| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220932559
Identifier: 220932559
GI number: 220932559
Start: 1839063
End: 1839800
Strand: Reverse
Name: 220932559
Synonym: Hore_17230
Alternate gene names: NA
Gene position: 1839800-1839063 (Counterclockwise)
Preceding gene: 220932561
Following gene: 220932558
Centisome position: 71.36
GC content: 37.8
Gene sequence:
>738_bases TTGAGGCAAAGTGGTTTAATAATTTTAATAGTTGTCATAAGTTTAAGTGTAGTTATAAATCCGGTGATTGCTGGTAATGT TGCCCAGAAACTGACAGAACCCCCTCTCAAAACCTTAGATTTAAATACTTATGAAAATAAAGCTCCGGGAGTAAAGCTAA TAAAATTACGGGAACTTGGCCGGTATTATGGCTGGGTTATTGGTTATATTCCTTCCCGGAAGACGGTTACAATAATGGCT AATGGTAAACGATTGTATATAGATATCCGGGAGGGGGAGCTAAATGATGTAAAGCTTGATAATCCCCCTGTTATAGAGGA AGGTCGCACTTATTTTAATTTAAAATTAACAACGAAAATCCTCAACCACATTTACGGTGAAAGGCCCCGGTTAATGGCTA AACTGGACCTTGAGAAAAAGGAATATCACACCGGTGAGATGCTAAAGGCCAAACTGGTAATTTTGAATTTGTCGGTTAGA CCTTTAAATTTAACCTTTAATTCAGGTAAAAAATACGACCTGGTACTTTATAAAGCTGGCAAAGAGGTTAAGCGCTGGTC CCGGGGTAAATTCTTTACCATGGCCCTTGAGAAGATAAGTCTGAAACCAGGTGAAAACAAGGTTTACAGGATAGAAATGT TGCTTGATGATATTGAACCCGGTAATTATTATGTAAATGCTGAACTGGCTACAAATCCGGTAACTGGTTTTAATGGAGTT GAAATTAAGATTGAGTAG
Upstream 100 bases:
>100_bases TATTAGTCCTTTTACCAGATAATGACAGCAGGTTTCAGAGGATTCTTCAAGAATTATTATATTATAAAACAGGGTAAAAA ATAAATGGGGTGAATAGATA
Downstream 100 bases:
>100_bases ATTGCGACAAAAGAGCTATTTATTGTAAACTTCAGGGGAATCCAGGGCCTGCAAGGGGCACCTGGATTTTTCTTGTTGGT CTGGTTATAATATTTAGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MRQSGLIILIVVISLSVVINPVIAGNVAQKLTEPPLKTLDLNTYENKAPGVKLIKLRELGRYYGWVIGYIPSRKTVTIMA NGKRLYIDIREGELNDVKLDNPPVIEEGRTYFNLKLTTKILNHIYGERPRLMAKLDLEKKEYHTGEMLKAKLVILNLSVR PLNLTFNSGKKYDLVLYKAGKEVKRWSRGKFFTMALEKISLKPGENKVYRIEMLLDDIEPGNYYVNAELATNPVTGFNGV EIKIE
Sequences:
>Translated_245_residues MRQSGLIILIVVISLSVVINPVIAGNVAQKLTEPPLKTLDLNTYENKAPGVKLIKLRELGRYYGWVIGYIPSRKTVTIMA NGKRLYIDIREGELNDVKLDNPPVIEEGRTYFNLKLTTKILNHIYGERPRLMAKLDLEKKEYHTGEMLKAKLVILNLSVR PLNLTFNSGKKYDLVLYKAGKEVKRWSRGKFFTMALEKISLKPGENKVYRIEMLLDDIEPGNYYVNAELATNPVTGFNGV EIKIE >Mature_245_residues MRQSGLIILIVVISLSVVINPVIAGNVAQKLTEPPLKTLDLNTYENKAPGVKLIKLRELGRYYGWVIGYIPSRKTVTIMA NGKRLYIDIREGELNDVKLDNPPVIEEGRTYFNLKLTTKILNHIYGERPRLMAKLDLEKKEYHTGEMLKAKLVILNLSVR PLNLTFNSGKKYDLVLYKAGKEVKRWSRGKFFTMALEKISLKPGENKVYRIEMLLDDIEPGNYYVNAELATNPVTGFNGV EIKIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27909; Mature: 27909
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQSGLIILIVVISLSVVINPVIAGNVAQKLTEPPLKTLDLNTYENKAPGVKLIKLRELG CCCCCEEEEEEHHHHHHHHHHHHCCHHHHHHCCCCCCEEECCCCCCCCCCEEEEEEHHHH RYYGWVIGYIPSRKTVTIMANGKRLYIDIREGELNDVKLDNPPVIEEGRTYFNLKLTTKI HHHCEEEEEECCCCEEEEEECCCEEEEEEECCCCCEEECCCCCCCCCCCEEEEEEEHHHH LNHIYGERPRLMAKLDLEKKEYHTGEMLKAKLVILNLSVRPLNLTFNSGKKYDLVLYKAG HHHHHCCCCCEEEEECCCHHHCCCCCCEEEEEEEEEEEEEEEEEEECCCCEEEEEEEECC KEVKRWSRGKFFTMALEKISLKPGENKVYRIEMLLDDIEPGNYYVNAELATNPVTGFNGV CHHHHHCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCCCCEEEEEEEECCCCCCCCCE EIKIE EEEEC >Mature Secondary Structure MRQSGLIILIVVISLSVVINPVIAGNVAQKLTEPPLKTLDLNTYENKAPGVKLIKLRELG CCCCCEEEEEEHHHHHHHHHHHHCCHHHHHHCCCCCCEEECCCCCCCCCCEEEEEEHHHH RYYGWVIGYIPSRKTVTIMANGKRLYIDIREGELNDVKLDNPPVIEEGRTYFNLKLTTKI HHHCEEEEEECCCCEEEEEECCCEEEEEEECCCCCEEECCCCCCCCCCCEEEEEEEHHHH LNHIYGERPRLMAKLDLEKKEYHTGEMLKAKLVILNLSVRPLNLTFNSGKKYDLVLYKAG HHHHHCCCCCEEEEECCCHHHCCCCCCEEEEEEEEEEEEEEEEEEECCCCEEEEEEEECC KEVKRWSRGKFFTMALEKISLKPGENKVYRIEMLLDDIEPGNYYVNAELATNPVTGFNGV CHHHHHCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCCCCEEEEEEEECCCCCCCCCE EIKIE EEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA