| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
Click here to switch to the map view.
The map label for this gene is hisB [H]
Identifier: 221632460
GI number: 221632460
Start: 430134
End: 430742
Strand: Reverse
Name: hisB [H]
Synonym: trd_0434
Alternate gene names: 221632460
Gene position: 430742-430134 (Counterclockwise)
Preceding gene: 221632461
Following gene: 221632450
Centisome position: 21.5
GC content: 62.89
Gene sequence:
>609_bases TTGACAGAAATCCGAAGAGCCTCCATTCGGCGCACGACGACCGAGACCGACGTCAGTGTCGATTTGATCATCGATGGAAC CGGACGCTCGAGTGTCGCGACCGGGATCGGTGCACTCGACCATTTCTTGACGCTCTTCGCGCGACACGGGCGCTTCGATA TCGACATCCAGGCGCGCGGTGACCTCCATGTCGATGCGCACCATACGGTGGAGGACGTCGCGCTCTGCCTCGGTCAGGCG CTCCGACGCGCCCTGGGCGACTGGCGCGGTATTCGTCGTATGGCCGATGCGGCTGTGCCGATGGACGAAGCGCTCGCCCA GGTAGCCGTCGATCTCAGCGGGCGCGGCTCGTTTCACTACCGTGACCCCTGGCCAGGTGGGGCCGTCGGCCAACTCGAGG CCGATCTCGTCCGCCACTTTCTGGAGACGCTCGCTCGGGAGGCTCGCATCACGATTCACGTGGTGACACTCTACGGTTCC AACGTTCACCATCAGATCGAAGCGATTTTCAAAGCACTGGCCCGCGCGCTCGATGCCGCCACCGAACTCGATACCCGCAT CGCTGGGCAACTGCCCAGTACCAAGGAACACCTGGAAATTCAGGGGTGA
Upstream 100 bases:
>100_bases GCGACTACTTGCGGATCACCGTCGGGACACCCGAGCAGACCGACCGCATTCTCGCCGCCCTCGACACATTCCGGTGATGG ACAACGAGAGGAGCACGCCG
Downstream 100 bases:
>100_bases GCAGCCTCACGACAGACCGAGCGCACGCCTTTGGACGAGCATGAGTTCGCTGATGCCCCGCTCGGCAAGCCGCAACAGCT GTTCCAGCACCTCGCGTCCG
Product: imidazoleglycerol-phosphate dehydratase
Products: NA
Alternate protein names: IGPD [H]
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MTEIRRASIRRTTTETDVSVDLIIDGTGRSSVATGIGALDHFLTLFARHGRFDIDIQARGDLHVDAHHTVEDVALCLGQA LRRALGDWRGIRRMADAAVPMDEALAQVAVDLSGRGSFHYRDPWPGGAVGQLEADLVRHFLETLAREARITIHVVTLYGS NVHHQIEAIFKALARALDAATELDTRIAGQLPSTKEHLEIQG
Sequences:
>Translated_202_residues MTEIRRASIRRTTTETDVSVDLIIDGTGRSSVATGIGALDHFLTLFARHGRFDIDIQARGDLHVDAHHTVEDVALCLGQA LRRALGDWRGIRRMADAAVPMDEALAQVAVDLSGRGSFHYRDPWPGGAVGQLEADLVRHFLETLAREARITIHVVTLYGS NVHHQIEAIFKALARALDAATELDTRIAGQLPSTKEHLEIQG >Mature_201_residues TEIRRASIRRTTTETDVSVDLIIDGTGRSSVATGIGALDHFLTLFARHGRFDIDIQARGDLHVDAHHTVEDVALCLGQAL RRALGDWRGIRRMADAAVPMDEALAQVAVDLSGRGSFHYRDPWPGGAVGQLEADLVRHFLETLAREARITIHVVTLYGSN VHHQIEAIFKALARALDAATELDTRIAGQLPSTKEHLEIQG
Specific function: Histidine biosynthesis; sixth step. Histidine biosynthesis; eighth step. [C]
COG id: COG0131
COG function: function code E; Imidazoleglycerol-phosphate dehydratase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the imidazoleglycerol-phosphate dehydratase family [H]
Homologues:
Organism=Escherichia coli, GI87082027, Length=192, Percent_Identity=42.7083333333333, Blast_Score=151, Evalue=4e-38, Organism=Saccharomyces cerevisiae, GI6324776, Length=219, Percent_Identity=36.5296803652968, Blast_Score=134, Evalue=1e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000807 - InterPro: IPR020565 - InterPro: IPR020568 [H]
Pfam domain/function: PF00475 IGPD [H]
EC number: =4.2.1.19 [H]
Molecular weight: Translated: 22141; Mature: 22010
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: PS00954 IGP_DEHYDRATASE_1 ; PS00955 IGP_DEHYDRATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEIRRASIRRTTTETDVSVDLIIDGTGRSSVATGIGALDHFLTLFARHGRFDIDIQARG CCCHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECC DLHVDAHHTVEDVALCLGQALRRALGDWRGIRRMADAAVPMDEALAQVAVDLSGRGSFHY CEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCC RDPWPGGAVGQLEADLVRHFLETLAREARITIHVVTLYGSNVHHQIEAIFKALARALDAA CCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHH TELDTRIAGQLPSTKEHLEIQG HHHHHHHHCCCCCCHHCEEECC >Mature Secondary Structure TEIRRASIRRTTTETDVSVDLIIDGTGRSSVATGIGALDHFLTLFARHGRFDIDIQARG CCHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECC DLHVDAHHTVEDVALCLGQALRRALGDWRGIRRMADAAVPMDEALAQVAVDLSGRGSFHY CEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCC RDPWPGGAVGQLEADLVRHFLETLAREARITIHVVTLYGSNVHHQIEAIFKALARALDAA CCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHH TELDTRIAGQLPSTKEHLEIQG HHHHHHHHCCCCCCHHCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA