| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220933019
Identifier: 220933019
GI number: 220933019
Start: 2377649
End: 2378377
Strand: Reverse
Name: 220933019
Synonym: Hore_21860
Alternate gene names: NA
Gene position: 2378377-2377649 (Counterclockwise)
Preceding gene: 220933020
Following gene: 220933018
Centisome position: 92.25
GC content: 38.27
Gene sequence:
>729_bases ATGGTTACAAGGAAAATTGTTCACATTGATGAGGAAAAATGTAACGGCTGTGGTTTATGTATTCCTGCCTGTCATGAAGG CGCCATTCAGTTAGTTAATGGTAAAGCCAAACTGGTTGATGATAAATATTGTGATGGTCTTGGGGATTGTATTGGAGAGT GTCCTCAGGGTGCGATAAAGATTATTGAAAGAGAGGCCAGAGAGTACGATAAAGAAGCTGTACAGGAACGTTTAAATAAT CTTGAATCGAGTAATATGAAGGTAAAAGGAGGTTGTCCTGGGGCCAGTATGAGGGATTTAAGTCAAAGTGATAATAATAA CTCAAGTATCACTTCAAATGACATTGAACTTAAGATTAAATCCCAGTTAAAAAACTGGCCAGTCCAGTTAATGCTGGTTC CAGATAAGGCACCATATTTTAATAATGCTGATTTGCTGGTAACAGCTGACTGTGTACCCTTTGCCTATCCGAATTTTCAC CTTGACCTATTGAAAAACCGGACAGCTGTGATAGGTTGTCCCAAGCTGGATAATACCGGATACTATGTAGAGAAGCTGAC TTCCATTATAAAGGAAAATGATATTAACAGCGTTACTGTTGCTGTTATGGAAGTACCCTGTTGTAATGGATTGATTCAGG CAGTTCAGAAAGCAGTTCAGGATAGTGGGAAAAAACTTGATTTTGAACAAGTAATAATAACTATTGACGGCAATAAACGG CAAAGATAA
Upstream 100 bases:
>100_bases AGACCAGTGTTTATTTTTAGTTTATAATTGTTATGCAGGGTTTATAGTAGTCAACTAAATAGGAAAAAGGAATCAGGAAA ATTAAGCGGAGGTGGTTTTA
Downstream 100 bases:
>100_bases TAATAGTAAATAATGCCCGGAATCCCCCGGGCCTTATTTTTTATCTGGTTATGGCAGGAATTCTACATACTTCACAAAAA AGATTATTTTTGGTATAATA
Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MVTRKIVHIDEEKCNGCGLCIPACHEGAIQLVNGKAKLVDDKYCDGLGDCIGECPQGAIKIIEREAREYDKEAVQERLNN LESSNMKVKGGCPGASMRDLSQSDNNNSSITSNDIELKIKSQLKNWPVQLMLVPDKAPYFNNADLLVTADCVPFAYPNFH LDLLKNRTAVIGCPKLDNTGYYVEKLTSIIKENDINSVTVAVMEVPCCNGLIQAVQKAVQDSGKKLDFEQVIITIDGNKR QR
Sequences:
>Translated_242_residues MVTRKIVHIDEEKCNGCGLCIPACHEGAIQLVNGKAKLVDDKYCDGLGDCIGECPQGAIKIIEREAREYDKEAVQERLNN LESSNMKVKGGCPGASMRDLSQSDNNNSSITSNDIELKIKSQLKNWPVQLMLVPDKAPYFNNADLLVTADCVPFAYPNFH LDLLKNRTAVIGCPKLDNTGYYVEKLTSIIKENDINSVTVAVMEVPCCNGLIQAVQKAVQDSGKKLDFEQVIITIDGNKR QR >Mature_242_residues MVTRKIVHIDEEKCNGCGLCIPACHEGAIQLVNGKAKLVDDKYCDGLGDCIGECPQGAIKIIEREAREYDKEAVQERLNN LESSNMKVKGGCPGASMRDLSQSDNNNSSITSNDIELKIKSQLKNWPVQLMLVPDKAPYFNNADLLVTADCVPFAYPNFH LDLLKNRTAVIGCPKLDNTGYYVEKLTSIIKENDINSVTVAVMEVPCCNGLIQAVQKAVQDSGKKLDFEQVIITIDGNKR QR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26705; Mature: 26705
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 5.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTRKIVHIDEEKCNGCGLCIPACHEGAIQLVNGKAKLVDDKYCDGLGDCIGECPQGAIK CCCCEEEEECCCCCCCCCEEEECCCCCCEEEECCCEEECCCHHHCHHHHHHHHCCHHHHH IIEREAREYDKEAVQERLNNLESSNMKVKGGCPGASMRDLSQSDNNNSSITSNDIELKIK HHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHCCCCCCCCEECCCEEEEEH SQLKNWPVQLMLVPDKAPYFNNADLLVTADCVPFAYPNFHLDLLKNRTAVIGCPKLDNTG HHHCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCCEEEHHHCCCEEEEECCCCCCCC YYVEKLTSIIKENDINSVTVAVMEVPCCNGLIQAVQKAVQDSGKKLDFEQVIITIDGNKR HHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCC QR CC >Mature Secondary Structure MVTRKIVHIDEEKCNGCGLCIPACHEGAIQLVNGKAKLVDDKYCDGLGDCIGECPQGAIK CCCCEEEEECCCCCCCCCEEEECCCCCCEEEECCCEEECCCHHHCHHHHHHHHCCHHHHH IIEREAREYDKEAVQERLNNLESSNMKVKGGCPGASMRDLSQSDNNNSSITSNDIELKIK HHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHCCCCCCCCEECCCEEEEEH SQLKNWPVQLMLVPDKAPYFNNADLLVTADCVPFAYPNFHLDLLKNRTAVIGCPKLDNTG HHHCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCCEEEHHHCCCEEEEECCCCCCCC YYVEKLTSIIKENDINSVTVAVMEVPCCNGLIQAVQKAVQDSGKKLDFEQVIITIDGNKR HHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCC QR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]