| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220932707
Identifier: 220932707
GI number: 220932707
Start: 1999186
End: 1999818
Strand: Reverse
Name: 220932707
Synonym: Hore_18710
Alternate gene names: NA
Gene position: 1999818-1999186 (Counterclockwise)
Preceding gene: 220932708
Following gene: 220932706
Centisome position: 77.57
GC content: 31.91
Gene sequence:
>633_bases TTGACTAAAAAGTCTTTAAACTATATTTATATTTTATTAATACTTGTATTGCTTGGTAGCATTTTTAATTTATGGATGGT GACAACAAAAGATAAGAAGGTTTCCGGGGAAGTCTTTTTGCAGGAGAATAATTTAAAGGAAATTAAATTGTCTAAAAAAA ATCTTCAGAGGGCCGGGGTTACTGATTTAAAAACCAGGCCTGATAATTCTATTAACGATAAAACTTCAAAACATGACCGG AGTATTAATTATACGAAACAAACTTTTACAAAACCGAATGTGAGTAAATTGACCTGGGTTGAAGACTTAAATAATTTATT TCCGGTAAAAAAGGGGCTTGACAAGGAAGAAAAAAAAGAACCTGTTTCAAAACAGGTCATAAAACAGGTTGAAAATATCA AAGCAGATGGTGAAAAGGATAAAAGTATTAAACATTCTTTAATTCTCCTGGCAATTCTGAAAGGTGGGGTTAACAGGGCT ATCGTTCTGGATGAGGCCTCAGGTAAAACCTTTATAGTCTCTGAGGGGGATATATTTAATAAATATAAAGTATTAACAAT TAAAGATAATGGGGTTATTTGTTCGGTTAACGAGAAGAAAGTTAAGTTAAATTTTGACCGGAAAGACTGGTAA
Upstream 100 bases:
>100_bases GACAGGGATAATAAAGGTTATAAAATTCGTATCTTAAGATGGTATGAAAATGTTAGTTACAGGCAGGTTAGATCACAATA AAGTGTAGAGGTGCTTTATA
Downstream 100 bases:
>100_bases ATATATAATTAATTTCTTTTTGGTCTAATATTGTAATGATTAATTAATATTGTGGTGATTAGAAAATGGATAAGACAAAC ATGGATTACGAAAATATTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 210; Mature: 209
Protein sequence:
>210_residues MTKKSLNYIYILLILVLLGSIFNLWMVTTKDKKVSGEVFLQENNLKEIKLSKKNLQRAGVTDLKTRPDNSINDKTSKHDR SINYTKQTFTKPNVSKLTWVEDLNNLFPVKKGLDKEEKKEPVSKQVIKQVENIKADGEKDKSIKHSLILLAILKGGVNRA IVLDEASGKTFIVSEGDIFNKYKVLTIKDNGVICSVNEKKVKLNFDRKDW
Sequences:
>Translated_210_residues MTKKSLNYIYILLILVLLGSIFNLWMVTTKDKKVSGEVFLQENNLKEIKLSKKNLQRAGVTDLKTRPDNSINDKTSKHDR SINYTKQTFTKPNVSKLTWVEDLNNLFPVKKGLDKEEKKEPVSKQVIKQVENIKADGEKDKSIKHSLILLAILKGGVNRA IVLDEASGKTFIVSEGDIFNKYKVLTIKDNGVICSVNEKKVKLNFDRKDW >Mature_209_residues TKKSLNYIYILLILVLLGSIFNLWMVTTKDKKVSGEVFLQENNLKEIKLSKKNLQRAGVTDLKTRPDNSINDKTSKHDRS INYTKQTFTKPNVSKLTWVEDLNNLFPVKKGLDKEEKKEPVSKQVIKQVENIKADGEKDKSIKHSLILLAILKGGVNRAI VLDEASGKTFIVSEGDIFNKYKVLTIKDNGVICSVNEKKVKLNFDRKDW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23965; Mature: 23834
Theoretical pI: Translated: 10.37; Mature: 10.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKKSLNYIYILLILVLLGSIFNLWMVTTKDKKVSGEVFLQENNLKEIKLSKKNLQRAGV CCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCEEEEECCCCCEEEECHHHHHHCCC TDLKTRPDNSINDKTSKHDRSINYTKQTFTKPNVSKLTWVEDLNNLFPVKKGLDKEEKKE CCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHCCHHHCCCHHHHHC PVSKQVIKQVENIKADGEKDKSIKHSLILLAILKGGVNRAIVLDEASGKTFIVSEGDIFN HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEECCCCCC KYKVLTIKDNGVICSVNEKKVKLNFDRKDW EEEEEEEECCCEEEEECCCEEEEECCCCCC >Mature Secondary Structure TKKSLNYIYILLILVLLGSIFNLWMVTTKDKKVSGEVFLQENNLKEIKLSKKNLQRAGV CCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCEEEEECCCCCEEEECHHHHHHCCC TDLKTRPDNSINDKTSKHDRSINYTKQTFTKPNVSKLTWVEDLNNLFPVKKGLDKEEKKE CCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHCCHHHCCCHHHHHC PVSKQVIKQVENIKADGEKDKSIKHSLILLAILKGGVNRAIVLDEASGKTFIVSEGDIFN HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEECCCCCC KYKVLTIKDNGVICSVNEKKVKLNFDRKDW EEEEEEEECCCEEEEECCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA