| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220932590
Identifier: 220932590
GI number: 220932590
Start: 1875695
End: 1876513
Strand: Reverse
Name: 220932590
Synonym: Hore_17540
Alternate gene names: NA
Gene position: 1876513-1875695 (Counterclockwise)
Preceding gene: 220932591
Following gene: 220932589
Centisome position: 72.79
GC content: 44.44
Gene sequence:
>819_bases ATGTCAAAAATAGGTTTAATTGCCGGCAGGGGTAAATTGCCTGCCATCTGGGCTGCAAGTGCGCGGGACCGGGGACATGA TGTTTATGCCTTCCCCATTATCGAAGAGGCTGATGAAGGTTTGAAAAATATAGCTAAGGTTATAAAACCGGTTAATGTCG GTGCATTTGATAACCTTATTAATATTTTAATAGAGAATGATATAAGTAAAGTGGTAATGATCGGGAAGGTTAATAAGACC AGGCTTTTTGGTAAAACCCGGTTGGATGCAAGAATGCAACAGATGCTGGCAAACCTCAGGGAATTGAATGATGATAGCAT TCTTTTAGGAATAGTTAATGAACTAAAAAAGGAAGGGATAGAGGTCTTAAAACAGTCCACTTTTATAGAAGACTTGTTCC CAACTCCGGGACCGGTAACCTCTAAAACCCCGGATGATTCCCTTCTGGAAGATATGAAATATGCTTTCAAACTGGCCCGT GGTATTGGAGGGCTTGATATCGGGCAGACTGTCCTCGTCAAAAATAGAGCGGTTCTGGCTGTTGAGGCTATTGAAGGAAC CGATCAGGCTATAAAACGGGCCGGGGAGCTGGGTGGAGCCGGGGCTACCATGGCCAAGGTGAGCAAGCCCAATCAGGATT TCAGGTTTGATATTCCGACGGTGGGATTAACCACCCTCAGGAATCTTATAAAAATTAAGGCCCGGGGTTTAGTTATTGAG GCCGGTAAAACATTTATTGTCGACAGGGAAGAATTTATTGAAACGGCGGAGGCCAGTGGAATTACCGTTATGGCTTTAGA GTCTGCCTCCCCTGAATAA
Upstream 100 bases:
>100_bases AGATGGATCAGGAACTGGATGCCAGTGAAGAAATTGAACACTTTTTAAGGTTTTTACGTAATGCCCAGCGCGGGATTTGC CGTTAGGTGGGTGGTCAAAG
Downstream 100 bases:
>100_bases GGTGGTGAGTAATCTTTGGGCAAAATAATGGTAGTAGCCGGAGAAGTCTCTGGTGATATGCATGCAGCCAGGGTGGTCCG GGAAATTAAAAAATTAGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 272; Mature: 271
Protein sequence:
>272_residues MSKIGLIAGRGKLPAIWAASARDRGHDVYAFPIIEEADEGLKNIAKVIKPVNVGAFDNLINILIENDISKVVMIGKVNKT RLFGKTRLDARMQQMLANLRELNDDSILLGIVNELKKEGIEVLKQSTFIEDLFPTPGPVTSKTPDDSLLEDMKYAFKLAR GIGGLDIGQTVLVKNRAVLAVEAIEGTDQAIKRAGELGGAGATMAKVSKPNQDFRFDIPTVGLTTLRNLIKIKARGLVIE AGKTFIVDREEFIETAEASGITVMALESASPE
Sequences:
>Translated_272_residues MSKIGLIAGRGKLPAIWAASARDRGHDVYAFPIIEEADEGLKNIAKVIKPVNVGAFDNLINILIENDISKVVMIGKVNKT RLFGKTRLDARMQQMLANLRELNDDSILLGIVNELKKEGIEVLKQSTFIEDLFPTPGPVTSKTPDDSLLEDMKYAFKLAR GIGGLDIGQTVLVKNRAVLAVEAIEGTDQAIKRAGELGGAGATMAKVSKPNQDFRFDIPTVGLTTLRNLIKIKARGLVIE AGKTFIVDREEFIETAEASGITVMALESASPE >Mature_271_residues SKIGLIAGRGKLPAIWAASARDRGHDVYAFPIIEEADEGLKNIAKVIKPVNVGAFDNLINILIENDISKVVMIGKVNKTR LFGKTRLDARMQQMLANLRELNDDSILLGIVNELKKEGIEVLKQSTFIEDLFPTPGPVTSKTPDDSLLEDMKYAFKLARG IGGLDIGQTVLVKNRAVLAVEAIEGTDQAIKRAGELGGAGATMAKVSKPNQDFRFDIPTVGLTTLRNLIKIKARGLVIEA GKTFIVDREEFIETAEASGITVMALESASPE
Specific function: Unknown
COG id: COG3494
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29470; Mature: 29338
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKIGLIAGRGKLPAIWAASARDRGHDVYAFPIIEEADEGLKNIAKVIKPVNVGAFDNLI CCCCEEEECCCCCCEEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCHHHHHH NILIENDISKVVMIGKVNKTRLFGKTRLDARMQQMLANLRELNDDSILLGIVNELKKEGI HHHHHCCCCEEEEEECCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHH EVLKQSTFIEDLFPTPGPVTSKTPDDSLLEDMKYAFKLARGIGGLDIGQTVLVKNRAVLA HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCEEEE VEAIEGTDQAIKRAGELGGAGATMAKVSKPNQDFRFDIPTVGLTTLRNLIKIKARGLVIE EEECCCHHHHHHHHHHCCCCCCHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHCCEEEE AGKTFIVDREEFIETAEASGITVMALESASPE CCCEEEECHHHHHHHHCCCCEEEEEECCCCCC >Mature Secondary Structure SKIGLIAGRGKLPAIWAASARDRGHDVYAFPIIEEADEGLKNIAKVIKPVNVGAFDNLI CCCEEEECCCCCCEEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCHHHHHH NILIENDISKVVMIGKVNKTRLFGKTRLDARMQQMLANLRELNDDSILLGIVNELKKEGI HHHHHCCCCEEEEEECCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHH EVLKQSTFIEDLFPTPGPVTSKTPDDSLLEDMKYAFKLARGIGGLDIGQTVLVKNRAVLA HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCEEEE VEAIEGTDQAIKRAGELGGAGATMAKVSKPNQDFRFDIPTVGLTTLRNLIKIKARGLVIE EEECCCHHHHHHHHHHCCCCCCHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHCCEEEE AGKTFIVDREEFIETAEASGITVMALESASPE CCCEEEECHHHHHHHHCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA