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The map label for this gene is xpsE [H]

Identifier: 220932706

GI number: 220932706

Start: 1997576

End: 1999120

Strand: Reverse

Name: xpsE [H]

Synonym: Hore_18700

Alternate gene names: 220932706

Gene position: 1999120-1997576 (Counterclockwise)

Preceding gene: 220932707

Following gene: 220932705

Centisome position: 77.54

GC content: 41.29

Gene sequence:

>1545_bases
ATGGATAAGACAAACATGGATTACGAAAATATTAATAGTCTAGAGGTCAGTGAGATAAATAATTTTTATATAGACAATAA
GTTAATCAGAAATTTCCCTGGCTCAACTTTAAAAGAAAACAGGCTAATTCCCCTGACCAGACATGGTGACACTGTAGTAG
TTATTTCCGATAATTACCCTCCCCCTGAGGCAATCAATGACCTGGAAGTATATACAGGGTTTAAAATAGATGTCAGGTTA
GAAAAATCTCATGTGGTTCAACAGCTTGTAAATGAACACCTTAAGGCTCCGGTGGATACAGTAGAAGATATGCTTGATGA
TAATAATTTGCGGGGTCTGGATGATTTCAAGATCCTAAAAATTGATAGCCGGGTTGAAAACCTGGAGGATTTAGCCCAGG
AAGCCCCAATAATCAGACTGGTTAATGCCATCATCACTACTGCCTTGAAGAAGGGAGCAAGTGATATCCATATTGAACCC
TTTGAAGACAAATTAAGGTTAAGGTACAGAATAGACGGTGTTTTATATGAGAATCCTGCCCCGCCACTGGAGTTGTTACC
GGCTATCATTACCAGGATAAAAATTATGTCTGAATTAAATATTGCTGAAAGACGGCTTCCTCAGGAAGGTAGAATCAGAA
TCAGGGTATCGGGTCGGGAGCTTGATATAAGGGTGTCTATTATTCCTGCTCTCCATGGGGAAGGAGTTGTCCTCAGGTTA
CTTGATAAAGCAGCCCGGTTACTTGATATCAAAAACCTCGGCTTTAGCGAGGCTATGTTAAAAAGGTATTTGAACCTTAT
TAATATTCCTCATGGCATTATTCTGGTGACAGGTCCGACCGGAAGTGGTAAGACAACAACCCTTTATGCAACCTTACAGT
ATTTGAATTCATCAAGTCGAAAGATAATTACCATTGAAGACCCGGTTGAATACCAGTTAGAGGGAATTAACCAGATACAG
GTAAAACCGGAGATTAACTTCGATTTTGCCTCTGGTCTACGATCTATTTTGCGACATGATCCCGATATTATTATGATAGG
TGAAATCAGAGATGTGGAAACAGCTAAAATTGCCATTCAGGCAGCCCTGACAGGCCATCTGGTCCTGGCAACTCTCCATA
CCAATGATGCTGCCGGTGCTGTCTCGAGATTACTTAATATGGGGGTTGAAGATTACCTGCTGGCAGCAACCCTGAAAGGG
ATACTGGCCCAACGTCTTGTCAGGGTTTTATGCCCCAGGTGTAAGGAGTCCTATCAACCTACATCTTCAGAAGTTAACCT
GATTGATGATGATGTAGAGTTATTATACCGTCCGGCGGGTTGTACCTTCTGTAATAATATAGGTTTTAAGGGGCGGACGG
GTATTTATGAATTATTAACTGTAACCCCCCAGATTGAATCAATGATTGTCCAGAGGGCCAGCTCAAGTGAGATTAAAGAA
GAGCTTAAAAAAACAGGTTATACCAGTCTGTTCACCGACGGTTGTATCAAGGTAAAAGACGGTTTAACTTCCATAGATGA
AGTGGTCAGGGTTACAACCCAGTAA

Upstream 100 bases:

>100_bases
AAGTTAAGTTAAATTTTGACCGGAAAGACTGGTAAATATATAATTAATTTCTTTTTGGTCTAATATTGTAATGATTAATT
AATATTGTGGTGATTAGAAA

Downstream 100 bases:

>100_bases
TGATTGAAGGCAGGTTAAGGTAGGTGGTCAGTATGGCTGAATTTATATATGAAGCGTTGACGGAAAATGGAGAAGTTACC
ACCGGGAGTATTAAAGCCCG

Product: type II secretion system protein E

Products: NA

Alternate protein names: Type II traffic warden ATPase [H]

Number of amino acids: Translated: 514; Mature: 514

Protein sequence:

>514_residues
MDKTNMDYENINSLEVSEINNFYIDNKLIRNFPGSTLKENRLIPLTRHGDTVVVISDNYPPPEAINDLEVYTGFKIDVRL
EKSHVVQQLVNEHLKAPVDTVEDMLDDNNLRGLDDFKILKIDSRVENLEDLAQEAPIIRLVNAIITTALKKGASDIHIEP
FEDKLRLRYRIDGVLYENPAPPLELLPAIITRIKIMSELNIAERRLPQEGRIRIRVSGRELDIRVSIIPALHGEGVVLRL
LDKAARLLDIKNLGFSEAMLKRYLNLINIPHGIILVTGPTGSGKTTTLYATLQYLNSSSRKIITIEDPVEYQLEGINQIQ
VKPEINFDFASGLRSILRHDPDIIMIGEIRDVETAKIAIQAALTGHLVLATLHTNDAAGAVSRLLNMGVEDYLLAATLKG
ILAQRLVRVLCPRCKESYQPTSSEVNLIDDDVELLYRPAGCTFCNNIGFKGRTGIYELLTVTPQIESMIVQRASSSEIKE
ELKKTGYTSLFTDGCIKVKDGLTSIDEVVRVTTQ

Sequences:

>Translated_514_residues
MDKTNMDYENINSLEVSEINNFYIDNKLIRNFPGSTLKENRLIPLTRHGDTVVVISDNYPPPEAINDLEVYTGFKIDVRL
EKSHVVQQLVNEHLKAPVDTVEDMLDDNNLRGLDDFKILKIDSRVENLEDLAQEAPIIRLVNAIITTALKKGASDIHIEP
FEDKLRLRYRIDGVLYENPAPPLELLPAIITRIKIMSELNIAERRLPQEGRIRIRVSGRELDIRVSIIPALHGEGVVLRL
LDKAARLLDIKNLGFSEAMLKRYLNLINIPHGIILVTGPTGSGKTTTLYATLQYLNSSSRKIITIEDPVEYQLEGINQIQ
VKPEINFDFASGLRSILRHDPDIIMIGEIRDVETAKIAIQAALTGHLVLATLHTNDAAGAVSRLLNMGVEDYLLAATLKG
ILAQRLVRVLCPRCKESYQPTSSEVNLIDDDVELLYRPAGCTFCNNIGFKGRTGIYELLTVTPQIESMIVQRASSSEIKE
ELKKTGYTSLFTDGCIKVKDGLTSIDEVVRVTTQ
>Mature_514_residues
MDKTNMDYENINSLEVSEINNFYIDNKLIRNFPGSTLKENRLIPLTRHGDTVVVISDNYPPPEAINDLEVYTGFKIDVRL
EKSHVVQQLVNEHLKAPVDTVEDMLDDNNLRGLDDFKILKIDSRVENLEDLAQEAPIIRLVNAIITTALKKGASDIHIEP
FEDKLRLRYRIDGVLYENPAPPLELLPAIITRIKIMSELNIAERRLPQEGRIRIRVSGRELDIRVSIIPALHGEGVVLRL
LDKAARLLDIKNLGFSEAMLKRYLNLINIPHGIILVTGPTGSGKTTTLYATLQYLNSSSRKIITIEDPVEYQLEGINQIQ
VKPEINFDFASGLRSILRHDPDIIMIGEIRDVETAKIAIQAALTGHLVLATLHTNDAAGAVSRLLNMGVEDYLLAATLKG
ILAQRLVRVLCPRCKESYQPTSSEVNLIDDDVELLYRPAGCTFCNNIGFKGRTGIYELLTVTPQIESMIVQRASSSEIKE
ELKKTGYTSLFTDGCIKVKDGLTSIDEVVRVTTQ

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]

COG id: COG2804

COG function: function code NU; Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

Organism=Escherichia coli, GI1789723, Length=392, Percent_Identity=51.0204081632653, Blast_Score=400, Evalue=1e-112,
Organism=Escherichia coli, GI1786296, Length=377, Percent_Identity=42.7055702917772, Blast_Score=322, Evalue=5e-89,
Organism=Escherichia coli, GI87082188, Length=277, Percent_Identity=36.101083032491, Blast_Score=131, Evalue=9e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR007831
- InterPro:   IPR013369
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E; PF05157 GSPII_E_N [H]

EC number: NA

Molecular weight: Translated: 57553; Mature: 57553

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: PS00662 T2SP_E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKTNMDYENINSLEVSEINNFYIDNKLIRNFPGSTLKENRLIPLTRHGDTVVVISDNYP
CCCCCCCHHCCCCEEHHHCCCEEECCHHHHCCCCCCCCCCCEEEEEECCCEEEEEECCCC
PPEAINDLEVYTGFKIDVRLEKSHVVQQLVNEHLKAPVDTVEDMLDDNNLRGLDDFKILK
CCCCCCCCEEEECEEEEEEECHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCEEEEE
IDSRVENLEDLAQEAPIIRLVNAIITTALKKGASDIHIEPFEDKLRLRYRIDGVLYENPA
ECHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEECCCHHCEEEEEEEEEEEECCCC
PPLELLPAIITRIKIMSELNIAERRLPQEGRIRIRVSGRELDIRVSIIPALHGEGVVLRL
CCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCEEEEEECCEEEEEEEEEEEECCCCHHHHH
LDKAARLLDIKNLGFSEAMLKRYLNLINIPHGIILVTGPTGSGKTTTLYATLQYLNSSSR
HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEEEEHHHCCCCC
KIITIEDPVEYQLEGINQIQVKPEINFDFASGLRSILRHDPDIIMIGEIRDVETAKIAIQ
EEEEECCCCHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHEEEE
AALTGHLVLATLHTNDAAGAVSRLLNMGVEDYLLAATLKGILAQRLVRVLCPRCKESYQP
EEECCEEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCC
TSSEVNLIDDDVELLYRPAGCTFCNNIGFKGRTGIYELLTVTPQIESMIVQRASSSEIKE
CCCCCEEECCCHHHEEECCCCCHHCCCCCCCCCCCEEEEECCHHHHHHHHHCCCHHHHHH
ELKKTGYTSLFTDGCIKVKDGLTSIDEVVRVTTQ
HHHHCCCCEECCCCCEEECCCCHHHHHHHHCCCC
>Mature Secondary Structure
MDKTNMDYENINSLEVSEINNFYIDNKLIRNFPGSTLKENRLIPLTRHGDTVVVISDNYP
CCCCCCCHHCCCCEEHHHCCCEEECCHHHHCCCCCCCCCCCEEEEEECCCEEEEEECCCC
PPEAINDLEVYTGFKIDVRLEKSHVVQQLVNEHLKAPVDTVEDMLDDNNLRGLDDFKILK
CCCCCCCCEEEECEEEEEEECHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCEEEEE
IDSRVENLEDLAQEAPIIRLVNAIITTALKKGASDIHIEPFEDKLRLRYRIDGVLYENPA
ECHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEECCCHHCEEEEEEEEEEEECCCC
PPLELLPAIITRIKIMSELNIAERRLPQEGRIRIRVSGRELDIRVSIIPALHGEGVVLRL
CCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCEEEEEECCEEEEEEEEEEEECCCCHHHHH
LDKAARLLDIKNLGFSEAMLKRYLNLINIPHGIILVTGPTGSGKTTTLYATLQYLNSSSR
HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEEEEHHHCCCCC
KIITIEDPVEYQLEGINQIQVKPEINFDFASGLRSILRHDPDIIMIGEIRDVETAKIAIQ
EEEEECCCCHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHEEEE
AALTGHLVLATLHTNDAAGAVSRLLNMGVEDYLLAATLKGILAQRLVRVLCPRCKESYQP
EEECCEEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCC
TSSEVNLIDDDVELLYRPAGCTFCNNIGFKGRTGIYELLTVTPQIESMIVQRASSSEIKE
CCCCCEEECCCHHHEEECCCCCHHCCCCCCCCCCCEEEEECCHHHHHHHHHCCCHHHHHH
ELKKTGYTSLFTDGCIKVKDGLTSIDEVVRVTTQ
HHHHCCCCEECCCCCEEECCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1944223; 12024217 [H]