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The map label for this gene is 221632284

Identifier: 221632284

GI number: 221632284

Start: 257418

End: 258953

Strand: Reverse

Name: 221632284

Synonym: trd_0251

Alternate gene names: NA

Gene position: 258953-257418 (Counterclockwise)

Preceding gene: 221632285

Following gene: 221632283

Centisome position: 12.93

GC content: 62.57

Gene sequence:

>1536_bases
ATGACGAGGAAACTCTCGCGTCGGCAGTTTCTCGGCACCATGCTGGTGGCAGGAGGGAGCGCGCTGCTCGCTGCCTGTCG
CCGCGGTGAGGCGACACCCACCCCTGCTCCATCGGCCGGAACCCCGGCCGCCGGCAAGCAGTTCGAGGGCGTCGAGGTCA
ACGTGATCACCTTCACCGGGCCACAGATCGCCGAGCCGCTGCAGCGTCGCGCGCCCGAGTTCCAAAAGCTCACCGGCGCC
AAGATCAACGTGATCACGGTTCCCTTCGCTGACCTCTACCAGAAGATCTTGACCGACTTCACGACCGGTACCAACAGTTA
TCACGTCATCGTCTTCGCCCCACAGTGGATGGCCGACTACGTCGAGCCCGGCTATCTCGAGGACCTTACCCCGCGCATCG
AAGCCGATCCCGCGCTGCAGTGGGACGATATCGCGCCCTTCTTCCGCAACTTCAGTGCTACCTACGGTGGCCGCATTTAC
ACCATCCCCTTGGACGGCGACTTCCAGATGGTCTATTACCGGACGGACTTGCTCGAGGCCGAAGGGCTCAAGCCACCGGA
GACCTGGGAGGACTATCTCGCTATCGCGCAGAAGTTCCACGGGAAGGACCTGAACGGCGACGGTGTGCCCGACTTCGGCT
CGGGGATCGCCAAGCGCCGCGGAGCCCAGAGCTACTGGATGTTCTGGTCGATCGCCGCTTCGTTCCTGCAGAGTCAGGGA
ACGCAGCAGGGCGCCTTCTTCGATGTCGACACCATGGAACCGCTGACCATGAACGAAGCGTTCGAGCGAGCGCTGGAGAT
TTACAAGGAGACCGGCAAGTACGGGCCACCGGACGAACTGAACTGGGATGTCGGTGACAGCCGTGCTGCCTTCGTCACCG
GGCGCTGCGCGCTCACGCTCGACTGGGGCGATATCGGCACGCTCGCCATCGATCCCGAGCAGTCCAAAGTGAAGGACAAG
GTCGGTGCGGTCATCCTGCCCGGCACCAAGGAGGTGCTCGATCGCAAGGCAGGCAAGCTGGTCGCCTGCGACCAGAACAC
CTGCCCGCACGCGATCAACGGGGTGAACCACGCGCCGTATGCGGCCTTCGGTGGCTGGTCGGGCGCGATCAACAAGAACG
CACCGGCCAAGGTGAAGGACGCGGGTTATGCCTTCCTGTCCTACATGAGCCAACCGGCTCAATCCAACGTCGACGTCACG
ATCGGAAAGACCGGATTCAACCCGTATCGCATTTCCCAGTTCGAGAACATCGATCTCTGGGTCAAGGCCGGGATGAGCGA
GGCGGCTGCCAAGAACTATCTGGGAGCCATCAAGGCGAGCCTCAACAGCCCCAACATGGTACTCGATCTCCGTATCCCCG
GCGCGCAGCGGTACCAGGGCGTTGTGCTCGATACCGTGCTCTCCCGCTATCTCGCCGGCGAACTGACGACCAAGCAAGCC
ATGGAGGAACTGACCAAGGGCTGGAACGAGATCACCGATGAGCTCGGACGCGAGAAGCAGAAGCAGGCCTATCGCGCCAG
CTTGAGCATCCGCTGA

Upstream 100 bases:

>100_bases
CGGCGGCCGACGAGCTTTCCCGACAACTCGGCTTCAGCGGGGTCGATGATCGAGTGATCGATCGGATGGGAATTCCTAGT
TCGAGGAGGAGGGTTGCACC

Downstream 100 bases:

>100_bases
ATGCGTAAGGATCACGTGACTCGTGCGGCAGACTCGACCGAGTGTCTTACCACCACGAACAGGGGATGCGGTCGCGGCAC
CGACCCGCCGCATCCCCCTC

Product: putative ABC transporter solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 511; Mature: 510

Protein sequence:

>511_residues
MTRKLSRRQFLGTMLVAGGSALLAACRRGEATPTPAPSAGTPAAGKQFEGVEVNVITFTGPQIAEPLQRRAPEFQKLTGA
KINVITVPFADLYQKILTDFTTGTNSYHVIVFAPQWMADYVEPGYLEDLTPRIEADPALQWDDIAPFFRNFSATYGGRIY
TIPLDGDFQMVYYRTDLLEAEGLKPPETWEDYLAIAQKFHGKDLNGDGVPDFGSGIAKRRGAQSYWMFWSIAASFLQSQG
TQQGAFFDVDTMEPLTMNEAFERALEIYKETGKYGPPDELNWDVGDSRAAFVTGRCALTLDWGDIGTLAIDPEQSKVKDK
VGAVILPGTKEVLDRKAGKLVACDQNTCPHAINGVNHAPYAAFGGWSGAINKNAPAKVKDAGYAFLSYMSQPAQSNVDVT
IGKTGFNPYRISQFENIDLWVKAGMSEAAAKNYLGAIKASLNSPNMVLDLRIPGAQRYQGVVLDTVLSRYLAGELTTKQA
MEELTKGWNEITDELGREKQKQAYRASLSIR

Sequences:

>Translated_511_residues
MTRKLSRRQFLGTMLVAGGSALLAACRRGEATPTPAPSAGTPAAGKQFEGVEVNVITFTGPQIAEPLQRRAPEFQKLTGA
KINVITVPFADLYQKILTDFTTGTNSYHVIVFAPQWMADYVEPGYLEDLTPRIEADPALQWDDIAPFFRNFSATYGGRIY
TIPLDGDFQMVYYRTDLLEAEGLKPPETWEDYLAIAQKFHGKDLNGDGVPDFGSGIAKRRGAQSYWMFWSIAASFLQSQG
TQQGAFFDVDTMEPLTMNEAFERALEIYKETGKYGPPDELNWDVGDSRAAFVTGRCALTLDWGDIGTLAIDPEQSKVKDK
VGAVILPGTKEVLDRKAGKLVACDQNTCPHAINGVNHAPYAAFGGWSGAINKNAPAKVKDAGYAFLSYMSQPAQSNVDVT
IGKTGFNPYRISQFENIDLWVKAGMSEAAAKNYLGAIKASLNSPNMVLDLRIPGAQRYQGVVLDTVLSRYLAGELTTKQA
MEELTKGWNEITDELGREKQKQAYRASLSIR
>Mature_510_residues
TRKLSRRQFLGTMLVAGGSALLAACRRGEATPTPAPSAGTPAAGKQFEGVEVNVITFTGPQIAEPLQRRAPEFQKLTGAK
INVITVPFADLYQKILTDFTTGTNSYHVIVFAPQWMADYVEPGYLEDLTPRIEADPALQWDDIAPFFRNFSATYGGRIYT
IPLDGDFQMVYYRTDLLEAEGLKPPETWEDYLAIAQKFHGKDLNGDGVPDFGSGIAKRRGAQSYWMFWSIAASFLQSQGT
QQGAFFDVDTMEPLTMNEAFERALEIYKETGKYGPPDELNWDVGDSRAAFVTGRCALTLDWGDIGTLAIDPEQSKVKDKV
GAVILPGTKEVLDRKAGKLVACDQNTCPHAINGVNHAPYAAFGGWSGAINKNAPAKVKDAGYAFLSYMSQPAQSNVDVTI
GKTGFNPYRISQFENIDLWVKAGMSEAAAKNYLGAIKASLNSPNMVLDLRIPGAQRYQGVVLDTVLSRYLAGELTTKQAM
EELTKGWNEITDELGREKQKQAYRASLSIR

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 56115; Mature: 55984

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRKLSRRQFLGTMLVAGGSALLAACRRGEATPTPAPSAGTPAAGKQFEGVEVNVITFTG
CCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECC
PQIAEPLQRRAPEFQKLTGAKINVITVPFADLYQKILTDFTTGTNSYHVIVFAPQWMADY
HHHHHHHHHHCCHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHH
VEPGYLEDLTPRIEADPALQWDDIAPFFRNFSATYGGRIYTIPLDGDFQMVYYRTDLLEA
CCCCCHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEECCCEEEEEEEECHHHC
EGLKPPETWEDYLAIAQKFHGKDLNGDGVPDFGSGIAKRRGAQSYWMFWSIAASFLQSQG
CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
TQQGAFFDVDTMEPLTMNEAFERALEIYKETGKYGPPDELNWDVGDSRAAFVTGRCALTL
CCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEEEEE
DWGDIGTLAIDPEQSKVKDKVGAVILPGTKEVLDRKAGKLVACDQNTCPHAINGVNHAPY
ECCCCCEEEECCCHHHHHHHHCEEEECCCHHHHHHCCCCEEEECCCCCCHHHCCCCCCCC
AAFGGWSGAINKNAPAKVKDAGYAFLSYMSQPAQSNVDVTIGKTGFNPYRISQFENIDLW
EECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEECCCCCCEEE
VKAGMSEAAAKNYLGAIKASLNSPNMVLDLRIPGAQRYQGVVLDTVLSRYLAGELTTKQA
EECCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHCCHHHHHHHHHHHHCCHHHHHH
MEELTKGWNEITDELGREKQKQAYRASLSIR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TRKLSRRQFLGTMLVAGGSALLAACRRGEATPTPAPSAGTPAAGKQFEGVEVNVITFTG
CCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECC
PQIAEPLQRRAPEFQKLTGAKINVITVPFADLYQKILTDFTTGTNSYHVIVFAPQWMADY
HHHHHHHHHHCCHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHH
VEPGYLEDLTPRIEADPALQWDDIAPFFRNFSATYGGRIYTIPLDGDFQMVYYRTDLLEA
CCCCCHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEECCCEEEEEEEECHHHC
EGLKPPETWEDYLAIAQKFHGKDLNGDGVPDFGSGIAKRRGAQSYWMFWSIAASFLQSQG
CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
TQQGAFFDVDTMEPLTMNEAFERALEIYKETGKYGPPDELNWDVGDSRAAFVTGRCALTL
CCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEEEEE
DWGDIGTLAIDPEQSKVKDKVGAVILPGTKEVLDRKAGKLVACDQNTCPHAINGVNHAPY
ECCCCCEEEECCCHHHHHHHHCEEEECCCHHHHHHCCCCEEEECCCCCCHHHCCCCCCCC
AAFGGWSGAINKNAPAKVKDAGYAFLSYMSQPAQSNVDVTIGKTGFNPYRISQFENIDLW
EECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEECCCCCCEEE
VKAGMSEAAAKNYLGAIKASLNSPNMVLDLRIPGAQRYQGVVLDTVLSRYLAGELTTKQA
EECCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHCCHHHHHHHHHHHHCCHHHHHH
MEELTKGWNEITDELGREKQKQAYRASLSIR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]