| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220933022
Identifier: 220933022
GI number: 220933022
Start: 2380519
End: 2381742
Strand: Reverse
Name: 220933022
Synonym: Hore_21890
Alternate gene names: NA
Gene position: 2381742-2380519 (Counterclockwise)
Preceding gene: 220933023
Following gene: 220933021
Centisome position: 92.38
GC content: 40.2
Gene sequence:
>1224_bases ATGAAACGTTTTGCCATCTGGTTCCTTGTTTTAGTTGTACTGGCAGCTGCAGTAAGTGCTGTTCATAAAATATATGATTT AAGGTATCTTTATCGGATATATATTAAGAGAGAATTTGCGATAAACCCTAAAGCAGAAATCAGGCCTGATAGAGTGTATA AGGTCAGGATCTGGTATTATCCCTATAAACGGGTAATCACAAAGGAAGGTAAGGATGAAAAAGAGTTTTTTAAAGAGGTA GCTAAAGAGGTGGAGAGGAAATACCCCAATATACAACTAAAAATTGGCAGACTTGATTTCAGGAAGGGGCGGGCTACCCT CGATAGGGCACTCAAAGCAGGTGATCCCCCCGATATTTATTTTAATTTTAGTAACCAGCCATATATAACAAAAAAGTTAC AGGTGCCGGCCCATTTATATCTGACCCGGGAGGATTATGAACTTCTACCCCCTTTTATGGAGGAAGGCAGGCTATGGGGT TTTCCCTTCCTGATTGAGAGACAGGTCTGGCTGGCCAGAAACAACTTACCCGGTCTGGCAGAACCGGTCCTGACAATTAA TAGGTTTGATGATTTGAAAGATGATAGCTTAATATTAAACTATTATGATCCCACCCTTTTATTACAATTATTATCACTCT ATGGTATTAGTGATATTGAATATAACGGAAAGACCCTCGACAATAAAACCCTGGAGGCCCTGAGAGCTGTTTTTAAACTG GCCCATAATTTAAGGCAGGCAAAGATATACGGGAAAGCAGGTCAGGTTGATATCACAATGTTGAAGAGTTTTTTTCAAGG TAAAACTGTCCTGCTGGGCCCGGTTAATCCCTGGCTAAAAGAAGTATTGTCCAATAGATTAAGTGATTCCATTGTGGAAG TTAAGCTTGATAACCTGGTCAGGGTTTATACTCTGACCATATTTAGACAGGAACCTTATCGGGGGGATGATCATACTAAA GCAGCAGTAGAGGTGGCGAGAATCATTGCTCAGAAAAAGGCTTACATAATGGCCAGTGATTTAGGCCTTATCCCGGCCTT CAGAATGAAAAAGGAAGTAGAGCAATCAGGGGATATTTCTATAGACAGGTATAAACCTGTCATAACTTTAACCCCTGAGG AAAGGGATTACTGGTATAAAAACATTATTCCACTCTGGGTACAGTTCTGGGAAGACAACTTAAGCCCTGAAGAAGCCCTG GCTACTATAATAAAAAATAATTAA
Upstream 100 bases:
>100_bases TAAAGAACTCGAGTCCCAGTTTGGGTTGAAGGTAGATGGTATAGCTGACTGGAGTGTCCTCTATATCTTGAATCTTCCTG ATGATTGAGGGGGTGTTGGT
Downstream 100 bases:
>100_bases GGGAAAATATCAGGTTTTTATCCCGGTTATTGAAGTAATTAAAAAGTTTTTTAAAAAAGCTTAAGCAGCAATTAAAAAAA TTAAGGAGCAGGTGAAATTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 407; Mature: 407
Protein sequence:
>407_residues MKRFAIWFLVLVVLAAAVSAVHKIYDLRYLYRIYIKREFAINPKAEIRPDRVYKVRIWYYPYKRVITKEGKDEKEFFKEV AKEVERKYPNIQLKIGRLDFRKGRATLDRALKAGDPPDIYFNFSNQPYITKKLQVPAHLYLTREDYELLPPFMEEGRLWG FPFLIERQVWLARNNLPGLAEPVLTINRFDDLKDDSLILNYYDPTLLLQLLSLYGISDIEYNGKTLDNKTLEALRAVFKL AHNLRQAKIYGKAGQVDITMLKSFFQGKTVLLGPVNPWLKEVLSNRLSDSIVEVKLDNLVRVYTLTIFRQEPYRGDDHTK AAVEVARIIAQKKAYIMASDLGLIPAFRMKKEVEQSGDISIDRYKPVITLTPEERDYWYKNIIPLWVQFWEDNLSPEEAL ATIIKNN
Sequences:
>Translated_407_residues MKRFAIWFLVLVVLAAAVSAVHKIYDLRYLYRIYIKREFAINPKAEIRPDRVYKVRIWYYPYKRVITKEGKDEKEFFKEV AKEVERKYPNIQLKIGRLDFRKGRATLDRALKAGDPPDIYFNFSNQPYITKKLQVPAHLYLTREDYELLPPFMEEGRLWG FPFLIERQVWLARNNLPGLAEPVLTINRFDDLKDDSLILNYYDPTLLLQLLSLYGISDIEYNGKTLDNKTLEALRAVFKL AHNLRQAKIYGKAGQVDITMLKSFFQGKTVLLGPVNPWLKEVLSNRLSDSIVEVKLDNLVRVYTLTIFRQEPYRGDDHTK AAVEVARIIAQKKAYIMASDLGLIPAFRMKKEVEQSGDISIDRYKPVITLTPEERDYWYKNIIPLWVQFWEDNLSPEEAL ATIIKNN >Mature_407_residues MKRFAIWFLVLVVLAAAVSAVHKIYDLRYLYRIYIKREFAINPKAEIRPDRVYKVRIWYYPYKRVITKEGKDEKEFFKEV AKEVERKYPNIQLKIGRLDFRKGRATLDRALKAGDPPDIYFNFSNQPYITKKLQVPAHLYLTREDYELLPPFMEEGRLWG FPFLIERQVWLARNNLPGLAEPVLTINRFDDLKDDSLILNYYDPTLLLQLLSLYGISDIEYNGKTLDNKTLEALRAVFKL AHNLRQAKIYGKAGQVDITMLKSFFQGKTVLLGPVNPWLKEVLSNRLSDSIVEVKLDNLVRVYTLTIFRQEPYRGDDHTK AAVEVARIIAQKKAYIMASDLGLIPAFRMKKEVEQSGDISIDRYKPVITLTPEERDYWYKNIIPLWVQFWEDNLSPEEAL ATIIKNN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47724; Mature: 47724
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRFAIWFLVLVVLAAAVSAVHKIYDLRYLYRIYIKREFAINPKAEIRPDRVYKVRIWYY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCEEEEEEEEEE PYKRVITKEGKDEKEFFKEVAKEVERKYPNIQLKIGRLDFRKGRATLDRALKAGDPPDIY CHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECEECCCCHHHHHHHHHCCCCCCEE FNFSNQPYITKKLQVPAHLYLTREDYELLPPFMEEGRLWGFPFLIERQVWLARNNLPGLA EECCCCCEEEEEEECCEEEEEECCCCHHCCCHHHCCCCCCCCHHHHHHHHHHCCCCCCCH EPVLTINRFDDLKDDSLILNYYDPTLLLQLLSLYGISDIEYNGKTLDNKTLEALRAVFKL HHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH AHNLRQAKIYGKAGQVDITMLKSFFQGKTVLLGPVNPWLKEVLSNRLSDSIVEVKLDNLV HHHHHHHHEECCCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHEEEEHHHCEE RVYTLTIFRQEPYRGDDHTKAAVEVARIIAQKKAYIMASDLGLIPAFRMKKEVEQSGDIS EEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHCCCEE IDRYKPVITLTPEERDYWYKNIIPLWVQFWEDNLSPEEALATIIKNN EECCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC >Mature Secondary Structure MKRFAIWFLVLVVLAAAVSAVHKIYDLRYLYRIYIKREFAINPKAEIRPDRVYKVRIWYY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCEEEEEEEEEE PYKRVITKEGKDEKEFFKEVAKEVERKYPNIQLKIGRLDFRKGRATLDRALKAGDPPDIY CHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECEECCCCHHHHHHHHHCCCCCCEE FNFSNQPYITKKLQVPAHLYLTREDYELLPPFMEEGRLWGFPFLIERQVWLARNNLPGLA EECCCCCEEEEEEECCEEEEEECCCCHHCCCHHHCCCCCCCCHHHHHHHHHHCCCCCCCH EPVLTINRFDDLKDDSLILNYYDPTLLLQLLSLYGISDIEYNGKTLDNKTLEALRAVFKL HHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH AHNLRQAKIYGKAGQVDITMLKSFFQGKTVLLGPVNPWLKEVLSNRLSDSIVEVKLDNLV HHHHHHHHEECCCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHEEEEHHHCEE RVYTLTIFRQEPYRGDDHTKAAVEVARIIAQKKAYIMASDLGLIPAFRMKKEVEQSGDIS EEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHCCCEE IDRYKPVITLTPEERDYWYKNIIPLWVQFWEDNLSPEEALATIIKNN EECCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA