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The map label for this gene is yjhC [C]

Identifier: 221232000

GI number: 221232000

Start: 1183894

End: 1185003

Strand: Reverse

Name: yjhC [C]

Synonym: SPN23F_12170

Alternate gene names: 221232000

Gene position: 1185003-1183894 (Counterclockwise)

Preceding gene: 221232001

Following gene: 221231999

Centisome position: 53.35

GC content: 38.74

Gene sequence:

>1110_bases
ATGGTAAATTACGGTATTGTTGGAGCTGGATATTTTGGAGCTGATTTGGCTCGCTCAATGAACAAAATTGAAGATGCAAA
AGTGGTTGCGGTATTTGACCCAAATCATGGAGAAGAAGTTGCTCAAGAGTTGGGATCAGATGTTTGTGCAAGTTTAGATG
AACTTGTAGCACGTGAAGATATTGATTGTGTGATCGTAGCTTCACCTAGCTACCTTCACCGTGAACCTGTTGTGAAAGCT
GCTCAACATGGCAAACACGTATTTTGTGAAAAGCCAATTGCATTGTCTTATGAAGATTGTAAAGCCATGGTTGACGCATG
TAAAGAAAATAATGTTATCTTTATGGCTGGTCACATCATGAACTTCTTTAATGGTGTACACCATGCTAAAGAATTGATTA
CTCAAGGTAAAATCGGTAAAGTTCTTTATTGCCATGCCGCTCGTACAGGTTGGGAAGAACAACAACCAACTGTATCATGG
AAGAAACTTCGTTCTCAATCTGGAGGACATTTGTACCACCATATTCATGAATTAGATTGCATTCAGTTCATCATGGGAGG
ACTTCCTGAAAAAGCGACAATGGTAGGAGGCAATGTATATCATAAAGGTGAAAACTTTGGTGATGAAGATGATATGCTCA
TTGTAAACCTAGAATACTCTGATGATCGTTATGCTGTTTTGGAATATGGTAATGCTTTCCGTTGGGGTGAACACTACGTC
TTGATTCAAGGAACTGAAGGAGCTATCAAACTTGACTTGTTCAATACTGGAGGTACTCTTCGTGTTAAAGGTGAAGGAGA
ATCACACTTCTTAGTACATGAAACTCAAGAGGAAGATGATGACCGTACAGCTATCTATACCGGTCGTGGTATGGATGGAG
CAATTGCGTACGGTAAACCAGGAGTACGTTGCCCATTATGGTTACAAACATGTATTGATAAAGAAATGGAATATCTACAT
GACATCATTAAAGGTGGAGAAATTACAGAAGAATATGAAAAACTTCTCAATGGTGTAGCTGCTTTAGAATCAATCGCTAC
CGCTGATGCATGTACTTTATCAGTTAAAGAAGATCGAAAAGTAAGTCTTTCAGAAATCACAAATGCTTAA

Upstream 100 bases:

>100_bases
TCATATGAAAAATGTTGTACCATATATAACATTTAAGATTGAAGATTTGAAAAAGAATTAAAGCTGAAATTTAAAAATAT
ATAGAAAGAGGATAAAAATT

Downstream 100 bases:

>100_bases
CTATTGTAAAACAGAATAGTAAATTCTTGTCATTATATAATTTCTAAAGTTCTGTGATACAACTCATTGAATAAAGAAAT
AGAGATGGGACTGGGATAAT

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MVNYGIVGAGYFGADLARSMNKIEDAKVVAVFDPNHGEEVAQELGSDVCASLDELVAREDIDCVIVASPSYLHREPVVKA
AQHGKHVFCEKPIALSYEDCKAMVDACKENNVIFMAGHIMNFFNGVHHAKELITQGKIGKVLYCHAARTGWEEQQPTVSW
KKLRSQSGGHLYHHIHELDCIQFIMGGLPEKATMVGGNVYHKGENFGDEDDMLIVNLEYSDDRYAVLEYGNAFRWGEHYV
LIQGTEGAIKLDLFNTGGTLRVKGEGESHFLVHETQEEDDDRTAIYTGRGMDGAIAYGKPGVRCPLWLQTCIDKEMEYLH
DIIKGGEITEEYEKLLNGVAALESIATADACTLSVKEDRKVSLSEITNA

Sequences:

>Translated_369_residues
MVNYGIVGAGYFGADLARSMNKIEDAKVVAVFDPNHGEEVAQELGSDVCASLDELVAREDIDCVIVASPSYLHREPVVKA
AQHGKHVFCEKPIALSYEDCKAMVDACKENNVIFMAGHIMNFFNGVHHAKELITQGKIGKVLYCHAARTGWEEQQPTVSW
KKLRSQSGGHLYHHIHELDCIQFIMGGLPEKATMVGGNVYHKGENFGDEDDMLIVNLEYSDDRYAVLEYGNAFRWGEHYV
LIQGTEGAIKLDLFNTGGTLRVKGEGESHFLVHETQEEDDDRTAIYTGRGMDGAIAYGKPGVRCPLWLQTCIDKEMEYLH
DIIKGGEITEEYEKLLNGVAALESIATADACTLSVKEDRKVSLSEITNA
>Mature_369_residues
MVNYGIVGAGYFGADLARSMNKIEDAKVVAVFDPNHGEEVAQELGSDVCASLDELVAREDIDCVIVASPSYLHREPVVKA
AQHGKHVFCEKPIALSYEDCKAMVDACKENNVIFMAGHIMNFFNGVHHAKELITQGKIGKVLYCHAARTGWEEQQPTVSW
KKLRSQSGGHLYHHIHELDCIQFIMGGLPEKATMVGGNVYHKGENFGDEDDMLIVNLEYSDDRYAVLEYGNAFRWGEHYV
LIQGTEGAIKLDLFNTGGTLRVKGEGESHFLVHETQEEDDDRTAIYTGRGMDGAIAYGKPGVRCPLWLQTCIDKEMEYLH
DIIKGGEITEEYEKLLNGVAALESIATADACTLSVKEDRKVSLSEITNA

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI87082405, Length=366, Percent_Identity=59.5628415300546, Blast_Score=467, Evalue=1e-133,
Organism=Drosophila melanogaster, GI24581117, Length=273, Percent_Identity=26.007326007326, Blast_Score=85, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 40862; Mature: 40862

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNYGIVGAGYFGADLARSMNKIEDAKVVAVFDPNHGEEVAQELGSDVCASLDELVARED
CCCEEEEECCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHCHHHHHHHHHHHHHCC
IDCVIVASPSYLHREPVVKAAQHGKHVFCEKPIALSYEDCKAMVDACKENNVIFMAGHIM
CCEEEEECCCHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEHHHH
NFFNGVHHAKELITQGKIGKVLYCHAARTGWEEQQPTVSWKKLRSQSGGHLYHHIHELDC
HHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHH
IQFIMGGLPEKATMVGGNVYHKGENFGDEDDMLIVNLEYSDDRYAVLEYGNAFRWGEHYV
HHHHHCCCCCCCEEECCCEEECCCCCCCCCCEEEEEEEECCCCEEEEECCCEEECCCEEE
LIQGTEGAIKLDLFNTGGTLRVKGEGESHFLVHETQEEDDDRTAIYTGRGMDGAIAYGKP
EEECCCCEEEEEEEECCCEEEEECCCCCEEEEECCCCCCCCCEEEEECCCCCCEEEECCC
GVRCPLWLQTCIDKEMEYLHDIIKGGEITEEYEKLLNGVAALESIATADACTLSVKEDRK
CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC
VSLSEITNA
EEHHHHCCC
>Mature Secondary Structure
MVNYGIVGAGYFGADLARSMNKIEDAKVVAVFDPNHGEEVAQELGSDVCASLDELVARED
CCCEEEEECCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHCHHHHHHHHHHHHHCC
IDCVIVASPSYLHREPVVKAAQHGKHVFCEKPIALSYEDCKAMVDACKENNVIFMAGHIM
CCEEEEECCCHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEHHHH
NFFNGVHHAKELITQGKIGKVLYCHAARTGWEEQQPTVSWKKLRSQSGGHLYHHIHELDC
HHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHH
IQFIMGGLPEKATMVGGNVYHKGENFGDEDDMLIVNLEYSDDRYAVLEYGNAFRWGEHYV
HHHHHCCCCCCCEEECCCEEECCCCCCCCCCEEEEEEEECCCCEEEEECCCEEECCCEEE
LIQGTEGAIKLDLFNTGGTLRVKGEGESHFLVHETQEEDDDRTAIYTGRGMDGAIAYGKP
EEECCCCEEEEEEEECCCEEEEECCCCCEEEEECCCCCCCCCEEEEECCCCCCEEEECCC
GVRCPLWLQTCIDKEMEYLHDIIKGGEITEEYEKLLNGVAALESIATADACTLSVKEDRK
CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC
VSLSEITNA
EEHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11463916; 8759848 [H]