Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is 221632197

Identifier: 221632197

GI number: 221632197

Start: 168348

End: 168770

Strand: Reverse

Name: 221632197

Synonym: trd_0163

Alternate gene names: NA

Gene position: 168770-168348 (Counterclockwise)

Preceding gene: 221632198

Following gene: 221632195

Centisome position: 8.43

GC content: 59.34

Gene sequence:

>423_bases
ATGGACAAGAAAACGCTCATCGATGGACTGAACCAGGATCTGGCGGGCGAATTCCAGGCCATCATCATGTACATCCACTA
CGCTGCCGCAGCGACCGGTGTGGATCGCATCGAACTGGCTGAGTTCTTCCAGAAGGAGATCCAGGACGAGCTTCGTCATG
CGCTGTTCCTGGCCAACAAGATCACTGCGCTCGGCGGCGAGCCGGTCGATGAGCCGCTGCCGGTACCCAGGGCGAACTCG
AATCGGGAAATGATCGAACGGGTGCTGGAAGCAGAGGAACGTACCATCAAGAGCTACGTCGAGCGCATGAAGCAGGCCGA
AGAGTTCGGCGACTACGGCCTGGCGAACGACCTCCAGGAGATCATCTCAGACGAGACGCGCCACAAGGAGGAGTGCGAGA
AACTCCTCCGCGGCGTCGCTTGA

Upstream 100 bases:

>100_bases
TGGATCTGCGCTGGCAACCGGAGCGGGCGACTGCCGCCACTCCCTGAGGCCGCACGAGCTATACTTCCCTCGTCGGGTTC
AGGGAACTGGAGGGAAAACC

Downstream 100 bases:

>100_bases
GCGACGGCCGATCAGCTCGGCTGCCCAGGCTCGCCCAAGCCGACCGCTCGGCGGGCCTGGGCCAGTGCGTCGCTCAACTT
TTGCTGCTCGACTGCGAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: Bacterioferritin; Ferritin-Like Domain-Containing Protein

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MDKKTLIDGLNQDLAGEFQAIIMYIHYAAAATGVDRIELAEFFQKEIQDELRHALFLANKITALGGEPVDEPLPVPRANS
NREMIERVLEAEERTIKSYVERMKQAEEFGDYGLANDLQEIISDETRHKEECEKLLRGVA

Sequences:

>Translated_140_residues
MDKKTLIDGLNQDLAGEFQAIIMYIHYAAAATGVDRIELAEFFQKEIQDELRHALFLANKITALGGEPVDEPLPVPRANS
NREMIERVLEAEERTIKSYVERMKQAEEFGDYGLANDLQEIISDETRHKEECEKLLRGVA
>Mature_140_residues
MDKKTLIDGLNQDLAGEFQAIIMYIHYAAAATGVDRIELAEFFQKEIQDELRHALFLANKITALGGEPVDEPLPVPRANS
NREMIERVLEAEERTIKSYVERMKQAEEFGDYGLANDLQEIISDETRHKEECEKLLRGVA

Specific function: Unknown

COG id: COG1633

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15936; Mature: 15936

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: PS50905 FERRITIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKKTLIDGLNQDLAGEFQAIIMYIHYAAAATGVDRIELAEFFQKEIQDELRHALFLANK
CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ITALGGEPVDEPLPVPRANSNREMIERVLEAEERTIKSYVERMKQAEEFGDYGLANDLQE
HHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
IISDETRHKEECEKLLRGVA
HHHHHHCCHHHHHHHHHCCC
>Mature Secondary Structure
MDKKTLIDGLNQDLAGEFQAIIMYIHYAAAATGVDRIELAEFFQKEIQDELRHALFLANK
CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ITALGGEPVDEPLPVPRANSNREMIERVLEAEERTIKSYVERMKQAEEFGDYGLANDLQE
HHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
IISDETRHKEECEKLLRGVA
HHHHHHCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA