| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220932427
Identifier: 220932427
GI number: 220932427
Start: 1704414
End: 1705205
Strand: Reverse
Name: 220932427
Synonym: Hore_15910
Alternate gene names: NA
Gene position: 1705205-1704414 (Counterclockwise)
Preceding gene: 220932428
Following gene: 220932426
Centisome position: 66.14
GC content: 36.36
Gene sequence:
>792_bases ATGAAGTACAGGGAGTATTTTATCAATCCATTTGTGGTTGGAGCTGTTTTTGGTATAATAACAGGAAACCCTTCCCTGGG TCTGGTTGTTGCCGGGTTTACAGCCCTTATATGGGGTCTGGAACCGGGCATGAATTTTATTACCCTGACTACTATTTTAC TGGTCATTTTAACCGGTAATATTAATATGGAACTCATTTTTTTATACTCGCTGACCCTGGCCTATTTTATAAGGGAGGGT AAAGTATTAAAAATTCTTGATAAAAAAACAGCCTATGTTCTGTTGTTTTTTATATCAACAGGGTGTTATTTTCTATGGAA GTTTATACTGGGTTTAATTCCGGTTCAGCTTCTAAATGAAATTAATATTTCCGGGGAAATATTACTTACTGCCGGATTGC TTCTGTCTTTTGTCCGGGGTAAAGAATTGATCGGAGATAGTCCCCGGAAGTTTCTTAAGCATATTCTTGTTATATTAACA GCTGTTATAGCCATAAAGGGAAGCTGGTTTTTTGTAGGGGCGTGGTTTTTCGGTAATTTTATTCTTTCATATCTCATTTA CCATGATATTAAGTTTCAACCCCCTCCATTTTTTTTGCTGGGGGTGTTAGGGCTTTTAACCCTTATAGCAATATATTACC TTTTACCTTTAAATCCTGTAATTATATTAACATTTTTGACCGGTTCCATTTATTTTATTAAAAAATATCGGGAAAGGGTT CCTATTATGGAAACGGTTTATGTTGCCTTTTTTCTGGGGATACTCGCCGGACGAATGGGGTTGTTGAGTTAA
Upstream 100 bases:
>100_bases GATGGTAATAAGATATTAGCGGAGTCAAAATATATTGACAGGTATAATTCTCCCGGGTGCCGGAAATAATTAATACAAAA GCTACCCGGGGGGTGATTTT
Downstream 100 bases:
>100_bases TGAGGTTTATCGGTGATTATCATACCCACTCCCAATATAGTCATGGAAAAGGAGATTTAAGGGAAAATGTCGAAGAAGGT ATATTAAAGGGATTACAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MKYREYFINPFVVGAVFGIITGNPSLGLVVAGFTALIWGLEPGMNFITLTTILLVILTGNINMELIFLYSLTLAYFIREG KVLKILDKKTAYVLLFFISTGCYFLWKFILGLIPVQLLNEINISGEILLTAGLLLSFVRGKELIGDSPRKFLKHILVILT AVIAIKGSWFFVGAWFFGNFILSYLIYHDIKFQPPPFFLLGVLGLLTLIAIYYLLPLNPVIILTFLTGSIYFIKKYRERV PIMETVYVAFFLGILAGRMGLLS
Sequences:
>Translated_263_residues MKYREYFINPFVVGAVFGIITGNPSLGLVVAGFTALIWGLEPGMNFITLTTILLVILTGNINMELIFLYSLTLAYFIREG KVLKILDKKTAYVLLFFISTGCYFLWKFILGLIPVQLLNEINISGEILLTAGLLLSFVRGKELIGDSPRKFLKHILVILT AVIAIKGSWFFVGAWFFGNFILSYLIYHDIKFQPPPFFLLGVLGLLTLIAIYYLLPLNPVIILTFLTGSIYFIKKYRERV PIMETVYVAFFLGILAGRMGLLS >Mature_263_residues MKYREYFINPFVVGAVFGIITGNPSLGLVVAGFTALIWGLEPGMNFITLTTILLVILTGNINMELIFLYSLTLAYFIREG KVLKILDKKTAYVLLFFISTGCYFLWKFILGLIPVQLLNEINISGEILLTAGLLLSFVRGKELIGDSPRKFLKHILVILT AVIAIKGSWFFVGAWFFGNFILSYLIYHDIKFQPPPFFLLGVLGLLTLIAIYYLLPLNPVIILTFLTGSIYFIKKYRERV PIMETVYVAFFLGILAGRMGLLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29663; Mature: 29663
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYREYFINPFVVGAVFGIITGNPSLGLVVAGFTALIWGLEPGMNFITLTTILLVILTGN CCCHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC INMELIFLYSLTLAYFIREGKVLKILDKKTAYVLLFFISTGCYFLWKFILGLIPVQLLNE CCEEHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH INISGEILLTAGLLLSFVRGKELIGDSPRKFLKHILVILTAVIAIKGSWFFVGAWFFGNF CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH ILSYLIYHDIKFQPPPFFLLGVLGLLTLIAIYYLLPLNPVIILTFLTGSIYFIKKYRERV HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHC PIMETVYVAFFLGILAGRMGLLS CHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKYREYFINPFVVGAVFGIITGNPSLGLVVAGFTALIWGLEPGMNFITLTTILLVILTGN CCCHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC INMELIFLYSLTLAYFIREGKVLKILDKKTAYVLLFFISTGCYFLWKFILGLIPVQLLNE CCEEHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH INISGEILLTAGLLLSFVRGKELIGDSPRKFLKHILVILTAVIAIKGSWFFVGAWFFGNF CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH ILSYLIYHDIKFQPPPFFLLGVLGLLTLIAIYYLLPLNPVIILTFLTGSIYFIKKYRERV HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHC PIMETVYVAFFLGILAGRMGLLS CHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA