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The map label for this gene is ugpA [C]

Identifier: 221632283

GI number: 221632283

Start: 256217

End: 257395

Strand: Reverse

Name: ugpA [C]

Synonym: trd_0250

Alternate gene names: 221632283

Gene position: 257395-256217 (Counterclockwise)

Preceding gene: 221632284

Following gene: 221632282

Centisome position: 12.85

GC content: 63.27

Gene sequence:

>1179_bases
GTGCGGCAGACTCGACCGAGTGTCTTACCACCACGAACAGGGGATGCGGTCGCGGCACCGACCCGCCGCATCCCCCTCAG
CCGCGAGCGAGTGGTGAGCTGGGCCGACCAGCAGGCGGGGGCAGTACTGGTCCTCCCAGCCGTACTGGTCATCCTTGTCC
TTTCCATCTTTCCACTCCTGTTCTCGCTCTATCTTTCGCTGTCGCGCTTCCAACCAGTTTCTGGCGGATTCGAGATCCAT
TTCCGGGGGCTCGCCAACTATCGCAAGCTCTTCGTGGGCTCCGAGCAGCAGCACTTCCTCGGTCAGTTAGCCAGGCTCGA
TACGGCCGGTTGGCTGTTCTTCCTGGCCACGGGTGCCCTGACCGTCTTCTTGCTCGGACGCGCGCTGCGTAGCGGCCCGC
TCACTTTCCCTCGTCTGCTCGGCCACGGGACGGTCGCGCTCGGCTTGCTCCTCGCACTGTGGCTCATCAGCCGAACGGTG
GTCAGTGGCGGACGACCCGGCACGCTGGTCGTGACCTGGGTTTACGTCTTCGGCGGCGTCGCGTTGCAATTCCTGGTCGG
ACTGCTGCTCGCCGCGCTCTGCGCCCAGCAGCTACCAGGACGACGCTTCTTCCGCGTCGTCTTTCTCCTCCCCATGATGA
TCACGCCAGTCGGAGTCGCCTATACCTTCCGCATGCTGACCGACACTGGCAAGGGACCGTTCGCCCCGATCGCCAACTGG
CTCGGCTACGCCAACGTCAGCTGGGTCAACGACCCGTGGGGCGCACGCATCGCCGTCATGATCGGTGATCTCTGGCAGTG
GACGCCGTTCATGTTCATCGTCCTCTTGGCAGCACTGGAAAGCCAGTCACCCGAGCCGATCGAAGCGGCGATCGTCGATG
GTGCCAACCGCTGGCAGATCTTCTGGCATATCACGCTTCCCCAAATCGCTCCGGTGGCGAGCACCGTGATCCTGATCCGG
CTCATCGAAGCCTTCAAGATCTTCGATATGCCGAACGTCTTGACTGGTGGGGGACCAGGCACCGCCACGGAATCACTCAC
CCTGCACGCCTACGTGCTCTGGCGATCGCTCGACTACGGCACGTCCGCTGCTGTCGCCTATACGCTCCTCTTCGTCGTCA
CCTTTGTCGGCATCGCGTACGTGCGGCTGCTTCACCGCCGAGTGAGCGAAGCGCTTTAG

Upstream 100 bases:

>100_bases
GGCTGGAACGAGATCACCGATGAGCTCGGACGCGAGAAGCAGAAGCAGGCCTATCGCGCCAGCTTGAGCATCCGCTGAAT
GCGTAAGGATCACGTGACTC

Downstream 100 bases:

>100_bases
GGGGATCGTCATGGCACTCCGCTGGCAGACTAGCCCGACTCGCCCTGGACCCCTCGCCGCCCTCGTGTCCTACGCCATTC
TGTCTCTCTGGGCAGCGGTC

Product: transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 392

Protein sequence:

>392_residues
MRQTRPSVLPPRTGDAVAAPTRRIPLSRERVVSWADQQAGAVLVLPAVLVILVLSIFPLLFSLYLSLSRFQPVSGGFEIH
FRGLANYRKLFVGSEQQHFLGQLARLDTAGWLFFLATGALTVFLLGRALRSGPLTFPRLLGHGTVALGLLLALWLISRTV
VSGGRPGTLVVTWVYVFGGVALQFLVGLLLAALCAQQLPGRRFFRVVFLLPMMITPVGVAYTFRMLTDTGKGPFAPIANW
LGYANVSWVNDPWGARIAVMIGDLWQWTPFMFIVLLAALESQSPEPIEAAIVDGANRWQIFWHITLPQIAPVASTVILIR
LIEAFKIFDMPNVLTGGGPGTATESLTLHAYVLWRSLDYGTSAAVAYTLLFVVTFVGIAYVRLLHRRVSEAL

Sequences:

>Translated_392_residues
MRQTRPSVLPPRTGDAVAAPTRRIPLSRERVVSWADQQAGAVLVLPAVLVILVLSIFPLLFSLYLSLSRFQPVSGGFEIH
FRGLANYRKLFVGSEQQHFLGQLARLDTAGWLFFLATGALTVFLLGRALRSGPLTFPRLLGHGTVALGLLLALWLISRTV
VSGGRPGTLVVTWVYVFGGVALQFLVGLLLAALCAQQLPGRRFFRVVFLLPMMITPVGVAYTFRMLTDTGKGPFAPIANW
LGYANVSWVNDPWGARIAVMIGDLWQWTPFMFIVLLAALESQSPEPIEAAIVDGANRWQIFWHITLPQIAPVASTVILIR
LIEAFKIFDMPNVLTGGGPGTATESLTLHAYVLWRSLDYGTSAAVAYTLLFVVTFVGIAYVRLLHRRVSEAL
>Mature_392_residues
MRQTRPSVLPPRTGDAVAAPTRRIPLSRERVVSWADQQAGAVLVLPAVLVILVLSIFPLLFSLYLSLSRFQPVSGGFEIH
FRGLANYRKLFVGSEQQHFLGQLARLDTAGWLFFLATGALTVFLLGRALRSGPLTFPRLLGHGTVALGLLLALWLISRTV
VSGGRPGTLVVTWVYVFGGVALQFLVGLLLAALCAQQLPGRRFFRVVFLLPMMITPVGVAYTFRMLTDTGKGPFAPIANW
LGYANVSWVNDPWGARIAVMIGDLWQWTPFMFIVLLAALESQSPEPIEAAIVDGANRWQIFWHITLPQIAPVASTVILIR
LIEAFKIFDMPNVLTGGGPGTATESLTLHAYVLWRSLDYGTSAAVAYTLLFVVTFVGIAYVRLLHRRVSEAL

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=206, Percent_Identity=31.0679611650485, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1787570, Length=218, Percent_Identity=28.8990825688073, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1790465, Length=224, Percent_Identity=28.125, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 43037; Mature: 43037

Theoretical pI: Translated: 10.88; Mature: 10.88

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure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CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]