| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is 221632195
Identifier: 221632195
GI number: 221632195
Start: 167325
End: 167579
Strand: Reverse
Name: 221632195
Synonym: trd_0161
Alternate gene names: NA
Gene position: 167579-167325 (Counterclockwise)
Preceding gene: 221632197
Following gene: 221632194
Centisome position: 8.37
GC content: 66.67
Gene sequence:
>255_bases ATGCCGCAGCGCACACGCCCTGTCATCCTGTCTCGCCGATACCCACCGTTCCTGGCTGCCGCCTCGATCGCGGCACGCGG TGTCGTTTCCGATTGCGAGTGGATCGCCCGTTCGATTACCCCCGATCGTCGTGTAAGACGGGATGCCCGACTGGGCCCCA AGACCGTCCTCTCGGCGACCACATCCGCACTCTGGGCACTCGCGTCACTGCCCGTCGACGCGAGGCACCGAAAGTGGGCG ACCGGGCTGGAGTGA
Upstream 100 bases:
>100_bases CATTTCGCCCCCTCCATCATTCGTTTCCAACGAAGCATGAACGAAAGTCGCGGCTGCTCGGCGAGTAGCCTGCTCGGACA GGACCCTTACCCCTGCAACC
Downstream 100 bases:
>100_bases TTCCGAAGCGAGCCAACGCAGCGCGCTGACGAATACCGGGACGAGATCCGGAACGCTCCCCGCTCGATCAGTCTATCGGG CCACTGAACGCCAAGCCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 84; Mature: 83
Protein sequence:
>84_residues MPQRTRPVILSRRYPPFLAAASIAARGVVSDCEWIARSITPDRRVRRDARLGPKTVLSATTSALWALASLPVDARHRKWA TGLE
Sequences:
>Translated_84_residues MPQRTRPVILSRRYPPFLAAASIAARGVVSDCEWIARSITPDRRVRRDARLGPKTVLSATTSALWALASLPVDARHRKWA TGLE >Mature_83_residues PQRTRPVILSRRYPPFLAAASIAARGVVSDCEWIARSITPDRRVRRDARLGPKTVLSATTSALWALASLPVDARHRKWAT GLE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9336; Mature: 9205
Theoretical pI: Translated: 12.16; Mature: 12.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQRTRPVILSRRYPPFLAAASIAARGVVSDCEWIARSITPDRRVRRDARLGPKTVLSAT CCCCCCCEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHH TSALWALASLPVDARHRKWATGLE HHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure PQRTRPVILSRRYPPFLAAASIAARGVVSDCEWIARSITPDRRVRRDARLGPKTVLSAT CCCCCCEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHH TSALWALASLPVDARHRKWATGLE HHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA