549 Sec_GG; PF02355 SecD_SecF [H]

EC number: NA

Molecular weight: Translated: 33927; Mature: 33927

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDLVGKRYYWFLLSLIVIIPGLVSLAVHGLRLSIDFTGGTLWEIQLSRPVQPGDVRQVL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCEEEEEEECCCCCCHHHHHHH
AQNGIDDAIVQTADNNVVLIRMRELKEGSPEKEKLTQALRASFGDITELRLESVGPTLGT
HHCCCCHHHHEECCCCEEEEEEHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCHHHH
AIRNRAITAVALTTVGILLYIAWAFRNTNNPFLYGIAAIIAMLHDVAVVLGVFSILGWLR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVEVDALFVTALLTVIGFSVHDTIVVFDRIRENLARRAAPTFEQIVNYSLVQTLVRSINT
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
SLTVVLTLLALYLLGGETIRTFVLALLIGIVSGTYSSIFNASQIVVVWENRELHRLFARL
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHH
RRQHAPA
HHHCCCC
>Mature Secondary Structure
MLDLVGKRYYWFLLSLIVIIPGLVSLAVHGLRLSIDFTGGTLWEIQLSRPVQPGDVRQVL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCEEEEEEECCCCCCHHHHHHH
AQNGIDDAIVQTADNNVVLIRMRELKEGSPEKEKLTQALRASFGDITELRLESVGPTLGT
HHCCCCHHHHEECCCCEEEEEEHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCHHHH
AIRNRAITAVALTTVGILLYIAWAFRNTNNPFLYGIAAIIAMLHDVAVVLGVFSILGWLR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVEVDALFVTALLTVIGFSVHDTIVVFDRIRENLARRAAPTFEQIVNYSLVQTLVRSINT
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
SLTVVLTLLALYLLGGETIRTFVLALLIGIVSGTYSSIFNASQIVVVWENRELHRLFARL
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHH
RRQHAPA
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]