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The map label for this gene is atpH

Identifier: 220932619

GI number: 220932619

Start: 1911672

End: 1912247

Strand: Reverse

Name: atpH

Synonym: Hore_17830

Alternate gene names: 220932619

Gene position: 1912247-1911672 (Counterclockwise)

Preceding gene: 220932620

Following gene: 220932618

Centisome position: 74.17

GC content: 35.07

Gene sequence:

>576_bases
ATGATTAATAATGAGGTTTCCAGAAAGTATAGTAGTGCTCTATTAGAAGTTGCCCTGGAGAGTGATAATCTTTCCAGATT
TAAAGAGGAACTTGAGGGGATTAGTAAGGCTTTGAAGCAGTATGATGATTTAAAAAAAATTCTCTATCATCCCCGGGTTT
TGCCAGATGATAAAAAAGAGGTAATTCACCAGGTTTTTTCTGATAAGGTTTCTGAACCGGTTTTTAATTTTTTAAACCTT
ATAGTTGATAAAAGGCGAGAGGTTTACCTTGATTTTATCATCAGGGATTTTATTAAACAGGCCAACAGGAAAGAAGGGCT
GGTAAAGATAGAGGTTGTTTCAGCTATTGAGCTTTCTGAAAAGCAGAGAGAGCAGCTGAAAAACAAACTTAAAAAAGCTC
TGAACAAAAAGATTGAATTAAAGACGAAAATTGACCCCGGTATCATTGGTGGGATTATTATTAAAATCGGTGACAGGTTA
ATAGATGGAAGTATTAAACACCAGCTTGATTCCATAAAAGAGAGCATTGAAAAAATTCCAGTAACAGAGTTAGGGGTGAT
TCAGAATGAATCTTAG

Upstream 100 bases:

>100_bases
CCGGTAAGTTCATTAAAGAAAAAATAGATAAAAAACAGCAGGAAGCCTTGATAAATCAATATATTGAGAACCTGGATCAG
GAGAAGATAGGTGAACTGCA

Downstream 100 bases:

>100_bases
ACCTGAAGAAATAAGTTCTGTAATTAAAAAACAGATTGAAAATTATAAATCAGAACTGGAGACCGTCAGTGTCGGTACCG
TACTGGATGTGGGTGATGGT

Product: ATP synthase F1 subunit delta

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(1) sector subunit delta; F-type ATPase subunit delta; F-ATPase subunit delta

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MINNEVSRKYSSALLEVALESDNLSRFKEELEGISKALKQYDDLKKILYHPRVLPDDKKEVIHQVFSDKVSEPVFNFLNL
IVDKRREVYLDFIIRDFIKQANRKEGLVKIEVVSAIELSEKQREQLKNKLKKALNKKIELKTKIDPGIIGGIIIKIGDRL
IDGSIKHQLDSIKESIEKIPVTELGVIQNES

Sequences:

>Translated_191_residues
MINNEVSRKYSSALLEVALESDNLSRFKEELEGISKALKQYDDLKKILYHPRVLPDDKKEVIHQVFSDKVSEPVFNFLNL
IVDKRREVYLDFIIRDFIKQANRKEGLVKIEVVSAIELSEKQREQLKNKLKKALNKKIELKTKIDPGIIGGIIIKIGDRL
IDGSIKHQLDSIKESIEKIPVTELGVIQNES
>Mature_191_residues
MINNEVSRKYSSALLEVALESDNLSRFKEELEGISKALKQYDDLKKILYHPRVLPDDKKEVIHQVFSDKVSEPVFNFLNL
IVDKRREVYLDFIIRDFIKQANRKEGLVKIEVVSAIELSEKQREQLKNKLKKALNKKIELKTKIDPGIIGGIIIKIGDRL
IDGSIKHQLDSIKESIEKIPVTELGVIQNES

Specific function: This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction

COG id: COG0712

COG function: function code C; F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase delta chain family

Homologues:

Organism=Escherichia coli, GI1790173, Length=172, Percent_Identity=25, Blast_Score=75, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24647054, Length=169, Percent_Identity=28.9940828402367, Blast_Score=69, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPD_HALOH (B8CZ13)

Other databases:

- EMBL:   CP001098
- RefSeq:   YP_002509527.1
- ProteinModelPortal:   B8CZ13
- SMR:   B8CZ13
- GeneID:   7313781
- GenomeReviews:   CP001098_GR
- KEGG:   hor:Hore_17830
- HOGENOM:   HBG668108
- OMA:   SIGDKYV
- HAMAP:   MF_01416
- InterPro:   IPR000711
- Gene3D:   G3DSA:1.10.520.20
- PANTHER:   PTHR11910
- PRINTS:   PR00125
- TIGRFAMs:   TIGR01145

Pfam domain/function: PF00213 OSCP; SSF47928 ATPsynt_OSCP

EC number: 3.6.3.14

Molecular weight: Translated: 21978; Mature: 21978

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: PS00389 ATPASE_DELTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINNEVSRKYSSALLEVALESDNLSRFKEELEGISKALKQYDDLKKILYHPRVLPDDKKE
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
VIHQVFSDKVSEPVFNFLNLIVDKRREVYLDFIIRDFIKQANRKEGLVKIEVVSAIELSE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHH
KQREQLKNKLKKALNKKIELKTKIDPGIIGGIIIKIGDRLIDGSIKHQLDSIKESIEKIP
HHHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VTELGVIQNES
CHHHCCCCCCC
>Mature Secondary Structure
MINNEVSRKYSSALLEVALESDNLSRFKEELEGISKALKQYDDLKKILYHPRVLPDDKKE
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
VIHQVFSDKVSEPVFNFLNLIVDKRREVYLDFIIRDFIKQANRKEGLVKIEVVSAIELSE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHH
KQREQLKNKLKKALNKKIELKTKIDPGIIGGIIIKIGDRLIDGSIKHQLDSIKESIEKIP
HHHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VTELGVIQNES
CHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA