| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
Click here to switch to the map view.
The map label for this gene is lpxA [H]
Identifier: 220932591
GI number: 220932591
Start: 1876528
End: 1877337
Strand: Reverse
Name: lpxA [H]
Synonym: Hore_17550
Alternate gene names: 220932591
Gene position: 1877337-1876528 (Counterclockwise)
Preceding gene: 220932592
Following gene: 220932590
Centisome position: 72.82
GC content: 43.7
Gene sequence:
>810_bases GTGAAACCTAAGCATGAAGGAAAACTTCTTCATATGGCCAAGATTCATGAGACTGCCATTGTGCATCCCGGTGCCAAAAT CGGCAAAAATGTTGAGATCGGGCCATATTCTATAATTGGAGAAAATGTTGAAATCGGTGAGGGGACCAAAATAGGCCCCC ATGTTGTCGTTGAAGGCTGGACAACCATTGGCAAGAATAATCAAATCTTCCACGGGGCTTCTATTGGTCTAGAACCCCAG GATATGAAATTTAAAGGAGAAAAAAGCTATCTATTTATTGGAGATAACAATATAATCAGGGAAAATGTAACCATTCACCG GGGTACCGAAGAGGGGGGCGGCGAGACCAGGATTGGTAATAATAACCTGATAATGGCTTATTGCCATGTAGCCCATGACT GTCAACTCGGAAACCATATAATTATGTCCAATGCTACCAATCTGGCCGGGCATGTTATTATAGAGGACTATGTTGTTATG TCTGGTTTGACCGGGGTTCATCAGTTTGTAAGAGTCGGAAAAATGGCCATGGTCGGGGCCCATTCCAAGGTTGTTAAAGA TGTGCCTCCATATATTCTTGTTGATGGACATCCGGCCCGGGTTAATGGTATCAATGTAGTTGGCCTGCGGAGAAATGGGG TTGACCCTGATTTGAGACAGGAAATTAAAAGGGCCTATAAAATTCTCTACCGTTCCAATCTCAATACTTCCCAGGCCATT GAAAAGATGGATCAGGAACTGGATGCCAGTGAAGAAATTGAACACTTTTTAAGGTTTTTACGTAATGCCCAGCGCGGGAT TTGCCGTTAG
Upstream 100 bases:
>100_bases TCGGCAAGATTGCAGCTAAAGGTTTTGTTGAGGATGAATTAGCAGCTGAGGCTGAATTAATGTTTGCTATAAATGATAAG TAGAAAGGGGCTTGGTAGGT
Downstream 100 bases:
>100_bases GTGGGTGGTCAAAGATGTCAAAAATAGGTTTAATTGCCGGCAGGGGTAAATTGCCTGCCATCTGGGCTGCAAGTGCGCGG GACCGGGGACATGATGTTTA
Product: acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase
Products: NA
Alternate protein names: UDP-N-acetylglucosamine acyltransferase [H]
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MKPKHEGKLLHMAKIHETAIVHPGAKIGKNVEIGPYSIIGENVEIGEGTKIGPHVVVEGWTTIGKNNQIFHGASIGLEPQ DMKFKGEKSYLFIGDNNIIRENVTIHRGTEEGGGETRIGNNNLIMAYCHVAHDCQLGNHIIMSNATNLAGHVIIEDYVVM SGLTGVHQFVRVGKMAMVGAHSKVVKDVPPYILVDGHPARVNGINVVGLRRNGVDPDLRQEIKRAYKILYRSNLNTSQAI EKMDQELDASEEIEHFLRFLRNAQRGICR
Sequences:
>Translated_269_residues MKPKHEGKLLHMAKIHETAIVHPGAKIGKNVEIGPYSIIGENVEIGEGTKIGPHVVVEGWTTIGKNNQIFHGASIGLEPQ DMKFKGEKSYLFIGDNNIIRENVTIHRGTEEGGGETRIGNNNLIMAYCHVAHDCQLGNHIIMSNATNLAGHVIIEDYVVM SGLTGVHQFVRVGKMAMVGAHSKVVKDVPPYILVDGHPARVNGINVVGLRRNGVDPDLRQEIKRAYKILYRSNLNTSQAI EKMDQELDASEEIEHFLRFLRNAQRGICR >Mature_269_residues MKPKHEGKLLHMAKIHETAIVHPGAKIGKNVEIGPYSIIGENVEIGEGTKIGPHVVVEGWTTIGKNNQIFHGASIGLEPQ DMKFKGEKSYLFIGDNNIIRENVTIHRGTEEGGGETRIGNNNLIMAYCHVAHDCQLGNHIIMSNATNLAGHVIIEDYVVM SGLTGVHQFVRVGKMAMVGAHSKVVKDVPPYILVDGHPARVNGINVVGLRRNGVDPDLRQEIKRAYKILYRSNLNTSQAI EKMDQELDASEEIEHFLRFLRNAQRGICR
Specific function: Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell [H]
COG id: COG1043
COG function: function code M; Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family. LpxA subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786378, Length=257, Percent_Identity=45.5252918287938, Blast_Score=238, Evalue=2e-64,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001451 - InterPro: IPR010137 - InterPro: IPR011004 [H]
Pfam domain/function: PF00132 Hexapep [H]
EC number: =2.3.1.129 [H]
Molecular weight: Translated: 29775; Mature: 29775
Theoretical pI: Translated: 8.16; Mature: 8.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPKHEGKLLHMAKIHETAIVHPGAKIGKNVEIGPYSIIGENVEIGEGTKIGPHVVVEGW CCCCCCCCEEEEEEHHHHEEECCCHHHCCCCCCCCEEEECCCEEECCCCCCCCEEEEECE TTIGKNNQIFHGASIGLEPQDMKFKGEKSYLFIGDNNIIRENVTIHRGTEEGGGETRIGN EEECCCCEEEECCCCCCCCCCCEECCCCCEEEECCCCEEECCEEEEECCCCCCCCEEECC NNLIMAYCHVAHDCQLGNHIIMSNATNLAGHVIIEDYVVMSGLTGVHQFVRVGKMAMVGA CCEEEEEEEECCCCCCCCEEEEECCCCCCEEEEEHHHHHHHCCHHHHHHHHHHHHHEECC HSKVVKDVPPYILVDGHPARVNGINVVGLRRNGVDPDLRQEIKRAYKILYRSNLNTSQAI CHHHHHCCCCEEEECCCCCEECCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHH EKMDQELDASEEIEHFLRFLRNAQRGICR HHHHHHCCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKPKHEGKLLHMAKIHETAIVHPGAKIGKNVEIGPYSIIGENVEIGEGTKIGPHVVVEGW CCCCCCCCEEEEEEHHHHEEECCCHHHCCCCCCCCEEEECCCEEECCCCCCCCEEEEECE TTIGKNNQIFHGASIGLEPQDMKFKGEKSYLFIGDNNIIRENVTIHRGTEEGGGETRIGN EEECCCCEEEECCCCCCCCCCCEECCCCCEEEECCCCEEECCEEEEECCCCCCCCEEECC NNLIMAYCHVAHDCQLGNHIIMSNATNLAGHVIIEDYVVMSGLTGVHQFVRVGKMAMVGA CCEEEEEEEECCCCCCCCEEEEECCCCCCEEEEEHHHHHHHCCHHHHHHHHHHHHHEECC HSKVVKDVPPYILVDGHPARVNGINVVGLRRNGVDPDLRQEIKRAYKILYRSNLNTSQAI CHHHHHCCCCEEEECCCCCEECCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHH EKMDQELDASEEIEHFLRFLRNAQRGICR HHHHHHCCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA