| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is hisC [H]
Identifier: 221632461
GI number: 221632461
Start: 430766
End: 431848
Strand: Reverse
Name: hisC [H]
Synonym: trd_0435
Alternate gene names: 221632461
Gene position: 431848-430766 (Counterclockwise)
Preceding gene: 221632466
Following gene: 221632460
Centisome position: 21.56
GC content: 63.16
Gene sequence:
>1083_bases GTGGCAGCGAGGCGAGCGGTGCGGGCGAGTATCGAGAACGCGGTGGAATATCTTCCTGTCGAGAGCCGCGAAACGATCGC GGAGCGCCTCGGTGTTCCACCCGAACAGGTGGCCAAGCTCGATGCGAACGAGAACCCGTACGGCCCGCCACCAGCGGTCA TCGCGGCGCTTGCCTCGCTCCCTGACCTGCATCTCTATCCCGACCCCGACCAACGGCGCGCTCGTGCTGCACTCGCGGAC TATACCGGCATGCCAGCTGAACGCATTCTTCTGGGTAATGGATCCGATGAACTCATCGATCTGCTCTTGCTCGTGACGAT CGAGCCTGGCGACGAGGTGGTCGTTCCCGTCCCGAGCTTTGGCGTGTATCTCTCGCGACCACCGCTTTTCGGTGCCCGGG TCATCACCGTACCACGCCGCGAGGACTTCGACCTCGACCTCGAGACGATCGAAGACGCCATCACTCCCCGCACCAAGCTG CTCTTCCTCGCCTCACCGAACAACCCGACCGGCAACCTGGTCACTCCACAGCAACTCTCGCGATTACTCCGCACGGGAAT CCTCGTCGTTCTCGACGAAGCGTACTACGAGTTCGCAGGTCAGACGCTCGCGCCCTTTGCGCGCGAGTTCGAGAATCTCG TGATCCTCCGGACGTTCAGCAAATGGGCCGGGCTCGCTGGGCTCCGCATCGGTTACGGCATCTTCCCTCCCCATCTCGCG GCAGCATTGTGGCGTGTCAAGCAGCCGTTCAATGTCAGCACTGCAGCACAAGCGGCGGTCGAGGCTGCGCTGGCTGACCG CACCTGGCTCATGCAGCGGGTGCTACACGTGCGACTCGAGCGGGGACGTCTCTACCGAGCATTGCGCCGCTACCCCTTCC TCACCCCATACCCGTCGCACGGAAACTTCATTCTCTGCCGCGTGCATGACGGGAGAGCCCACCAGTTGCACGCCCATCTC TTGCAGCACGCGATCGTCGTACGACGCTATGATGACGAGTGGCTCCGCGACTACTTGCGGATCACCGTCGGGACACCCGA GCAGACCGACCGCATTCTCGCCGCCCTCGACACATTCCGGTGA
Upstream 100 bases:
>100_bases TGAGCACCGAGGCCATGAGCAGGCCTCGCACGCCTTGGCACGCTCGGCCGAACACACGGTACTCTTGCTGCGAGAGTGCA ACACACGGAGGGAGGGGCGC
Downstream 100 bases:
>100_bases TGGACAACGAGAGGAGCACGCCGTTGACAGAAATCCGAAGAGCCTCCATTCGGCGCACGACGACCGAGACCGACGTCAGT GTCGATTTGATCATCGATGG
Product: histidinol-phosphate aminotransferase
Products: NA
Alternate protein names: Imidazole acetol-phosphate transaminase [H]
Number of amino acids: Translated: 360; Mature: 359
Protein sequence:
>360_residues MAARRAVRASIENAVEYLPVESRETIAERLGVPPEQVAKLDANENPYGPPPAVIAALASLPDLHLYPDPDQRRARAALAD YTGMPAERILLGNGSDELIDLLLLVTIEPGDEVVVPVPSFGVYLSRPPLFGARVITVPRREDFDLDLETIEDAITPRTKL LFLASPNNPTGNLVTPQQLSRLLRTGILVVLDEAYYEFAGQTLAPFAREFENLVILRTFSKWAGLAGLRIGYGIFPPHLA AALWRVKQPFNVSTAAQAAVEAALADRTWLMQRVLHVRLERGRLYRALRRYPFLTPYPSHGNFILCRVHDGRAHQLHAHL LQHAIVVRRYDDEWLRDYLRITVGTPEQTDRILAALDTFR
Sequences:
>Translated_360_residues MAARRAVRASIENAVEYLPVESRETIAERLGVPPEQVAKLDANENPYGPPPAVIAALASLPDLHLYPDPDQRRARAALAD YTGMPAERILLGNGSDELIDLLLLVTIEPGDEVVVPVPSFGVYLSRPPLFGARVITVPRREDFDLDLETIEDAITPRTKL LFLASPNNPTGNLVTPQQLSRLLRTGILVVLDEAYYEFAGQTLAPFAREFENLVILRTFSKWAGLAGLRIGYGIFPPHLA AALWRVKQPFNVSTAAQAAVEAALADRTWLMQRVLHVRLERGRLYRALRRYPFLTPYPSHGNFILCRVHDGRAHQLHAHL LQHAIVVRRYDDEWLRDYLRITVGTPEQTDRILAALDTFR >Mature_359_residues AARRAVRASIENAVEYLPVESRETIAERLGVPPEQVAKLDANENPYGPPPAVIAALASLPDLHLYPDPDQRRARAALADY TGMPAERILLGNGSDELIDLLLLVTIEPGDEVVVPVPSFGVYLSRPPLFGARVITVPRREDFDLDLETIEDAITPRTKLL FLASPNNPTGNLVTPQQLSRLLRTGILVVLDEAYYEFAGQTLAPFAREFENLVILRTFSKWAGLAGLRIGYGIFPPHLAA ALWRVKQPFNVSTAAQAAVEAALADRTWLMQRVLHVRLERGRLYRALRRYPFLTPYPSHGNFILCRVHDGRAHQLHAHLL QHAIVVRRYDDEWLRDYLRITVGTPEQTDRILAALDTFR
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily [H]
Homologues:
Organism=Homo sapiens, GI56713256, Length=234, Percent_Identity=24.3589743589744, Blast_Score=65, Evalue=8e-11, Organism=Escherichia coli, GI1788332, Length=323, Percent_Identity=33.7461300309598, Blast_Score=152, Evalue=4e-38, Organism=Escherichia coli, GI1788722, Length=292, Percent_Identity=28.0821917808219, Blast_Score=78, Evalue=7e-16, Organism=Escherichia coli, GI1788627, Length=231, Percent_Identity=28.1385281385281, Blast_Score=69, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17567369, Length=252, Percent_Identity=25.3968253968254, Blast_Score=71, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6322075, Length=345, Percent_Identity=31.5942028985507, Blast_Score=146, Evalue=4e-36, Organism=Saccharomyces cerevisiae, GI6322401, Length=230, Percent_Identity=25.6521739130435, Blast_Score=74, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.6.1.9 [H]
Molecular weight: Translated: 40380; Mature: 40249
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAARRAVRASIENAVEYLPVESRETIAERLGVPPEQVAKLDANENPYGPPPAVIAALASL CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHCCCCCCCCCCCHHHHHHHHCC PDLHLYPDPDQRRARAALADYTGMPAERILLGNGSDELIDLLLLVTIEPGDEVVVPVPSF CCCCCCCCCHHHHHHHHHHHHCCCCHHEEEEECCCHHHEEEEEEEEECCCCCEEEECCCC GVYLSRPPLFGARVITVPRREDFDLDLETIEDAITPRTKLLFLASPNNPTGNLVTPQQLS CEEECCCCCCCCEEEEECCCCCCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHH RLLRTGILVVLDEAYYEFAGQTLAPFAREFENLVILRTFSKWAGLAGLRIGYGIFPPHLA HHHHCCEEEEEHHHHHHHCCCHHHHHHHHHCCEEEEEEHHHHHCCCCHHHCCCCCCHHHH AALWRVKQPFNVSTAAQAAVEAALADRTWLMQRVLHVRLERGRLYRALRRYPFLTPYPSH HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC GNFILCRVHDGRAHQLHAHLLQHAIVVRRYDDEWLRDYLRITVGTPEQTDRILAALDTFR CCEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHEEEECCCHHHHHHHHHHHHCC >Mature Secondary Structure AARRAVRASIENAVEYLPVESRETIAERLGVPPEQVAKLDANENPYGPPPAVIAALASL CCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHCCCCCCCCCCCHHHHHHHHCC PDLHLYPDPDQRRARAALADYTGMPAERILLGNGSDELIDLLLLVTIEPGDEVVVPVPSF CCCCCCCCCHHHHHHHHHHHHCCCCHHEEEEECCCHHHEEEEEEEEECCCCCEEEECCCC GVYLSRPPLFGARVITVPRREDFDLDLETIEDAITPRTKLLFLASPNNPTGNLVTPQQLS CEEECCCCCCCCEEEEECCCCCCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHH RLLRTGILVVLDEAYYEFAGQTLAPFAREFENLVILRTFSKWAGLAGLRIGYGIFPPHLA HHHHCCEEEEEHHHHHHHCCCHHHHHHHHHCCEEEEEEHHHHHCCCCHHHCCCCCCHHHH AALWRVKQPFNVSTAAQAAVEAALADRTWLMQRVLHVRLERGRLYRALRRYPFLTPYPSH HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC GNFILCRVHDGRAHQLHAHLLQHAIVVRRYDDEWLRDYLRITVGTPEQTDRILAALDTFR CCEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHEEEECCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA