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The map label for this gene is yvdE [H]

Identifier: 220933021

GI number: 220933021

Start: 2379723

End: 2380418

Strand: Reverse

Name: yvdE [H]

Synonym: Hore_21880

Alternate gene names: 220933021

Gene position: 2380418-2379723 (Counterclockwise)

Preceding gene: 220933022

Following gene: 220933020

Centisome position: 92.33

GC content: 43.39

Gene sequence:

>696_bases
ATGGCGGTTATTGGAATCACATCAGGCCAGCAGAAAAATGGAACCGAATGCCGCATACCTAAAACATATGTTAAGGCTAT
TGTCAGGGCCGGGGGGGTACCACTGGTCCTGCCGGTATTGACAAATAAAGATATCTTAAAGAAATATATAGAGCTAATAG
ACGGGCTTTTGTTGACCGGCGGTGGTGACCCGGATCCCCGTTATTTCTATGAAGAACCCCGTCCTGGCCTGGGAGAGGTT
GATCCACAGCGGGACGAATTTGAAATATTAATTACAGGCCTTGCTTTAAATACAGGTTTACCTCTACTGGGAATCTGCCG
TGGCTGCCAGTTGATCAATATAGTTGAAGGGGGTACCCTTTATCAGGACCTGGAAAAAGAATACCCTAATCCCCTGAAAC
ATAATCAGTCTTCTCCGGGAAAATACCCGTTTCATACCGTACATGTAAAAAAAGAGTCCTGGCTATACTCAATTTCCAAA
ATGACTAATTTTCGTGTTAACAGTGTTCATCATCAGGCGATTAAGGAGGTCGCTCCAGGTTATAAAGCCACTGCTCTGGC
AGAAGATGGGGTTATAGAGGCTATTGAAAAATCAGGAGATGGATTTGTTTTCGGGGTTCAATGGCATCCGGAACAGATGG
TTAATGATAGTGTCAGTTTAAAAATATTTACTGAATTTGTTAACCGGGTGGATTAA

Upstream 100 bases:

>100_bases
GGGAAAATATCAGGTTTTTATCCCGGTTATTGAAGTAATTAAAAAGTTTTTTAAAAAAGCTTAAGCAGCAATTAAAAAAA
TTAAGGAGCAGGTGAAATTT

Downstream 100 bases:

>100_bases
GGGACAAAATTCCAGTAAAAAGAGGGAGGAAATTAAAGAGTCGATAGATAATTATTAAAAAAAGGAGACAATTCATACTT
TTTTGAAAGGGGTTCTCATA

Product: peptidase C26

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 230

Protein sequence:

>231_residues
MAVIGITSGQQKNGTECRIPKTYVKAIVRAGGVPLVLPVLTNKDILKKYIELIDGLLLTGGGDPDPRYFYEEPRPGLGEV
DPQRDEFEILITGLALNTGLPLLGICRGCQLINIVEGGTLYQDLEKEYPNPLKHNQSSPGKYPFHTVHVKKESWLYSISK
MTNFRVNSVHHQAIKEVAPGYKATALAEDGVIEAIEKSGDGFVFGVQWHPEQMVNDSVSLKIFTEFVNRVD

Sequences:

>Translated_231_residues
MAVIGITSGQQKNGTECRIPKTYVKAIVRAGGVPLVLPVLTNKDILKKYIELIDGLLLTGGGDPDPRYFYEEPRPGLGEV
DPQRDEFEILITGLALNTGLPLLGICRGCQLINIVEGGTLYQDLEKEYPNPLKHNQSSPGKYPFHTVHVKKESWLYSISK
MTNFRVNSVHHQAIKEVAPGYKATALAEDGVIEAIEKSGDGFVFGVQWHPEQMVNDSVSLKIFTEFVNRVD
>Mature_230_residues
AVIGITSGQQKNGTECRIPKTYVKAIVRAGGVPLVLPVLTNKDILKKYIELIDGLLLTGGGDPDPRYFYEEPRPGLGEVD
PQRDEFEILITGLALNTGLPLLGICRGCQLINIVEGGTLYQDLEKEYPNPLKHNQSSPGKYPFHTVHVKKESWLYSISKM
TNFRVNSVHHQAIKEVAPGYKATALAEDGVIEAIEKSGDGFVFGVQWHPEQMVNDSVSLKIFTEFVNRVD

Specific function: Unknown

COG id: COG2071

COG function: function code R; Predicted glutamine amidotransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081871, Length=219, Percent_Identity=32.4200913242009, Blast_Score=106, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017926
- InterPro:   IPR011697 [H]

Pfam domain/function: PF07722 Peptidase_C26 [H]

EC number: NA

Molecular weight: Translated: 25578; Mature: 25446

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVIGITSGQQKNGTECRIPKTYVKAIVRAGGVPLVLPVLTNKDILKKYIELIDGLLLTG
CEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCEEEEC
GGDPDPRYFYEEPRPGLGEVDPQRDEFEILITGLALNTGLPLLGICRGCQLINIVEGGTL
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEHHCCCCCHHHHHCCCEEEEEECCCHH
YQDLEKEYPNPLKHNQSSPGKYPFHTVHVKKESWLYSISKMTNFRVNSVHHQAIKEVAPG
HHHHHHHCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
YKATALAEDGVIEAIEKSGDGFVFGVQWHPEQMVNDSVSLKIFTEFVNRVD
CCEEEECCCCHHHHHHCCCCEEEEEEEECHHHHHCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
AVIGITSGQQKNGTECRIPKTYVKAIVRAGGVPLVLPVLTNKDILKKYIELIDGLLLTG
EEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCEEEEC
GGDPDPRYFYEEPRPGLGEVDPQRDEFEILITGLALNTGLPLLGICRGCQLINIVEGGTL
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEHHCCCCCHHHHHCCCEEEEEECCCHH
YQDLEKEYPNPLKHNQSSPGKYPFHTVHVKKESWLYSISKMTNFRVNSVHHQAIKEVAPG
HHHHHHHCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
YKATALAEDGVIEAIEKSGDGFVFGVQWHPEQMVNDSVSLKIFTEFVNRVD
CCEEEECCCCHHHHHHCCCCEEEEEEEECHHHHHCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]