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The map label for this gene is atpF [H]

Identifier: 220932620

GI number: 220932620

Start: 1912244

End: 1912744

Strand: Reverse

Name: atpF [H]

Synonym: Hore_17840

Alternate gene names: 220932620

Gene position: 1912744-1912244 (Counterclockwise)

Preceding gene: 220932622

Following gene: 220932619

Centisome position: 74.19

GC content: 41.72

Gene sequence:

>501_bases
TTGGTAACAATTGATGAAAGACTTCTATGGCAGGTAGTAAACTTTTTGGTACTTATGTGGTTGTTAAAAAGGTTTTTATA
TGGACCTCTAACTGAGTTCCTGGATAAAAGGAGCCAGAAGATAAAAAATGAGCTAGACAGTGCGGCCCGGAAGAAGGAAG
AGGCCGACAAACTGAAAAAAGAGTATGAAAGTAAACTACAGCAGGCCCGTGATAAAGCCCAGGAGATTATTGAAGATGCT
GAAAAGAGGGCCCAGCAGAGGGCCGAAGAGATAATAGCTGAGGCCAGAGTAGAGGCGAAAAAGGTAAAGGAAAGGAATAT
GGAAGAGATAGCCCAGGCCAAACGGGATGCCCTTGATGAATTGCGGAAAGAAGTTGCTTCTATTTCCCTGATGGTAGCCG
GTAAGTTCATTAAAGAAAAAATAGATAAAAAACAGCAGGAAGCCTTGATAAATCAATATATTGAGAACCTGGATCAGGAG
AAGATAGGTGAACTGCAATGA

Upstream 100 bases:

>100_bases
TAAAGACCAGTATAATTTCATGTAGGGAGAATAATTCTAATTTTATATAGATTATTATAGACAATTATAAACAGAAGAGT
ATTGACAGGAGGTGAACCAC

Downstream 100 bases:

>100_bases
TTAATAATGAGGTTTCCAGAAAGTATAGTAGTGCTCTATTAGAAGTTGCCCTGGAGAGTGATAATCTTTCCAGATTTAAA
GAGGAACTTGAGGGGATTAG

Product: ATP synthase F0 subunit B

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b [H]

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MVTIDERLLWQVVNFLVLMWLLKRFLYGPLTEFLDKRSQKIKNELDSAARKKEEADKLKKEYESKLQQARDKAQEIIEDA
EKRAQQRAEEIIAEARVEAKKVKERNMEEIAQAKRDALDELRKEVASISLMVAGKFIKEKIDKKQQEALINQYIENLDQE
KIGELQ

Sequences:

>Translated_166_residues
MVTIDERLLWQVVNFLVLMWLLKRFLYGPLTEFLDKRSQKIKNELDSAARKKEEADKLKKEYESKLQQARDKAQEIIEDA
EKRAQQRAEEIIAEARVEAKKVKERNMEEIAQAKRDALDELRKEVASISLMVAGKFIKEKIDKKQQEALINQYIENLDQE
KIGELQ
>Mature_166_residues
MVTIDERLLWQVVNFLVLMWLLKRFLYGPLTEFLDKRSQKIKNELDSAARKKEEADKLKKEYESKLQQARDKAQEIIEDA
EKRAQQRAEEIIAEARVEAKKVKERNMEEIAQAKRDALDELRKEVASISLMVAGKFIKEKIDKKQQEALINQYIENLDQE
KIGELQ

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) [H]

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family [H]

Homologues:

Organism=Escherichia coli, GI1790174, Length=156, Percent_Identity=28.8461538461538, Blast_Score=66, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002146
- InterPro:   IPR005864 [H]

Pfam domain/function: PF00430 ATP-synt_B [H]

EC number: 3.6.3.14

Molecular weight: Translated: 19561; Mature: 19561

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTIDERLLWQVVNFLVLMWLLKRFLYGPLTEFLDKRSQKIKNELDSAARKKEEADKLKK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EYESKLQQARDKAQEIIEDAEKRAQQRAEEIIAEARVEAKKVKERNMEEIAQAKRDALDE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
LRKEVASISLMVAGKFIKEKIDKKQQEALINQYIENLDQEKIGELQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCC
>Mature Secondary Structure
MVTIDERLLWQVVNFLVLMWLLKRFLYGPLTEFLDKRSQKIKNELDSAARKKEEADKLKK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EYESKLQQARDKAQEIIEDAEKRAQQRAEEIIAEARVEAKKVKERNMEEIAQAKRDALDE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
LRKEVASISLMVAGKFIKEKIDKKQQEALINQYIENLDQEKIGELQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10510230 [H]