Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is 221632466

Identifier: 221632466

GI number: 221632466

Start: 435753

End: 436961

Strand: Reverse

Name: 221632466

Synonym: trd_0440

Alternate gene names: NA

Gene position: 436961-435753 (Counterclockwise)

Preceding gene: 221632473

Following gene: 221632461

Centisome position: 21.82

GC content: 58.81

Gene sequence:

>1209_bases
ATGGCTGACTTTCCTGGTAAGGGCAAGGTCGCAGTCCTACGCACGACACCAGAGACCGTCCTCGCCGACATCGGGCGAGC
GATGCTCATGGCCGGTTACCGCGAGGCACTCCCGCGCGATCGCGAGACGATTCTCAAGATCAACATCACCTGGGATACCT
GGTATCCCGGCTGCTCGACGACCCCGTGGCAACTCGAGGGCGTTATCCGTCGCTTGAAAGCCGACGGGTACGGGCATCTC
ATTGCCGCCCACAACCGAACGGTCGTCGTCGATGCCTACAAGGGCGAGCGGAACAACAAGCACAAGTACGTCGTCGACAA
GTACGGCGTCGAAAACGTTCACCTCTACGAGCCACACGTCGAGTGGGTACCCTATGAACCGAAGAGTGAACTCCTCGTCC
TGCACAAGATCTTCCCGGAAGGCATCCGTATTCCCAAGCTCTTCATCGGTCGAAACATCATTCATCTTCCGACCGTGAAG
ACGCACGTCTTCACCACGATCACCGGCGCAATGAAGAACGCGTTCGGTGGACTCCTCAACGAGCGGCGACATTGGACACA
CGCTGTCATTCACGAGACACTCGTCGATCTCCTGACGATCCAACAAGAGATCCACCCTGGCATCTTCGCGGTGATGGACG
GAACCTTCGCGGGGGACGGCCCAGGACCCCGTGCCATGCGTCCTCATGAGAAGGACATCATTCTGGCTAGTGCTGACCAA
GTCGCTATCGACGCCATCAGTGCCAAGTTGCAGGGATTCGATCCGCTCTCCATACCGTTCATTCGCATCGCACACGAACG
AGGGTTGGGGATCGGTGATCCGCGCAAGATCGAAGTCATCGGTGAGGACATTTCCAACGAATCATGGGGATTCGTCGCAG
GAGACACATTCGCGAGCCGCGGCCAGAAGCTGATTTACCACGGCCCACTCAAACCGCTGGAAAATCTCCTCTTGCGCTCG
CCGCTCGTCCCCTGGTCGTATGTCGCTTCCAATGTCTATCACAACGTCTATTGGTACCCAGTGCACGGACGCCGGCGTGT
CAAAGAGGCGCTTCAGACGAAATGGGGACAACTCTTCCTGAGTTACGACGACGGGAAAGTCGTCCTCCCCGGGCCTGACC
CACTCGGTACAGCCATTGTCGTCGGTGGACTCGCCGCGCTCGTTGCCGGCACGATCAGCGTCGCACGGTGGTTGCGCCGG
GACCACTGA

Upstream 100 bases:

>100_bases
TAGCAGGTCGGAGACTGTACGGACAAGGGTCGTTCTGACGAGTGGCAACCGCTGCCACCGCGTGTTACGATCCCTAACCG
TGAAACCGGAGGCTTGGCTC

Downstream 100 bases:

>100_bases
TTAGTCAGCACGAGTCGGAATCCCAGCGTCGCGAACCGACATTGCCCGCCGCACCGCAGGAGCTGTCCCGTCCACCTGAC
GTCGAGCGAGCGTCCGGTAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 402; Mature: 401

Protein sequence:

>402_residues
MADFPGKGKVAVLRTTPETVLADIGRAMLMAGYREALPRDRETILKINITWDTWYPGCSTTPWQLEGVIRRLKADGYGHL
IAAHNRTVVVDAYKGERNNKHKYVVDKYGVENVHLYEPHVEWVPYEPKSELLVLHKIFPEGIRIPKLFIGRNIIHLPTVK
THVFTTITGAMKNAFGGLLNERRHWTHAVIHETLVDLLTIQQEIHPGIFAVMDGTFAGDGPGPRAMRPHEKDIILASADQ
VAIDAISAKLQGFDPLSIPFIRIAHERGLGIGDPRKIEVIGEDISNESWGFVAGDTFASRGQKLIYHGPLKPLENLLLRS
PLVPWSYVASNVYHNVYWYPVHGRRRVKEALQTKWGQLFLSYDDGKVVLPGPDPLGTAIVVGGLAALVAGTISVARWLRR
DH

Sequences:

>Translated_402_residues
MADFPGKGKVAVLRTTPETVLADIGRAMLMAGYREALPRDRETILKINITWDTWYPGCSTTPWQLEGVIRRLKADGYGHL
IAAHNRTVVVDAYKGERNNKHKYVVDKYGVENVHLYEPHVEWVPYEPKSELLVLHKIFPEGIRIPKLFIGRNIIHLPTVK
THVFTTITGAMKNAFGGLLNERRHWTHAVIHETLVDLLTIQQEIHPGIFAVMDGTFAGDGPGPRAMRPHEKDIILASADQ
VAIDAISAKLQGFDPLSIPFIRIAHERGLGIGDPRKIEVIGEDISNESWGFVAGDTFASRGQKLIYHGPLKPLENLLLRS
PLVPWSYVASNVYHNVYWYPVHGRRRVKEALQTKWGQLFLSYDDGKVVLPGPDPLGTAIVVGGLAALVAGTISVARWLRR
DH
>Mature_401_residues
ADFPGKGKVAVLRTTPETVLADIGRAMLMAGYREALPRDRETILKINITWDTWYPGCSTTPWQLEGVIRRLKADGYGHLI
AAHNRTVVVDAYKGERNNKHKYVVDKYGVENVHLYEPHVEWVPYEPKSELLVLHKIFPEGIRIPKLFIGRNIIHLPTVKT
HVFTTITGAMKNAFGGLLNERRHWTHAVIHETLVDLLTIQQEIHPGIFAVMDGTFAGDGPGPRAMRPHEKDIILASADQV
AIDAISAKLQGFDPLSIPFIRIAHERGLGIGDPRKIEVIGEDISNESWGFVAGDTFASRGQKLIYHGPLKPLENLLLRSP
LVPWSYVASNVYHNVYWYPVHGRRRVKEALQTKWGQLFLSYDDGKVVLPGPDPLGTAIVVGGLAALVAGTISVARWLRRD
H

Specific function: Unknown

COG id: COG2006

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44939; Mature: 44808

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADFPGKGKVAVLRTTPETVLADIGRAMLMAGYREALPRDRETILKINITWDTWYPGCST
CCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCC
TPWQLEGVIRRLKADGYGHLIAAHNRTVVVDAYKGERNNKHKYVVDKYGVENVHLYEPHV
CCHHHHHHHHHHHCCCCEEEEEECCCEEEEEECCCCCCCCCEEEEECCCCCEEEEECCCC
EWVPYEPKSELLVLHKIFPEGIRIPKLFIGRNIIHLPTVKTHVFTTITGAMKNAFGGLLN
CCCCCCCCCCEEEEEECCCCCCCCCCHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHH
ERRHWTHAVIHETLVDLLTIQQEIHPGIFAVMDGTFAGDGPGPRAMRPHEKDIILASADQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCH
VAIDAISAKLQGFDPLSIPFIRIAHERGLGIGDPRKIEVIGEDISNESWGFVAGDTFASR
HHHHHHHHHHCCCCCCCCCEEEEEHHCCCCCCCCCEEEEECCCCCCCCCCEEECCHHHHC
GQKLIYHGPLKPLENLLLRSPLVPWSYVASNVYHNVYWYPVHGRRRVKEALQTKWGQLFL
CCEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHCEEEEECCCHHHHHHHHHCCCCEEEE
SYDDGKVVLPGPDPLGTAIVVGGLAALVAGTISVARWLRRDH
EECCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ADFPGKGKVAVLRTTPETVLADIGRAMLMAGYREALPRDRETILKINITWDTWYPGCST
CCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCC
TPWQLEGVIRRLKADGYGHLIAAHNRTVVVDAYKGERNNKHKYVVDKYGVENVHLYEPHV
CCHHHHHHHHHHHCCCCEEEEEECCCEEEEEECCCCCCCCCEEEEECCCCCEEEEECCCC
EWVPYEPKSELLVLHKIFPEGIRIPKLFIGRNIIHLPTVKTHVFTTITGAMKNAFGGLLN
CCCCCCCCCCEEEEEECCCCCCCCCCHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHH
ERRHWTHAVIHETLVDLLTIQQEIHPGIFAVMDGTFAGDGPGPRAMRPHEKDIILASADQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCH
VAIDAISAKLQGFDPLSIPFIRIAHERGLGIGDPRKIEVIGEDISNESWGFVAGDTFASR
HHHHHHHHHHCCCCCCCCCEEEEEHHCCCCCCCCCEEEEECCCCCCCCCCEEECCHHHHC
GQKLIYHGPLKPLENLLLRSPLVPWSYVASNVYHNVYWYPVHGRRRVKEALQTKWGQLFL
CCEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHCEEEEECCCHHHHHHHHHCCCCEEEE
SYDDGKVVLPGPDPLGTAIVVGGLAALVAGTISVARWLRRDH
EECCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA