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The map label for this gene is ycfX [C]

Identifier: 221231999

GI number: 221231999

Start: 1182847

End: 1183737

Strand: Reverse

Name: ycfX [C]

Synonym: SPN23F_12160

Alternate gene names: 221231999

Gene position: 1183737-1182847 (Counterclockwise)

Preceding gene: 221232000

Following gene: 221231998

Centisome position: 53.29

GC content: 33.22

Gene sequence:

>891_bases
ATGAAGATTATAGGGATCGATATTGGCGGAACAACAATTAAGGCAGATTTATACGATGATTTTGGAACGAGTTTAAATCA
GTTCAAAGAGATAGAAACAATTATTGACTATGATTTGGGAACGAACCAGATATTAAATCAGGTCTGTGATTTAATTGGTG
AGTATGTTTTAAATTATTCAATTGATGGTGTTGGGATTTCCACTGCTGGAGTTGTTAATGCTAATACAGGAGAAATCATC
TATGCAGGCTATACAATACCAGGGTATATCGGAGTAAACTTTACTTCCGAAATAGAAAAACGTTTTGGGTTGTCTACTTT
TGTTGAAAATGATGTTAATTGTGCTGCATTAGGTGAATTGTGGGAGGGACAAGCCAAAGATAAGAAAAATGTAGTAATGG
TTACTATTGGAACAGGTATAGGAGGCAGTATTATTGTCAATGGACAAATTGTTAACGGATTTAACTATACTGCTGGTGAA
GTAGGCTATATTCCTGTAGGTAATTCGGATTGGCAAAGCAAAGCCTCAACAACCGCATTGATTCATTTATATCAAAAGAA
GAGCTTGAAAACTAATCAAACTGGACGTACTTTCTTTACTGATTTAAGTTCTGGAGATAAAGTCGCTAAAGAAACTTTTG
AAATTTTTGTAGAAAATCTAACAAAAGGTTTATTAACTATTTCTTATCTACTTAATCCAGAAATTCTCATATTAGGAGGT
GGGATTCTGGCTAAAAAGGATATTTTGTTACCTGAAATTCAAAGTTCTTTAGCTAAAAATGCAATGGATAATAGGTTTTT
GCCTAAAAATGTTGTGGCAGCTACATTAGGAAATGAAGCTGGTCGTATAGGAGCTGTAAAAAATTTCTTAGATAGAATTT
CTAATAAATAG

Upstream 100 bases:

>100_bases
ATACAACTCATTGAATAAAGAAATAGAGATGGGACTGGGATAATGCCCAGTCCCATTTTTTATCAAAAAGTAATGAGATC
AAAAATGTGGGAGTGATGAA

Downstream 100 bases:

>100_bases
TGTGAAAGATAAGGAGGTGTCACAATGACTAACTCTGTATTTTCGACAATGCAAGATATTGAGAATGTTGCAACCGATAT
TATAAAATCATATGATAATG

Product: ROK family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MKIIGIDIGGTTIKADLYDDFGTSLNQFKEIETIIDYDLGTNQILNQVCDLIGEYVLNYSIDGVGISTAGVVNANTGEII
YAGYTIPGYIGVNFTSEIEKRFGLSTFVENDVNCAALGELWEGQAKDKKNVVMVTIGTGIGGSIIVNGQIVNGFNYTAGE
VGYIPVGNSDWQSKASTTALIHLYQKKSLKTNQTGRTFFTDLSSGDKVAKETFEIFVENLTKGLLTISYLLNPEILILGG
GILAKKDILLPEIQSSLAKNAMDNRFLPKNVVAATLGNEAGRIGAVKNFLDRISNK

Sequences:

>Translated_296_residues
MKIIGIDIGGTTIKADLYDDFGTSLNQFKEIETIIDYDLGTNQILNQVCDLIGEYVLNYSIDGVGISTAGVVNANTGEII
YAGYTIPGYIGVNFTSEIEKRFGLSTFVENDVNCAALGELWEGQAKDKKNVVMVTIGTGIGGSIIVNGQIVNGFNYTAGE
VGYIPVGNSDWQSKASTTALIHLYQKKSLKTNQTGRTFFTDLSSGDKVAKETFEIFVENLTKGLLTISYLLNPEILILGG
GILAKKDILLPEIQSSLAKNAMDNRFLPKNVVAATLGNEAGRIGAVKNFLDRISNK
>Mature_296_residues
MKIIGIDIGGTTIKADLYDDFGTSLNQFKEIETIIDYDLGTNQILNQVCDLIGEYVLNYSIDGVGISTAGVVNANTGEII
YAGYTIPGYIGVNFTSEIEKRFGLSTFVENDVNCAALGELWEGQAKDKKNVVMVTIGTGIGGSIIVNGQIVNGFNYTAGE
VGYIPVGNSDWQSKASTTALIHLYQKKSLKTNQTGRTFFTDLSSGDKVAKETFEIFVENLTKGLLTISYLLNPEILILGG
GILAKKDILLPEIQSSLAKNAMDNRFLPKNVVAATLGNEAGRIGAVKNFLDRISNK

Specific function: Unknown

COG id: COG1940

COG function: function code KG; Transcriptional regulator/sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ROK (nagC/xylR) family [H]

Homologues:

Organism=Homo sapiens, GI298566315, Length=264, Percent_Identity=26.1363636363636, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI298566325, Length=167, Percent_Identity=32.3353293413174, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI4885285, Length=264, Percent_Identity=26.1363636363636, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI190014632, Length=167, Percent_Identity=32.3353293413174, Blast_Score=69, Evalue=4e-12,
Organism=Escherichia coli, GI1787363, Length=307, Percent_Identity=26.0586319218241, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1786891, Length=243, Percent_Identity=26.3374485596708, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI87081733, Length=257, Percent_Identity=26.0700389105058, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000600 [H]

Pfam domain/function: PF00480 ROK [H]

EC number: NA

Molecular weight: Translated: 31914; Mature: 31914

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIIGIDIGGTTIKADLYDDFGTSLNQFKEIETIIDYDLGTNQILNQVCDLIGEYVLNYS
CEEEEEECCCEEEEEECHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCE
IDGVGISTAGVVNANTGEIIYAGYTIPGYIGVNFTSEIEKRFGLSTFVENDVNCAALGEL
ECCCCCCCCCEEECCCCCEEEEEECCCCEEECCHHHHHHHHCCCHHHHCCCCCCEEHHHH
WEGQAKDKKNVVMVTIGTGIGGSIIVNGQIVNGFNYTAGEVGYIPVGNSDWQSKASTTAL
HCCCCCCCCCEEEEEEECCCCCEEEEECEEECCCCCCCCCEEEEECCCCCCHHHHHHHHE
IHLYQKKSLKTNQTGRTFFTDLSSGDKVAKETFEIFVENLTKGLLTISYLLNPEILILGG
EEEEHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC
GILAKKDILLPEIQSSLAKNAMDNRFLPKNVVAATLGNEAGRIGAVKNFLDRISNK
CEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MKIIGIDIGGTTIKADLYDDFGTSLNQFKEIETIIDYDLGTNQILNQVCDLIGEYVLNYS
CEEEEEECCCEEEEEECHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCE
IDGVGISTAGVVNANTGEIIYAGYTIPGYIGVNFTSEIEKRFGLSTFVENDVNCAALGEL
ECCCCCCCCCEEECCCCCEEEEEECCCCEEECCHHHHHHHHCCCHHHHCCCCCCEEHHHH
WEGQAKDKKNVVMVTIGTGIGGSIIVNGQIVNGFNYTAGEVGYIPVGNSDWQSKASTTAL
HCCCCCCCCCEEEEEEECCCCCEEEEECEEECCCCCCCCCEEEEECCCCCCHHHHHHHHE
IHLYQKKSLKTNQTGRTFFTDLSSGDKVAKETFEIFVENLTKGLLTISYLLNPEILILGG
EEEEHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC
GILAKKDILLPEIQSSLAKNAMDNRFLPKNVVAATLGNEAGRIGAVKNFLDRISNK
CEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11792842; 8177218 [H]